RNA–Protein interactions for RNA: ENST00000406454.7

CACNA1C-222, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,590 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-222ENST00000406454 SALL1Q9NSC2 1324 aa13.95□□□□□ -0.18
CACNA1C-222ENST00000406454 TADA2AO75478 443 aa13.95□□□□□ -0.18
CACNA1C-222ENST00000406454 ATXN8OSP0DMR3 200 aa13.95□□□□□ -0.18
CACNA1C-222ENST00000406454 KCNJ1P48048 391 aa13.95□□□□□ -0.18
CACNA1C-222ENST00000406454 POLE2P56282 527 aa13.95□□□□□ -0.18
CACNA1C-222ENST00000406454 ZNF200P98182 395 aaPredicted RBP13.95□□□□□ -0.18
CACNA1C-222ENST00000406454 KYNUQ16719 465 aa13.95□□□□□ -0.18
CACNA1C-222ENST00000406454 DCAF4L1Q3SXM0 396 aa13.95□□□□□ -0.18
CACNA1C-222ENST00000406454 CBWD2Q8IUF1 395 aa13.95□□□□□ -0.18
CACNA1C-222ENST00000406454 RNF217Q8TC41 542 aa13.95□□□□□ -0.18
CACNA1C-222ENST00000406454 ZSWIM1Q9BR11 485 aa13.95□□□□□ -0.18
CACNA1C-222ENST00000406454 ZFYVE1Q9HBF4 777 aa13.95□□□□□ -0.18
CACNA1C-222ENST00000406454 EIF3HO15372 352 aaKnown RBP eCLIP13.95□□□□□ -0.18
CACNA1C-222ENST00000406454 E2F6O75461 281 aa13.95□□□□□ -0.18
CACNA1C-222ENST00000406454 SETSIPP0DME0 302 aa13.95□□□□□ -0.18
CACNA1C-222ENST00000406454 MAPRE2Q15555 327 aa13.95□□□□□ -0.18
CACNA1C-222ENST00000406454 PDCD2Q16342 344 aaPredicted RBP13.95□□□□□ -0.18
CACNA1C-222ENST00000406454 SPAG6O75602 509 aa13.95□□□□□ -0.18
CACNA1C-222ENST00000406454 PCSK1P29120 753 aa13.95□□□□□ -0.18
CACNA1C-222ENST00000406454 LBRQ14739 615 aaKnown RBP13.95□□□□□ -0.18
CACNA1C-222ENST00000406454 ANO4Q32M45 955 aa13.95□□□□□ -0.18
CACNA1C-222ENST00000406454 AGR3Q8TD06 166 aa13.95□□□□□ -0.18
CACNA1C-222ENST00000406454 RBP3P10745 1247 aa13.95□□□□□ -0.18
CACNA1C-222ENST00000406454 AP2B1P63010 937 aa13.95□□□□□ -0.18
CACNA1C-222ENST00000406454 EFHC1Q5JVL4 640 aa13.95□□□□□ -0.18
CACNA1C-222ENST00000406454 TTC23LQ6PF05 361 aa13.95□□□□□ -0.18
CACNA1C-222ENST00000406454 DDIASQ8IXT1 998 aa13.95□□□□□ -0.18
CACNA1C-222ENST00000406454 NRBF2Q96F24 287 aa13.95□□□□□ -0.18
CACNA1C-222ENST00000406454 FOXN3O00409 490 aaPredicted RBP13.94□□□□□ -0.18
CACNA1C-222ENST00000406454 UGP2Q16851 508 aa13.94□□□□□ -0.18
CACNA1C-222ENST00000406454 CDR2LQ86X02 465 aaPredicted RBP13.94□□□□□ -0.18
CACNA1C-222ENST00000406454 SLC13A5Q86YT5 568 aaPredicted RBP13.94□□□□□ -0.18
CACNA1C-222ENST00000406454 PARP9Q8IXQ6 854 aa13.94□□□□□ -0.18
CACNA1C-222ENST00000406454 DCP1BQ8IZD4 617 aaKnown RBP13.94□□□□□ -0.18
CACNA1C-222ENST00000406454 FBXL16Q8N461 479 aa13.94□□□□□ -0.18
CACNA1C-222ENST00000406454 CXorf38Q8TB03 319 aa13.94□□□□□ -0.18
CACNA1C-222ENST00000406454 SPATA18Q8TC71 538 aa13.94□□□□□ -0.18
CACNA1C-222ENST00000406454 FUCA2Q9BTY2 467 aa13.94□□□□□ -0.18
CACNA1C-222ENST00000406454 SPATS2LQ9NUQ6 558 aaKnown RBP13.94□□□□□ -0.18
CACNA1C-222ENST00000406454 ITGB3P05106 788 aa13.94□□□□□ -0.18
CACNA1C-222ENST00000406454 PDK1Q15118 436 aa13.94□□□□□ -0.18
CACNA1C-222ENST00000406454 NOTUMQ6P988 496 aa13.94□□□□□ -0.18
CACNA1C-222ENST00000406454 KCNV2Q8TDN2 545 aa13.94□□□□□ -0.18
CACNA1C-222ENST00000406454 ARL8AQ96BM9 186 aa13.94□□□□□ -0.18
CACNA1C-222ENST00000406454 TRIM54Q9BYV2 358 aa13.94□□□□□ -0.18
CACNA1C-222ENST00000406454 OGTO15294 1046 aa13.94□□□□□ -0.18
CACNA1C-222ENST00000406454 ARHGDIAP52565 204 aa13.94□□□□□ -0.18
CACNA1C-222ENST00000406454 CUL3Q13618 768 aa13.94□□□□□ -0.18
CACNA1C-222ENST00000406454 CYP4A22Q5TCH4 519 aa13.94□□□□□ -0.18
CACNA1C-222ENST00000406454 RPAINQ86UA6 219 aa13.94□□□□□ -0.18
CACNA1C-222ENST00000406454 CCT8L2Q96SF2 557 aa13.94□□□□□ -0.18
CACNA1C-222ENST00000406454 EHD2Q9NZN4 543 aa13.94□□□□□ -0.18
CACNA1C-222ENST00000406454 MEFVO15553 781 aaPredicted RBP13.94□□□□□ -0.18
CACNA1C-222ENST00000406454 CASP4P49662 377 aa13.94□□□□□ -0.18
CACNA1C-222ENST00000406454 CAPRIN1Q14444 709 aaKnown RBP13.94□□□□□ -0.18
CACNA1C-222ENST00000406454 EML4Q9HC35 981 aaKnown RBP13.94□□□□□ -0.18
CACNA1C-222ENST00000406454 FAM47DPA6NHR8 397 aa13.94□□□□□ -0.18
CACNA1C-222ENST00000406454 TMCC1O94876 653 aa13.94□□□□□ -0.18
CACNA1C-222ENST00000406454 SGPL1O95470 568 aa13.94□□□□□ -0.18
CACNA1C-222ENST00000406454 MKRN4PQ13434 485 aaPredicted RBP13.94□□□□□ -0.18
CACNA1C-222ENST00000406454 SMTNL2Q2TAL5 461 aa13.94□□□□□ -0.18
CACNA1C-222ENST00000406454 KIDINS220Q9ULH0 1771 aa13.94□□□□□ -0.18
CACNA1C-222ENST00000406454 SUPT20HL2P0C7V6 817 aa13.94□□□□□ -0.18
CACNA1C-222ENST00000406454 PNPLA4P41247 253 aa13.94□□□□□ -0.18
CACNA1C-222ENST00000406454 DCCP43146 1447 aa13.94□□□□□ -0.18
CACNA1C-222ENST00000406454 NLRP11P59045 1033 aaKnown RBP13.94□□□□□ -0.18
CACNA1C-222ENST00000406454 EZH2Q15910 746 aaKnown RBP13.94□□□□□ -0.18
CACNA1C-222ENST00000406454 CDKAL1Q5VV42 579 aa13.94□□□□□ -0.18
CACNA1C-222ENST00000406454 CENPKQ9BS16 269 aa13.94□□□□□ -0.18
CACNA1C-222ENST00000406454 TSSK1BQ9BXA7 367 aa13.94□□□□□ -0.18
CACNA1C-222ENST00000406454 PIDD1Q9HB75 910 aa13.94□□□□□ -0.18
CACNA1C-222ENST00000406454 AFF4Q9UHB7 1163 aaKnown RBP13.94□□□□□ -0.18
CACNA1C-222ENST00000406454 TSR3Q9UJK0 312 aaKnown RBP13.94□□□□□ -0.18
CACNA1C-222ENST00000406454 UBQLN1Q9UMX0 589 aaKnown RBP13.94□□□□□ -0.18
CACNA1C-222ENST00000406454 KCNA2P16389 499 aa13.93□□□□□ -0.18
CACNA1C-222ENST00000406454 GNL1P36915 607 aaPredicted RBP13.93□□□□□ -0.18
CACNA1C-222ENST00000406454 NPTX2P47972 431 aa13.93□□□□□ -0.18
CACNA1C-222ENST00000406454 TAF6P49848 677 aa13.93□□□□□ -0.18
CACNA1C-222ENST00000406454 PTK7Q13308 1070 aa13.93□□□□□ -0.18
CACNA1C-222ENST00000406454 RBBP7Q16576 425 aa13.93□□□□□ -0.18
CACNA1C-222ENST00000406454 SLC7A14Q8TBB6 771 aa13.93□□□□□ -0.18
CACNA1C-222ENST00000406454 HMBSP08397 361 aa13.93□□□□□ -0.18
CACNA1C-222ENST00000406454 FNTAP49354 379 aa13.93□□□□□ -0.18
CACNA1C-222ENST00000406454 CENPPQ6IPU0 288 aa13.93□□□□□ -0.18
CACNA1C-222ENST00000406454 RMDN2Q96LZ7 410 aa13.93□□□□□ -0.18
CACNA1C-222ENST00000406454 TNS2Q63HR2 1409 aa13.93□□□□□ -0.18
CACNA1C-222ENST00000406454 STX3Q13277 289 aa13.93□□□□□ -0.18
CACNA1C-222ENST00000406454 SEZ6Q53EL9 994 aa13.93□□□□□ -0.18
CACNA1C-222ENST00000406454 C3orf67Q6ZVT6 689 aa13.93□□□□□ -0.18
CACNA1C-222ENST00000406454 NWD1Q149M9 1564 aa13.93□□□□□ -0.18
CACNA1C-222ENST00000406454 PHF20L1A8MW92 1017 aa13.93□□□□□ -0.18
CACNA1C-222ENST00000406454 BACE1P56817 501 aa13.93□□□□□ -0.18
CACNA1C-222ENST00000406454 RANBP17Q9H2T7 1088 aaKnown RBP13.93□□□□□ -0.18
CACNA1C-222ENST00000406454 L2HGDHQ9H9P8 463 aa13.93□□□□□ -0.18
CACNA1C-222ENST00000406454 NAMPTP43490 491 aa13.93□□□□□ -0.18
CACNA1C-222ENST00000406454 ACTN3Q08043 901 aaPredicted RBP13.93□□□□□ -0.18
CACNA1C-222ENST00000406454 HNRNPLLQ8WVV9 542 aaKnown RBP13.93□□□□□ -0.18
CACNA1C-222ENST00000406454 CBWD1Q9BRT8 395 aa13.93□□□□□ -0.18
CACNA1C-222ENST00000406454 USP10Q14694 798 aaKnown RBP13.92□□□□□ -0.18
CACNA1C-222ENST00000406454 SNX17Q15036 470 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms