RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 PARP2Q9UGN5 583 aa16.98■□□□□ 0.31
CHRFAM7A-203ENST00000401522 PCYOX1Q9UHG3 505 aa16.98■□□□□ 0.31
CHRFAM7A-203ENST00000401522 KCNG1Q9UIX4 513 aa16.98■□□□□ 0.31
CHRFAM7A-203ENST00000401522 NOCTQ9UK39 431 aaKnown RBP16.98■□□□□ 0.31
CHRFAM7A-203ENST00000401522 NOVA2Q9UNW9 492 aaKnown RBP16.98■□□□□ 0.31
CHRFAM7A-203ENST00000401522 EXOC7Q9UPT5 735 aa16.98■□□□□ 0.31
CHRFAM7A-203ENST00000401522 DNAH12Q6ZR08 3092 aa16.98■□□□□ 0.31
CHRFAM7A-203ENST00000401522 GMNCA6NCL1 334 aa16.98■□□□□ 0.31
CHRFAM7A-203ENST00000401522 PODXLO00592 558 aa16.98■□□□□ 0.31
CHRFAM7A-203ENST00000401522 KIAA0391O15091 583 aaKnown RBP16.98■□□□□ 0.31
CHRFAM7A-203ENST00000401522 CYP2C9P11712 490 aa16.98■□□□□ 0.31
CHRFAM7A-203ENST00000401522 PTGIRP43119 386 aa16.98■□□□□ 0.31
CHRFAM7A-203ENST00000401522 MXD4Q14582 209 aaPredicted RBP16.98■□□□□ 0.31
CHRFAM7A-203ENST00000401522 SEL1L2Q5TEA6 688 aa16.98■□□□□ 0.31
CHRFAM7A-203ENST00000401522 TAF2Q6P1X5 1199 aa16.98■□□□□ 0.31
CHRFAM7A-203ENST00000401522 SERINC5Q86VE9 423 aa16.98■□□□□ 0.31
CHRFAM7A-203ENST00000401522 EPS8L1Q8TE68 723 aa16.98■□□□□ 0.31
CHRFAM7A-203ENST00000401522 PSPC1Q8WXF1 523 aaKnown RBP16.98■□□□□ 0.31
CHRFAM7A-203ENST00000401522 HVCN1Q96D96 273 aa16.98■□□□□ 0.31
CHRFAM7A-203ENST00000401522 TMEM117Q9H0C3 514 aa16.98■□□□□ 0.31
CHRFAM7A-203ENST00000401522 ATP8A1Q9Y2Q0 1164 aa16.98■□□□□ 0.31
CHRFAM7A-203ENST00000401522 KIAA0100Q14667 2235 aaKnown RBP16.97■□□□□ 0.31
CHRFAM7A-203ENST00000401522 ASAP2O43150 1006 aa16.97■□□□□ 0.31
CHRFAM7A-203ENST00000401522 TRAPPC3O43617 180 aa16.97■□□□□ 0.31
CHRFAM7A-203ENST00000401522 CHRNB2P17787 502 aa16.97■□□□□ 0.31
CHRFAM7A-203ENST00000401522 GLRA2P23416 452 aa16.97■□□□□ 0.31
CHRFAM7A-203ENST00000401522 USP8P40818 1118 aa16.97■□□□□ 0.31
CHRFAM7A-203ENST00000401522 CLCN3P51790 818 aa16.97■□□□□ 0.31
CHRFAM7A-203ENST00000401522 MFAP3P55082 362 aa16.97■□□□□ 0.31
CHRFAM7A-203ENST00000401522 COL13A1Q5TAT6 717 aaPredicted RBP16.97■□□□□ 0.31
CHRFAM7A-203ENST00000401522 C1orf53Q5VUE5 145 aa16.97■□□□□ 0.31
CHRFAM7A-203ENST00000401522 ADAT2Q7Z6V5 191 aaKnown RBP16.97■□□□□ 0.31
CHRFAM7A-203ENST00000401522 NOP9Q86U38 636 aaKnown RBP16.97■□□□□ 0.31
CHRFAM7A-203ENST00000401522 PRELID2Q8N945 189 aa16.97■□□□□ 0.31
CHRFAM7A-203ENST00000401522 PLEKHO2Q8TD55 490 aa16.97■□□□□ 0.31
CHRFAM7A-203ENST00000401522 DIS3LQ8TF46 1054 aaKnown RBP16.97■□□□□ 0.31
CHRFAM7A-203ENST00000401522 TLCD1Q96CP7 247 aa16.97■□□□□ 0.31
CHRFAM7A-203ENST00000401522 PCDHB18PQ96TA0 734 aa16.97■□□□□ 0.31
CHRFAM7A-203ENST00000401522 PABPC3Q9H361 631 aaKnown RBP16.97■□□□□ 0.31
CHRFAM7A-203ENST00000401522 EVPLQ92817 2033 aa16.96■□□□□ 0.31
CHRFAM7A-203ENST00000401522 CYP1A2P05177 515 aa16.96■□□□□ 0.31
CHRFAM7A-203ENST00000401522 COMTP21964 271 aa16.96■□□□□ 0.31
CHRFAM7A-203ENST00000401522 PEX5P50542 639 aa16.96■□□□□ 0.31
CHRFAM7A-203ENST00000401522 PMS2P54278 862 aa16.96■□□□□ 0.31
CHRFAM7A-203ENST00000401522 MAGOHP61326 146 aaKnown RBP16.96■□□□□ 0.31
CHRFAM7A-203ENST00000401522 SLC39A5Q6ZMH5 540 aa16.96■□□□□ 0.31
CHRFAM7A-203ENST00000401522 CROCCP2Q86T23 111 aa16.96■□□□□ 0.31
CHRFAM7A-203ENST00000401522 NME8Q8N427 588 aa16.96■□□□□ 0.31
CHRFAM7A-203ENST00000401522 ASAP3Q8TDY4 903 aa16.96■□□□□ 0.31
CHRFAM7A-203ENST00000401522 SPIRE2Q8WWL2 714 aa16.96■□□□□ 0.31
CHRFAM7A-203ENST00000401522 BSNDQ8WZ55 320 aa16.96■□□□□ 0.31
CHRFAM7A-203ENST00000401522 SHC3Q92529 594 aa16.96■□□□□ 0.31
CHRFAM7A-203ENST00000401522 KRT35Q92764 455 aa16.96■□□□□ 0.31
CHRFAM7A-203ENST00000401522 MAGOHBQ96A72 148 aaKnown RBP16.96■□□□□ 0.31
CHRFAM7A-203ENST00000401522 CYFIP2Q96F07 1278 aa16.96■□□□□ 0.31
CHRFAM7A-203ENST00000401522 IFT74Q96LB3 600 aa16.96■□□□□ 0.31
CHRFAM7A-203ENST00000401522 PPANQ9NQ55 473 aaKnown RBP16.96■□□□□ 0.31
CHRFAM7A-203ENST00000401522 TRIP12Q14669 1992 aaPredicted RBP16.96■□□□□ 0.31
CHRFAM7A-203ENST00000401522 TMEM110-MUSTN1A8MSY1 372 aa16.96■□□□□ 0.3
CHRFAM7A-203ENST00000401522 SLC16A4O15374 487 aa16.96■□□□□ 0.3
CHRFAM7A-203ENST00000401522 FSBPO95073 299 aa16.96■□□□□ 0.3
CHRFAM7A-203ENST00000401522 RPLP2P05387 115 aaKnown RBP16.96■□□□□ 0.3
CHRFAM7A-203ENST00000401522 ADRB2P07550 413 aa16.96■□□□□ 0.3
CHRFAM7A-203ENST00000401522 NPTX2P47972 431 aa16.96■□□□□ 0.3
CHRFAM7A-203ENST00000401522 PEX3P56589 373 aa16.96■□□□□ 0.3
CHRFAM7A-203ENST00000401522 CDC42EP1Q00587 391 aa16.96■□□□□ 0.3
CHRFAM7A-203ENST00000401522 LAMTOR4Q0VGL1 99 aa16.96■□□□□ 0.3
CHRFAM7A-203ENST00000401522 DMP1Q13316 513 aaPredicted RBP16.96■□□□□ 0.3
CHRFAM7A-203ENST00000401522 MESDQ14696 234 aa16.96■□□□□ 0.3
CHRFAM7A-203ENST00000401522 SNX17Q15036 470 aa16.96■□□□□ 0.3
CHRFAM7A-203ENST00000401522 CYP1B1Q16678 543 aa16.96■□□□□ 0.3
CHRFAM7A-203ENST00000401522 DENND2CQ68D51 928 aa16.96■□□□□ 0.3
CHRFAM7A-203ENST00000401522 ZDHHC24Q6UX98 284 aa16.96■□□□□ 0.3
CHRFAM7A-203ENST00000401522 RPAINQ86UA6 219 aa16.96■□□□□ 0.3
CHRFAM7A-203ENST00000401522 CD101Q93033 1021 aa16.96■□□□□ 0.3
CHRFAM7A-203ENST00000401522 PAWRQ96IZ0 340 aaKnown RBP16.96■□□□□ 0.3
CHRFAM7A-203ENST00000401522 KREMEN1Q96MU8 473 aa16.96■□□□□ 0.3
CHRFAM7A-203ENST00000401522 FAM129AQ9BZQ8 928 aa16.96■□□□□ 0.3
CHRFAM7A-203ENST00000401522 C11orf49Q9H6J7 331 aa16.96■□□□□ 0.3
CHRFAM7A-203ENST00000401522 TRMT13Q9NUP7 481 aaKnown RBP16.96■□□□□ 0.3
CHRFAM7A-203ENST00000401522 MTUS1Q9ULD2 1270 aa16.96■□□□□ 0.3
CHRFAM7A-203ENST00000401522 TULP1O00294 542 aaPredicted RBP16.95■□□□□ 0.3
CHRFAM7A-203ENST00000401522 NAMPTP43490 491 aa16.95■□□□□ 0.3
CHRFAM7A-203ENST00000401522 SMTNP53814 917 aa16.95■□□□□ 0.3
CHRFAM7A-203ENST00000401522 POU5F1BQ06416 359 aa16.95■□□□□ 0.3
CHRFAM7A-203ENST00000401522 PTK7Q13308 1070 aa16.95■□□□□ 0.3
CHRFAM7A-203ENST00000401522 BYSLQ13895 437 aaKnown RBP16.95■□□□□ 0.3
CHRFAM7A-203ENST00000401522 KRT39Q6A163 491 aa16.95■□□□□ 0.3
CHRFAM7A-203ENST00000401522 RHPN2Q8IUC4 686 aa16.95■□□□□ 0.3
CHRFAM7A-203ENST00000401522 KAT5Q92993 513 aa16.95■□□□□ 0.3
CHRFAM7A-203ENST00000401522 C18orf8Q96DM3 657 aa16.95■□□□□ 0.3
CHRFAM7A-203ENST00000401522 GRHL1Q9NZI5 618 aa16.95■□□□□ 0.3
CHRFAM7A-203ENST00000401522 UVRAGQ9P2Y5 699 aa16.95■□□□□ 0.3
CHRFAM7A-203ENST00000401522 CNOT8Q9UFF9 292 aaKnown RBP16.95■□□□□ 0.3
CHRFAM7A-203ENST00000401522 MTRF1LQ9UGC7 380 aaKnown RBP16.95■□□□□ 0.3
CHRFAM7A-203ENST00000401522 GTF3C4Q9UKN8 822 aa16.95■□□□□ 0.3
CHRFAM7A-203ENST00000401522 AKT3Q9Y243 479 aa16.95■□□□□ 0.3
CHRFAM7A-203ENST00000401522 SNX24Q9Y343 169 aa16.95■□□□□ 0.3
CHRFAM7A-203ENST00000401522 COQ4Q9Y3A0 265 aa16.95■□□□□ 0.3
CHRFAM7A-203ENST00000401522 MROH7Q68CQ1 1323 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 124.7 ms