RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 PDK1Q15118 436 aa12.59□□□□□ -0.39
SMCR8-201ENST00000406438 ARHGAP15Q53QZ3 475 aa12.59□□□□□ -0.39
SMCR8-201ENST00000406438 TRIM69Q86WT6 500 aa12.59□□□□□ -0.39
SMCR8-201ENST00000406438 KLC4Q9NSK0 619 aa12.59□□□□□ -0.39
SMCR8-201ENST00000406438 AGAP1Q9UPQ3 857 aa12.59□□□□□ -0.39
SMCR8-201ENST00000406438 MYH13Q9UKX3 1938 aa12.59□□□□□ -0.39
SMCR8-201ENST00000406438 FAM196BA6NMK8 535 aa12.59□□□□□ -0.39
SMCR8-201ENST00000406438 DGAT1O75907 488 aa12.59□□□□□ -0.39
SMCR8-201ENST00000406438 LARGE1O95461 756 aa12.59□□□□□ -0.39
SMCR8-201ENST00000406438 TRIM49P0CI25 452 aa12.59□□□□□ -0.39
SMCR8-201ENST00000406438 TRIM49CP0CI26 452 aa12.59□□□□□ -0.39
SMCR8-201ENST00000406438 GUCY1A2P33402 732 aa12.59□□□□□ -0.39
SMCR8-201ENST00000406438 CLK1P49759 484 aaKnown RBP12.59□□□□□ -0.39
SMCR8-201ENST00000406438 COG2Q14746 738 aa12.59□□□□□ -0.39
SMCR8-201ENST00000406438 RABGAP1LQ5R372 815 aa12.59□□□□□ -0.39
SMCR8-201ENST00000406438 DAB2IPQ5VWQ8 1189 aa12.59□□□□□ -0.39
SMCR8-201ENST00000406438 C3orf62Q6ZUJ4 267 aa12.59□□□□□ -0.39
SMCR8-201ENST00000406438 LINC00523Q86TU6 105 aa12.59□□□□□ -0.39
SMCR8-201ENST00000406438 KRT78Q8N1N4 520 aa12.59□□□□□ -0.39
SMCR8-201ENST00000406438 NT5C1AQ9BXI3 368 aa12.59□□□□□ -0.39
SMCR8-201ENST00000406438 EPN3Q9H201 632 aa12.59□□□□□ -0.39
SMCR8-201ENST00000406438 ALG13Q9NP73 1137 aaKnown RBP12.59□□□□□ -0.39
SMCR8-201ENST00000406438 CPVLQ9H3G5 476 aa12.59□□□□□ -0.39
SMCR8-201ENST00000406438 STN1Q9H668 368 aaKnown RBP12.59□□□□□ -0.39
SMCR8-201ENST00000406438 IMPAD1Q9NX62 359 aa12.59□□□□□ -0.39
SMCR8-201ENST00000406438 ZNF711Q9Y462 761 aa12.59□□□□□ -0.39
SMCR8-201ENST00000406438 TTC26A0AVF1 554 aa12.59□□□□□ -0.39
SMCR8-201ENST00000406438 PRR29P0C7W0 189 aa12.59□□□□□ -0.39
SMCR8-201ENST00000406438 ACOT2P49753 483 aa12.59□□□□□ -0.39
SMCR8-201ENST00000406438 HNRNPH2P55795 449 aaKnown RBP12.59□□□□□ -0.39
SMCR8-201ENST00000406438 SNAPC2Q13487 334 aa12.59□□□□□ -0.39
SMCR8-201ENST00000406438 CCDC92Q53HC0 331 aaPredicted RBP12.59□□□□□ -0.39
SMCR8-201ENST00000406438 LVRNQ6Q4G3 990 aa12.59□□□□□ -0.39
SMCR8-201ENST00000406438 SPATA4Q8NEY3 305 aa12.59□□□□□ -0.39
SMCR8-201ENST00000406438 SLC7A14Q8TBB6 771 aa12.59□□□□□ -0.39
SMCR8-201ENST00000406438 PRPF18Q99633 342 aaKnown RBP12.59□□□□□ -0.39
SMCR8-201ENST00000406438 PRG3Q9Y2Y8 225 aaPredicted RBP12.59□□□□□ -0.39
SMCR8-201ENST00000406438 NEU2Q9Y3R4 380 aa12.59□□□□□ -0.39
SMCR8-201ENST00000406438 TK2O00142 265 aa12.58□□□□□ -0.4
SMCR8-201ENST00000406438 PDXKO00764 312 aa12.58□□□□□ -0.4
SMCR8-201ENST00000406438 CDH16O75309 829 aa12.58□□□□□ -0.4
SMCR8-201ENST00000406438 RARBP10826 455 aa12.58□□□□□ -0.4
SMCR8-201ENST00000406438 CPT1AP50416 773 aa12.58□□□□□ -0.4
SMCR8-201ENST00000406438 SLC16A1P53985 500 aa12.58□□□□□ -0.4
SMCR8-201ENST00000406438 BYSLQ13895 437 aaKnown RBP12.58□□□□□ -0.4
SMCR8-201ENST00000406438 SPATA21Q7Z572 469 aa12.58□□□□□ -0.4
SMCR8-201ENST00000406438 ARMC2Q8NEN0 867 aa12.58□□□□□ -0.4
SMCR8-201ENST00000406438 MS4A14Q96JA4 679 aa12.58□□□□□ -0.4
SMCR8-201ENST00000406438 GOLPH3Q9H4A6 298 aa12.58□□□□□ -0.4
SMCR8-201ENST00000406438 GJB4Q9NTQ9 266 aa12.58□□□□□ -0.4
SMCR8-201ENST00000406438 TBC1D23Q9NUY8 699 aa12.58□□□□□ -0.4
SMCR8-201ENST00000406438 ERVK-7P63135 1459 aa12.58□□□□□ -0.4
SMCR8-201ENST00000406438 MTSS1O43312 755 aa12.58□□□□□ -0.4
SMCR8-201ENST00000406438 RGS2P41220 211 aa12.58□□□□□ -0.4
SMCR8-201ENST00000406438 SLITRK1Q96PX8 696 aa12.58□□□□□ -0.4
SMCR8-201ENST00000406438 UVRAGQ9P2Y5 699 aa12.58□□□□□ -0.4
SMCR8-201ENST00000406438 ABCA8O94911 1581 aa12.58□□□□□ -0.4
SMCR8-201ENST00000406438 ESYT3A0FGR9 886 aa12.58□□□□□ -0.4
SMCR8-201ENST00000406438 DDHD2O94830 711 aa12.58□□□□□ -0.4
SMCR8-201ENST00000406438 UPP2O95045 317 aa12.58□□□□□ -0.4
SMCR8-201ENST00000406438 SYCP2LQ5T4T6 812 aa12.58□□□□□ -0.4
SMCR8-201ENST00000406438 FMR1NBQ8N0W7 255 aaPredicted RBP12.58□□□□□ -0.4
SMCR8-201ENST00000406438 GTF3C2Q8WUA4 911 aaPredicted RBP12.58□□□□□ -0.4
SMCR8-201ENST00000406438 FAM47DPA6NHR8 397 aa12.58□□□□□ -0.4
SMCR8-201ENST00000406438 SPAG6O75602 509 aa12.58□□□□□ -0.4
SMCR8-201ENST00000406438 PGK2P07205 417 aa12.58□□□□□ -0.4
SMCR8-201ENST00000406438 SNRNP35Q16560 246 aaKnown RBP12.58□□□□□ -0.4
SMCR8-201ENST00000406438 HIST2H2ACQ16777 129 aaPredicted RBP12.58□□□□□ -0.4
SMCR8-201ENST00000406438 HIST2H2AA3Q6FI13 130 aa12.58□□□□□ -0.4
SMCR8-201ENST00000406438 TRAPPC11Q7Z392 1133 aa12.58□□□□□ -0.4
SMCR8-201ENST00000406438 DTX3LQ8TDB6 740 aa12.58□□□□□ -0.4
SMCR8-201ENST00000406438 SATB2Q9UPW6 733 aa12.58□□□□□ -0.4
SMCR8-201ENST00000406438 SNX9Q9Y5X1 595 aa12.58□□□□□ -0.4
SMCR8-201ENST00000406438 SPACA6W5XKT8 324 aa12.58□□□□□ -0.4
SMCR8-201ENST00000406438 HMBSP08397 361 aa12.58□□□□□ -0.4
SMCR8-201ENST00000406438 SPRP35270 261 aaPredicted RBP12.58□□□□□ -0.4
SMCR8-201ENST00000406438 ANXA11P50995 505 aaKnown RBP12.58□□□□□ -0.4
SMCR8-201ENST00000406438 PDIA5Q14554 519 aa12.58□□□□□ -0.4
SMCR8-201ENST00000406438 SCFD2Q8WU76 684 aa12.58□□□□□ -0.4
SMCR8-201ENST00000406438 KCNK16Q96T55 309 aa12.58□□□□□ -0.4
SMCR8-201ENST00000406438 TERF2Q15554 542 aa12.58□□□□□ -0.4
SMCR8-201ENST00000406438 GLB1LQ6UWU2 654 aa12.58□□□□□ -0.4
SMCR8-201ENST00000406438 EFL1Q7Z2Z2 1120 aaKnown RBP12.58□□□□□ -0.4
SMCR8-201ENST00000406438 FAM167BQ9BTA0 163 aa12.58□□□□□ -0.4
SMCR8-201ENST00000406438 SFSWAPQ12872 951 aaKnown RBP12.57□□□□□ -0.4
SMCR8-201ENST00000406438 DGKDQ16760 1214 aa12.57□□□□□ -0.4
SMCR8-201ENST00000406438 SGO1Q5FBB7 561 aa12.57□□□□□ -0.4
SMCR8-201ENST00000406438 ZRANB3Q5FWF4 1079 aa12.57□□□□□ -0.4
SMCR8-201ENST00000406438 CAPRIN2Q6IMN6 1127 aaKnown RBP12.57□□□□□ -0.4
SMCR8-201ENST00000406438 C4orf22Q6V702 233 aa12.57□□□□□ -0.4
SMCR8-201ENST00000406438 LDHDQ86WU2 507 aa12.57□□□□□ -0.4
SMCR8-201ENST00000406438 PPP1R14AQ96A00 147 aa12.57□□□□□ -0.4
SMCR8-201ENST00000406438 THTPAQ9BU02 230 aa12.57□□□□□ -0.4
SMCR8-201ENST00000406438 POLD4Q9HCU8 107 aa12.57□□□□□ -0.4
SMCR8-201ENST00000406438 RASSF9O75901 435 aa12.57□□□□□ -0.4
SMCR8-201ENST00000406438 PDGFRAP16234 1089 aa12.57□□□□□ -0.4
SMCR8-201ENST00000406438 MGAT5BQ3V5L5 792 aa12.57□□□□□ -0.4
SMCR8-201ENST00000406438 NOTUMQ6P988 496 aa12.57□□□□□ -0.4
SMCR8-201ENST00000406438 CYFIP2Q96F07 1278 aa12.57□□□□□ -0.4
SMCR8-201ENST00000406438 LRRIQ1Q96JM4 1722 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms