RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 DCTN3O75935 186 aa10.46□□□□□ -0.74
PTCHD4-202ENST00000398738 S1PR4O95977 384 aa10.46□□□□□ -0.74
PTCHD4-202ENST00000398738 FGFR1P11362 822 aa10.46□□□□□ -0.74
PTCHD4-202ENST00000398738 KRT4P19013 534 aa10.46□□□□□ -0.74
PTCHD4-202ENST00000398738 CETN2P41208 172 aa10.46□□□□□ -0.74
PTCHD4-202ENST00000398738 VAMP7P51809 220 aa10.46□□□□□ -0.74
PTCHD4-202ENST00000398738 CACNA2D1P54289 1103 aa10.46□□□□□ -0.74
PTCHD4-202ENST00000398738 GPSM2P81274 684 aa10.46□□□□□ -0.74
PTCHD4-202ENST00000398738 LAMB3Q13751 1172 aa10.46□□□□□ -0.74
PTCHD4-202ENST00000398738 KIF22Q14807 665 aa10.46□□□□□ -0.74
PTCHD4-202ENST00000398738 ATP13A4Q4VNC1 1196 aa10.46□□□□□ -0.74
PTCHD4-202ENST00000398738 PCNX4Q63HM2 1172 aa10.46□□□□□ -0.74
PTCHD4-202ENST00000398738 OTOAQ7RTW8 1153 aa10.46□□□□□ -0.74
PTCHD4-202ENST00000398738 LAPTM4BQ86VI4 370 aa10.46□□□□□ -0.74
PTCHD4-202ENST00000398738 ZBED8Q8IZ13 594 aa10.46□□□□□ -0.74
PTCHD4-202ENST00000398738 RBBP8NLQ8NC74 664 aaPredicted RBP10.46□□□□□ -0.74
PTCHD4-202ENST00000398738 GBP5Q96PP8 586 aa10.46□□□□□ -0.74
PTCHD4-202ENST00000398738 TTC1Q99614 292 aa10.46□□□□□ -0.74
PTCHD4-202ENST00000398738 MIPEPQ99797 713 aa10.46□□□□□ -0.74
PTCHD4-202ENST00000398738 PLVAPQ9BX97 442 aa10.46□□□□□ -0.74
PTCHD4-202ENST00000398738 KIAA1586Q9HCI6 787 aa10.46□□□□□ -0.74
PTCHD4-202ENST00000398738 TOPORSQ9NS56 1045 aaPredicted RBP10.46□□□□□ -0.74
PTCHD4-202ENST00000398738 WHRNQ9P202 907 aa10.46□□□□□ -0.74
PTCHD4-202ENST00000398738 STOML1Q9UBI4 398 aa10.46□□□□□ -0.74
PTCHD4-202ENST00000398738 HEY2Q9UBP5 337 aa10.46□□□□□ -0.74
PTCHD4-202ENST00000398738 WASF2Q9Y6W5 498 aa10.46□□□□□ -0.74
PTCHD4-202ENST00000398738 A0A1B0GUL6 1792 aa10.46□□□□□ -0.74
PTCHD4-202ENST00000398738 TMEM150BA6NC51 233 aa10.45□□□□□ -0.74
PTCHD4-202ENST00000398738 GDF11O95390 407 aa10.45□□□□□ -0.74
PTCHD4-202ENST00000398738 ADRA1DP25100 572 aa10.45□□□□□ -0.74
PTCHD4-202ENST00000398738 USP4Q13107 963 aa10.45□□□□□ -0.74
PTCHD4-202ENST00000398738 RASA3Q14644 834 aa10.45□□□□□ -0.74
PTCHD4-202ENST00000398738 CLUL1Q15846 466 aa10.45□□□□□ -0.74
PTCHD4-202ENST00000398738 PLEKHG4Q58EX7 1191 aa10.45□□□□□ -0.74
PTCHD4-202ENST00000398738 FHDC1Q9C0D6 1143 aaPredicted RBP10.45□□□□□ -0.74
PTCHD4-202ENST00000398738 ARL8BQ9NVJ2 186 aa10.45□□□□□ -0.74
PTCHD4-202ENST00000398738 EVA1BQ9NVM1 165 aa10.45□□□□□ -0.74
PTCHD4-202ENST00000398738 DAGLAQ9Y4D2 1042 aa10.45□□□□□ -0.74
PTCHD4-202ENST00000398738 ROBO3Q96MS0 1386 aa10.45□□□□□ -0.74
PTCHD4-202ENST00000398738 hCG_2014768A0A024R1R8 64 aa10.45□□□□□ -0.74
PTCHD4-202ENST00000398738 SLITRK3O94933 977 aa10.45□□□□□ -0.74
PTCHD4-202ENST00000398738 IVDP26440 423 aa10.45□□□□□ -0.74
PTCHD4-202ENST00000398738 MXI1P50539 228 aa10.45□□□□□ -0.74
PTCHD4-202ENST00000398738 ROR2Q01974 943 aaKnown RBP10.45□□□□□ -0.74
PTCHD4-202ENST00000398738 THOC5Q13769 683 aaKnown RBP10.45□□□□□ -0.74
PTCHD4-202ENST00000398738 PTPRNQ16849 979 aa10.45□□□□□ -0.74
PTCHD4-202ENST00000398738 ACSBG2Q5FVE4 666 aa10.45□□□□□ -0.74
PTCHD4-202ENST00000398738 GPATCH4Q5T3I0 446 aaKnown RBP10.45□□□□□ -0.74
PTCHD4-202ENST00000398738 LMBRD2Q68DH5 695 aaPredicted RBP10.45□□□□□ -0.74
PTCHD4-202ENST00000398738 CLEC4GQ6UXB4 293 aa10.45□□□□□ -0.74
PTCHD4-202ENST00000398738 ZFPM1Q8IX07 1006 aa10.45□□□□□ -0.74
PTCHD4-202ENST00000398738 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.45□□□□□ -0.74
PTCHD4-202ENST00000398738 SLC25A41Q8N5S1 370 aa10.45□□□□□ -0.74
PTCHD4-202ENST00000398738 WDR60Q8WVS4 1066 aa10.45□□□□□ -0.74
PTCHD4-202ENST00000398738 NRG4Q8WWG1 115 aa10.45□□□□□ -0.74
PTCHD4-202ENST00000398738 GRAMD1AQ96CP6 724 aa10.45□□□□□ -0.74
PTCHD4-202ENST00000398738 CADM1Q9BY67 442 aaKnown RBP10.45□□□□□ -0.74
PTCHD4-202ENST00000398738 LRRC19Q9H756 370 aa10.45□□□□□ -0.74
PTCHD4-202ENST00000398738 WRAP73Q9P2S5 460 aaPredicted RBP10.45□□□□□ -0.74
PTCHD4-202ENST00000398738 FCF1Q9Y324 198 aaKnown RBP10.45□□□□□ -0.74
PTCHD4-202ENST00000398738 LRP5O75197 1615 aa10.45□□□□□ -0.74
PTCHD4-202ENST00000398738 BRWD3Q6RI45 1802 aa10.45□□□□□ -0.74
PTCHD4-202ENST00000398738 ARHGEF35A5YM69 484 aa10.45□□□□□ -0.74
PTCHD4-202ENST00000398738 ASMTLO95671 621 aa10.45□□□□□ -0.74
PTCHD4-202ENST00000398738 NFIAQ12857 509 aa10.45□□□□□ -0.74
PTCHD4-202ENST00000398738 EFTUD2Q15029 972 aaKnown RBP eCLIP10.45□□□□□ -0.743e-7■□□□□ 10.1
PTCHD4-202ENST00000398738 AGERQ15109 404 aa10.45□□□□□ -0.74
PTCHD4-202ENST00000398738 FYB2Q5VWT5 728 aa10.45□□□□□ -0.74
PTCHD4-202ENST00000398738 TTC7BQ86TV6 843 aa10.45□□□□□ -0.74
PTCHD4-202ENST00000398738 LRRC6Q86X45 466 aa10.45□□□□□ -0.74
PTCHD4-202ENST00000398738 CEP120Q8N960 986 aa10.45□□□□□ -0.74
PTCHD4-202ENST00000398738 PPFIBP2Q8ND30 876 aa10.45□□□□□ -0.74
PTCHD4-202ENST00000398738 ATL2Q8NHH9 583 aa10.45□□□□□ -0.74
PTCHD4-202ENST00000398738 KREMEN1Q96MU8 473 aa10.45□□□□□ -0.74
PTCHD4-202ENST00000398738 DCLRE1BQ9H816 532 aa10.45□□□□□ -0.74
PTCHD4-202ENST00000398738 TSR3Q9UJK0 312 aaKnown RBP10.45□□□□□ -0.74
PTCHD4-202ENST00000398738 NEU2Q9Y3R4 380 aa10.45□□□□□ -0.74
PTCHD4-202ENST00000398738 LIN7AO14910 233 aaPredicted RBP10.44□□□□□ -0.74
PTCHD4-202ENST00000398738 GAS7O60861 476 aa10.44□□□□□ -0.74
PTCHD4-202ENST00000398738 TBX10O75333 385 aa10.44□□□□□ -0.74
PTCHD4-202ENST00000398738 GGPS1O95749 300 aa10.44□□□□□ -0.74
PTCHD4-202ENST00000398738 VHLP40337 213 aa10.44□□□□□ -0.74
PTCHD4-202ENST00000398738 NEK3P51956 506 aa10.44□□□□□ -0.74
PTCHD4-202ENST00000398738 RBM5P52756 815 aaKnown RBP eCLIP10.44□□□□□ -0.74
PTCHD4-202ENST00000398738 YARSP54577 528 aaKnown RBP10.44□□□□□ -0.74
PTCHD4-202ENST00000398738 FMO1Q01740 532 aa10.44□□□□□ -0.74
PTCHD4-202ENST00000398738 MAPK6Q16659 721 aa10.44□□□□□ -0.74
PTCHD4-202ENST00000398738 PARP6Q2NL67 630 aa10.44□□□□□ -0.74
PTCHD4-202ENST00000398738 PLA2G2CQ5R387 149 aa10.44□□□□□ -0.74
PTCHD4-202ENST00000398738 RHBDF2Q6PJF5 856 aa10.44□□□□□ -0.74
PTCHD4-202ENST00000398738 ZNF75CPQ92670 426 aaPredicted RBP10.44□□□□□ -0.74
PTCHD4-202ENST00000398738 LENG9Q96B70 501 aa10.44□□□□□ -0.74
PTCHD4-202ENST00000398738 FAM161BQ96MY7 647 aa10.44□□□□□ -0.74
PTCHD4-202ENST00000398738 DCLK3Q9C098 648 aa10.44□□□□□ -0.74
PTCHD4-202ENST00000398738 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.44□□□□□ -0.74
PTCHD4-202ENST00000398738 TOGARAM1Q9Y4F4 1720 aa10.44□□□□□ -0.74
PTCHD4-202ENST00000398738 EDF1O60869 148 aaKnown RBP10.44□□□□□ -0.74
PTCHD4-202ENST00000398738 ATP5HO75947 161 aa10.44□□□□□ -0.74
PTCHD4-202ENST00000398738 PTPN4P29074 926 aa10.44□□□□□ -0.74
PTCHD4-202ENST00000398738 SERPINB3P29508 390 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms