RNA–Protein interactions for RNA: ENST00000399516.7

LAMA3-203, Transcript of laminin subunit alpha 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA3, Length 9,834 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-203ENST00000399516 DDX5P17844 614 aaKnown RBP11.78□□□□□ -0.52
LAMA3-203ENST00000399516 TRIM16LQ309B1 348 aa11.78□□□□□ -0.52
LAMA3-203ENST00000399516 SPATA18Q8TC71 538 aa11.78□□□□□ -0.52
LAMA3-203ENST00000399516 SH3KBP1Q96B97 665 aa11.78□□□□□ -0.52
LAMA3-203ENST00000399516 PSTPIP1O43586 416 aa11.77□□□□□ -0.52
LAMA3-203ENST00000399516 LRRC34Q8IZ02 419 aa11.77□□□□□ -0.52
LAMA3-203ENST00000399516 KIF12Q96FN5 646 aa11.77□□□□□ -0.52
LAMA3-203ENST00000399516 KLF6Q99612 283 aaPredicted RBP11.77□□□□□ -0.52
LAMA3-203ENST00000399516 SH3GL2Q99962 352 aa11.77□□□□□ -0.52
LAMA3-203ENST00000399516 WDR35Q9P2L0 1181 aa11.77□□□□□ -0.52
LAMA3-203ENST00000399516 ARIH2O95376 493 aa11.77□□□□□ -0.52
LAMA3-203ENST00000399516 BAG6P46379 1132 aa11.77□□□□□ -0.52
LAMA3-203ENST00000399516 WDR72Q3MJ13 1102 aa11.77□□□□□ -0.52
LAMA3-203ENST00000399516 ATG9AQ7Z3C6 839 aa11.77□□□□□ -0.52
LAMA3-203ENST00000399516 E2F7Q96AV8 911 aa11.77□□□□□ -0.52
LAMA3-203ENST00000399516 WNK4Q96J92 1243 aa11.77□□□□□ -0.52
LAMA3-203ENST00000399516 AP4S1Q9Y587 144 aa11.77□□□□□ -0.52
LAMA3-203ENST00000399516 CCDC15Q0P6D6 951 aa11.77□□□□□ -0.53
LAMA3-203ENST00000399516 SLC29A2Q14542 456 aa11.77□□□□□ -0.53
LAMA3-203ENST00000399516 TTLL4Q14679 1199 aa11.77□□□□□ -0.53
LAMA3-203ENST00000399516 GPR141Q7Z602 305 aa11.77□□□□□ -0.53
LAMA3-203ENST00000399516 EIF3DO15371 548 aaKnown RBP eCLIP11.77□□□□□ -0.53
LAMA3-203ENST00000399516 DLGAP3O95886 979 aa11.77□□□□□ -0.53
LAMA3-203ENST00000399516 GNAT1P11488 350 aa11.77□□□□□ -0.53
LAMA3-203ENST00000399516 USP10Q14694 798 aaKnown RBP11.77□□□□□ -0.53
LAMA3-203ENST00000399516 KIZQ2M2Z5 673 aa11.77□□□□□ -0.53
LAMA3-203ENST00000399516 COBLL1Q53SF7 1204 aa11.77□□□□□ -0.53
LAMA3-203ENST00000399516 WDR93Q6P2C0 686 aa11.77□□□□□ -0.53
LAMA3-203ENST00000399516 RBBP8NLQ8NC74 664 aaPredicted RBP11.77□□□□□ -0.53
LAMA3-203ENST00000399516 SFMBT1Q9UHJ3 866 aa11.77□□□□□ -0.53
LAMA3-203ENST00000399516 COILP38432 576 aaPredicted RBP11.77□□□□□ -0.53
LAMA3-203ENST00000399516 C3orf62Q6ZUJ4 267 aa11.77□□□□□ -0.53
LAMA3-203ENST00000399516 ANKS1AQ92625 1134 aa11.77□□□□□ -0.53
LAMA3-203ENST00000399516 IL1RL2Q9HB29 575 aa11.77□□□□□ -0.53
LAMA3-203ENST00000399516 TRPC5OSA6NMA1 111 aa11.77□□□□□ -0.53
LAMA3-203ENST00000399516 BTBD8Q5XKL5 378 aa11.77□□□□□ -0.53
LAMA3-203ENST00000399516 KCNB2Q92953 911 aa11.77□□□□□ -0.53
LAMA3-203ENST00000399516 ZSWIM1Q9BR11 485 aa11.77□□□□□ -0.53
LAMA3-203ENST00000399516 MPP6Q9NZW5 540 aa11.77□□□□□ -0.53
LAMA3-203ENST00000399516 PAK5Q9P286 719 aa11.77□□□□□ -0.53
LAMA3-203ENST00000399516 POLBP06746 335 aa11.77□□□□□ -0.53
LAMA3-203ENST00000399516 MYBP10242 640 aa11.77□□□□□ -0.53
LAMA3-203ENST00000399516 CCDC142Q17RM4 750 aa11.77□□□□□ -0.53
LAMA3-203ENST00000399516 URGCPQ8TCY9 931 aa11.77□□□□□ -0.53
LAMA3-203ENST00000399516 PPP1R3GB7ZBB8 358 aa11.77□□□□□ -0.53
LAMA3-203ENST00000399516 SPRP35270 261 aaPredicted RBP11.77□□□□□ -0.53
LAMA3-203ENST00000399516 DCAF4L1Q3SXM0 396 aa11.77□□□□□ -0.53
LAMA3-203ENST00000399516 MYMKA6NI61 221 aa11.76□□□□□ -0.53
LAMA3-203ENST00000399516 EEF2KO00418 725 aaKnown RBP11.76□□□□□ -0.53
LAMA3-203ENST00000399516 H2AFYO75367 372 aaKnown RBP11.76□□□□□ -0.53
LAMA3-203ENST00000399516 H2AFXP16104 143 aaPredicted RBP11.76□□□□□ -0.53
LAMA3-203ENST00000399516 FAM71DQ8N9W8 422 aa11.76□□□□□ -0.53
LAMA3-203ENST00000399516 TERB1Q8NA31 727 aa11.76□□□□□ -0.53
LAMA3-203ENST00000399516 RSAD1Q9HA92 442 aa11.76□□□□□ -0.53
LAMA3-203ENST00000399516 FAM32AQ9Y421 112 aaKnown RBP11.76□□□□□ -0.53
LAMA3-203ENST00000399516 NUDT2P50583 147 aa11.76□□□□□ -0.53
LAMA3-203ENST00000399516 FOXO4P98177 505 aa11.76□□□□□ -0.53
LAMA3-203ENST00000399516 GOLPH3Q9H4A6 298 aa11.76□□□□□ -0.53
LAMA3-203ENST00000399516 DTNAQ9Y4J8 743 aa11.76□□□□□ -0.53
LAMA3-203ENST00000399516 PCDHA10Q9Y5I2 948 aa11.76□□□□□ -0.53
LAMA3-203ENST00000399516 KCNK10P57789 538 aa11.76□□□□□ -0.53
LAMA3-203ENST00000399516 NCOA4Q13772 614 aa11.76□□□□□ -0.53
LAMA3-203ENST00000399516 SPDYAQ5MJ70 313 aa11.76□□□□□ -0.53
LAMA3-203ENST00000399516 PPP4R4Q6NUP7 873 aa11.76□□□□□ -0.53
LAMA3-203ENST00000399516 INPP5DQ92835 1189 aa11.76□□□□□ -0.53
LAMA3-203ENST00000399516 TPCN2Q8NHX9 752 aa11.76□□□□□ -0.53
LAMA3-203ENST00000399516 ABHD8Q96I13 439 aa11.76□□□□□ -0.53
LAMA3-203ENST00000399516 RGL1Q9NZL6 768 aa11.76□□□□□ -0.53
LAMA3-203ENST00000399516 KIF20BQ96Q89 1820 aa11.76□□□□□ -0.53
LAMA3-203ENST00000399516 PLEKP08567 350 aaPredicted RBP11.76□□□□□ -0.53
LAMA3-203ENST00000399516 OCM2P0CE71 109 aa11.76□□□□□ -0.53
LAMA3-203ENST00000399516 OCMP0CE72 109 aaPredicted RBP11.76□□□□□ -0.53
LAMA3-203ENST00000399516 KLHDC7AQ5VTJ3 777 aa11.76□□□□□ -0.53
LAMA3-203ENST00000399516 SNRNP27Q8WVK2 155 aaKnown RBP11.76□□□□□ -0.53
LAMA3-203ENST00000399516 ZBTB10Q96DT7 871 aa11.76□□□□□ -0.53
LAMA3-203ENST00000399516 GEMIN8Q9NWZ8 242 aaKnown RBP11.76□□□□□ -0.53
LAMA3-203ENST00000399516 HOXC10Q9NYD6 342 aa11.76□□□□□ -0.53
LAMA3-203ENST00000399516 WBP4O75554 376 aaKnown RBP11.76□□□□□ -0.53
LAMA3-203ENST00000399516 PRKCBP05771 671 aa11.76□□□□□ -0.53
LAMA3-203ENST00000399516 SMTNL2Q2TAL5 461 aa11.76□□□□□ -0.53
LAMA3-203ENST00000399516 RTKN2Q8IZC4 609 aa11.76□□□□□ -0.53
LAMA3-203ENST00000399516 PHTF1Q9UMS5 762 aa11.76□□□□□ -0.53
LAMA3-203ENST00000399516 DLC1Q96QB1 1528 aa11.76□□□□□ -0.53
LAMA3-203ENST00000399516 AKR1B1P15121 316 aa11.76□□□□□ -0.53
LAMA3-203ENST00000399516 GRIN1Q05586 938 aa11.76□□□□□ -0.53
LAMA3-203ENST00000399516 NKX1-1Q15270 411 aaPredicted RBP11.76□□□□□ -0.53
LAMA3-203ENST00000399516 THEMIS2Q5TEJ8 643 aa11.76□□□□□ -0.53
LAMA3-203ENST00000399516 RRM2BQ7LG56 351 aa11.76□□□□□ -0.53
LAMA3-203ENST00000399516 IGDCC4Q8TDY8 1250 aa11.76□□□□□ -0.53
LAMA3-203ENST00000399516 AGBL1Q96MI9 1066 aa11.76□□□□□ -0.53
LAMA3-203ENST00000399516 PPP1R2P1Q96PQ5 205 aa11.76□□□□□ -0.53
LAMA3-203ENST00000399516 CARD9Q9H257 536 aa11.76□□□□□ -0.53
LAMA3-203ENST00000399516 ACAD9Q9H845 621 aa11.76□□□□□ -0.53
LAMA3-203ENST00000399516 V9GYQ6 96 aa11.76□□□□□ -0.53
LAMA3-203ENST00000399516 SYNDIG1LA6NDD5 238 aa11.75□□□□□ -0.53
LAMA3-203ENST00000399516 CYP27B1O15528 508 aa11.75□□□□□ -0.53
LAMA3-203ENST00000399516 CLK1P49759 484 aaKnown RBP11.75□□□□□ -0.53
LAMA3-203ENST00000399516 TMEM132DQ14C87 1099 aa11.75□□□□□ -0.53
LAMA3-203ENST00000399516 IFNEQ86WN2 208 aa11.75□□□□□ -0.53
LAMA3-203ENST00000399516 CCDC103Q8IW40 242 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms