RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 FAM71DQ8N9W8 422 aa14.4□□□□□ -0.1
VAPA-202ENST00000400000 SENP7Q9BQF6 1050 aa14.4□□□□□ -0.1
VAPA-202ENST00000400000 KATNAL1Q9BW62 490 aa14.4□□□□□ -0.1
VAPA-202ENST00000400000 CCDC151A5D8V7 595 aa14.4□□□□□ -0.1
VAPA-202ENST00000400000 GPAT2Q6NUI2 795 aa14.4□□□□□ -0.1
VAPA-202ENST00000400000 CERKQ8TCT0 537 aa14.4□□□□□ -0.1
VAPA-202ENST00000400000 TAAR1Q96RJ0 339 aa14.4□□□□□ -0.1
VAPA-202ENST00000400000 TSSK1BQ9BXA7 367 aa14.4□□□□□ -0.1
VAPA-202ENST00000400000 NOP53Q9NZM5 478 aaKnown RBP14.4□□□□□ -0.1
VAPA-202ENST00000400000 ZC3H7BQ9UGR2 993 aaKnown RBP14.4□□□□□ -0.1
VAPA-202ENST00000400000 PQBP1O60828 265 aaKnown RBP14.4□□□□□ -0.1
VAPA-202ENST00000400000 ITGB6P18564 788 aa14.4□□□□□ -0.1
VAPA-202ENST00000400000 IL10P22301 178 aa14.4□□□□□ -0.1
VAPA-202ENST00000400000 PGM1P36871 562 aa14.4□□□□□ -0.1
VAPA-202ENST00000400000 GALNTL6Q49A17 601 aa14.4□□□□□ -0.1
VAPA-202ENST00000400000 ATG4CQ96DT6 458 aa14.4□□□□□ -0.1
VAPA-202ENST00000400000 RHOBTB1O94844 696 aa14.39□□□□□ -0.11
VAPA-202ENST00000400000 PDXDC1Q6P996 788 aa14.39□□□□□ -0.11
VAPA-202ENST00000400000 EYA4O95677 639 aa14.39□□□□□ -0.11
VAPA-202ENST00000400000 KRT4P19013 534 aa14.39□□□□□ -0.11
VAPA-202ENST00000400000 DGKDQ16760 1214 aa14.39□□□□□ -0.11
VAPA-202ENST00000400000 IYDQ6PHW0 289 aa14.39□□□□□ -0.11
VAPA-202ENST00000400000 VPS50Q96JG6 964 aa14.39□□□□□ -0.11
VAPA-202ENST00000400000 NDE1Q9NXR1 346 aa14.39□□□□□ -0.11
VAPA-202ENST00000400000 H2AFY2Q9P0M6 372 aaPredicted RBP14.39□□□□□ -0.11
VAPA-202ENST00000400000 PRR12Q9ULL5 1215 aa14.39□□□□□ -0.11
VAPA-202ENST00000400000 MYBL1P10243 752 aa14.39□□□□□ -0.11
VAPA-202ENST00000400000 TCF7P36402 384 aaPredicted RBP14.39□□□□□ -0.11
VAPA-202ENST00000400000 OSGEPL1Q9H4B0 414 aa14.39□□□□□ -0.11
VAPA-202ENST00000400000 EXOSC4Q9NPD3 245 aaKnown RBP14.39□□□□□ -0.11
VAPA-202ENST00000400000 NPC1L1Q9UHC9 1359 aa14.39□□□□□ -0.11
VAPA-202ENST00000400000 ZNF286BP0CG31 522 aa14.39□□□□□ -0.11
VAPA-202ENST00000400000 ZFXP17010 805 aaPredicted RBP14.39□□□□□ -0.11
VAPA-202ENST00000400000 FCGRTP55899 365 aa14.39□□□□□ -0.11
VAPA-202ENST00000400000 EPHA7Q15375 998 aa14.39□□□□□ -0.11
VAPA-202ENST00000400000 FBXO16Q8IX29 292 aaPredicted RBP14.39□□□□□ -0.11
VAPA-202ENST00000400000 TEX13BQ9BXU2 312 aa14.39□□□□□ -0.11
VAPA-202ENST00000400000 GRIN3BO60391 1043 aa14.39□□□□□ -0.11
VAPA-202ENST00000400000 KLRK1P26718 216 aa14.39□□□□□ -0.11
VAPA-202ENST00000400000 DENND5BQ6ZUT9 1274 aa14.39□□□□□ -0.11
VAPA-202ENST00000400000 HORMAD1Q86X24 394 aa14.39□□□□□ -0.11
VAPA-202ENST00000400000 MAN1C1Q9NR34 630 aa14.39□□□□□ -0.11
VAPA-202ENST00000400000 FBXO28Q9NVF7 368 aa14.39□□□□□ -0.11
VAPA-202ENST00000400000 N6AMT1Q9Y5N5 214 aa14.39□□□□□ -0.11
VAPA-202ENST00000400000 FHOD1Q9Y613 1164 aa14.39□□□□□ -0.11
VAPA-202ENST00000400000 UBXN8O00124 270 aa14.38□□□□□ -0.11
VAPA-202ENST00000400000 P4HA2O15460 535 aa14.38□□□□□ -0.11
VAPA-202ENST00000400000 WDR47O94967 919 aa14.38□□□□□ -0.11
VAPA-202ENST00000400000 APOA4P06727 396 aa14.38□□□□□ -0.11
VAPA-202ENST00000400000 LONP2Q86WA8 852 aa14.38□□□□□ -0.11
VAPA-202ENST00000400000 TBC1D19Q8N5T2 526 aa14.38□□□□□ -0.11
VAPA-202ENST00000400000 NSUN4Q96CB9 384 aaKnown RBP14.38□□□□□ -0.11
VAPA-202ENST00000400000 ASCC2Q9H1I8 757 aaPredicted RBP14.38□□□□□ -0.11
VAPA-202ENST00000400000 KCTD10Q9H3F6 313 aa14.38□□□□□ -0.11
VAPA-202ENST00000400000 GPRC5CQ9NQ84 441 aa14.38□□□□□ -0.11
VAPA-202ENST00000400000 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.38□□□□□ -0.11
VAPA-202ENST00000400000 CINPQ9BW66 212 aaPredicted RBP14.38□□□□□ -0.11
VAPA-202ENST00000400000 SLC39A10Q9ULF5 831 aa14.38□□□□□ -0.11
VAPA-202ENST00000400000 MAP3K4Q9Y6R4 1608 aa14.38□□□□□ -0.11
VAPA-202ENST00000400000 EFCAB14O75071 495 aa14.38□□□□□ -0.11
VAPA-202ENST00000400000 MYL2P10916 166 aa14.38□□□□□ -0.11
VAPA-202ENST00000400000 CASP4P49662 377 aa14.38□□□□□ -0.11
VAPA-202ENST00000400000 PLOD1Q02809 727 aaPredicted RBP14.38□□□□□ -0.11
VAPA-202ENST00000400000 FMR1Q06787 632 aaKnown RBP eCLIP14.38□□□□□ -0.119e-12■■■□□ 14.6
VAPA-202ENST00000400000 EMBQ6PCB8 327 aa14.38□□□□□ -0.11
VAPA-202ENST00000400000 RNF180Q86T96 592 aa14.38□□□□□ -0.11
VAPA-202ENST00000400000 WNK4Q96J92 1243 aa14.38□□□□□ -0.11
VAPA-202ENST00000400000 CAND2O75155 1236 aa14.38□□□□□ -0.11
VAPA-202ENST00000400000 SLC9A1P19634 815 aa14.38□□□□□ -0.11
VAPA-202ENST00000400000 MLH1P40692 756 aa14.38□□□□□ -0.11
VAPA-202ENST00000400000 PRKCQQ04759 706 aa14.38□□□□□ -0.11
VAPA-202ENST00000400000 EML3Q32P44 896 aa14.38□□□□□ -0.11
VAPA-202ENST00000400000 ADCK1Q86TW2 530 aa14.38□□□□□ -0.11
VAPA-202ENST00000400000 SPATA18Q8TC71 538 aa14.38□□□□□ -0.11
VAPA-202ENST00000400000 ANKRD49Q8WVL7 239 aa14.38□□□□□ -0.11
VAPA-202ENST00000400000 ERVK-7P63135 1459 aa14.38□□□□□ -0.11
VAPA-202ENST00000400000 LOC100653049A0A140TA62 436 aa14.38□□□□□ -0.11
VAPA-202ENST00000400000 RGL2O15211 777 aa14.38□□□□□ -0.11
VAPA-202ENST00000400000 KRT34O76011 436 aa14.38□□□□□ -0.11
VAPA-202ENST00000400000 PGS1Q32NB8 556 aa14.38□□□□□ -0.11
VAPA-202ENST00000400000 STOX1Q6ZVD7 989 aa14.38□□□□□ -0.11
VAPA-202ENST00000400000 MTMR4Q9NYA4 1195 aa14.38□□□□□ -0.11
VAPA-202ENST00000400000 HERC5Q9UII4 1024 aaKnown RBP14.38□□□□□ -0.11
VAPA-202ENST00000400000 PCDHB8Q9UN66 801 aa14.38□□□□□ -0.11
VAPA-202ENST00000400000 CASTOR2A6NHX0 329 aa14.38□□□□□ -0.11
VAPA-202ENST00000400000 MBL2P11226 248 aaPredicted RBP14.38□□□□□ -0.11
VAPA-202ENST00000400000 PCNAP12004 261 aa14.38□□□□□ -0.11
VAPA-202ENST00000400000 DARSP14868 501 aaKnown RBP14.38□□□□□ -0.11
VAPA-202ENST00000400000 KCNB1Q14721 858 aa14.38□□□□□ -0.11
VAPA-202ENST00000400000 ZNF555Q8NEP9 628 aa14.38□□□□□ -0.11
VAPA-202ENST00000400000 CYFIP2Q96F07 1278 aa14.38□□□□□ -0.11
VAPA-202ENST00000400000 PLEKHA8Q96JA3 519 aa14.38□□□□□ -0.11
VAPA-202ENST00000400000 APEX2Q9UBZ4 518 aa14.38□□□□□ -0.11
VAPA-202ENST00000400000 CRLS1Q9UJA2 301 aa14.38□□□□□ -0.11
VAPA-202ENST00000400000 C17orf102A2RUQ5 167 aa14.37□□□□□ -0.11
VAPA-202ENST00000400000 CYP7B1O75881 506 aa14.37□□□□□ -0.11
VAPA-202ENST00000400000 HLA-DRAP01903 254 aa14.37□□□□□ -0.11
VAPA-202ENST00000400000 C12orf60Q5U649 245 aa14.37□□□□□ -0.11
VAPA-202ENST00000400000 DNAAF5Q86Y56 855 aa14.37□□□□□ -0.11
VAPA-202ENST00000400000 THTPAQ9BU02 230 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms