RNA–Protein interactions for RNA: ENST00000398559.6

TMF1-201, Transcript of TATA element modulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMF1, Length 6,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMF1-201ENST00000398559 SEPT3Q9UH03 358 aa12.34□□□□□ -0.43
TMF1-201ENST00000398559 COILP38432 576 aaPredicted RBP12.33□□□□□ -0.44
TMF1-201ENST00000398559 NRKQ7Z2Y5 1582 aa12.33□□□□□ -0.44
TMF1-201ENST00000398559 POLRMTO00411 1230 aaKnown RBP12.33□□□□□ -0.44
TMF1-201ENST00000398559 DPYSL4O14531 572 aa12.33□□□□□ -0.44
TMF1-201ENST00000398559 ZBTB39O15060 712 aa12.33□□□□□ -0.44
TMF1-201ENST00000398559 RPS6KA4O75676 772 aa12.33□□□□□ -0.44
TMF1-201ENST00000398559 DNAJC3Q13217 504 aa12.33□□□□□ -0.44
TMF1-201ENST00000398559 LRRC34Q8IZ02 419 aa12.33□□□□□ -0.44
TMF1-201ENST00000398559 CASKIN2Q8WXE0 1202 aa12.33□□□□□ -0.44
TMF1-201ENST00000398559 PHF21AQ96BD5 680 aa12.33□□□□□ -0.44
TMF1-201ENST00000398559 GRID1Q9ULK0 1009 aa12.33□□□□□ -0.44
TMF1-201ENST00000398559 SAMD9LQ8IVG5 1584 aa12.33□□□□□ -0.44
TMF1-201ENST00000398559 NDUFS3O75489 264 aa12.33□□□□□ -0.44
TMF1-201ENST00000398559 SERPIND1P05546 499 aa12.33□□□□□ -0.44
TMF1-201ENST00000398559 TMEM253P0C7T8 217 aa12.33□□□□□ -0.44
TMF1-201ENST00000398559 GEMIN4P57678 1058 aaKnown RBP12.33□□□□□ -0.44
TMF1-201ENST00000398559 CCDC15Q0P6D6 951 aa12.33□□□□□ -0.44
TMF1-201ENST00000398559 ZC2HC1CQ53FD0 456 aaPredicted RBP12.33□□□□□ -0.44
TMF1-201ENST00000398559 CYB5D1Q6P9G0 228 aa12.33□□□□□ -0.44
TMF1-201ENST00000398559 SHCBP1Q8NEM2 672 aa12.33□□□□□ -0.44
TMF1-201ENST00000398559 GID8Q9NWU2 228 aa12.33□□□□□ -0.44
TMF1-201ENST00000398559 SCN3BQ9NY72 215 aa12.33□□□□□ -0.44
TMF1-201ENST00000398559 CLK1P49759 484 aaKnown RBP12.33□□□□□ -0.44
TMF1-201ENST00000398559 FOXP3Q9BZS1 431 aa12.33□□□□□ -0.44
TMF1-201ENST00000398559 CAAP1Q9H8G2 361 aa12.33□□□□□ -0.44
TMF1-201ENST00000398559 KIAA0391O15091 583 aaKnown RBP12.33□□□□□ -0.44
TMF1-201ENST00000398559 HIST1H2AGP0C0S8 130 aaPredicted RBP12.33□□□□□ -0.44
TMF1-201ENST00000398559 HIST1H2ADP20671 130 aa12.33□□□□□ -0.44
TMF1-201ENST00000398559 DEFA1P59665 94 aa12.33□□□□□ -0.44
TMF1-201ENST00000398559 DEFA3P59666 94 aa12.33□□□□□ -0.44
TMF1-201ENST00000398559 CENPCQ03188 943 aa12.33□□□□□ -0.44
TMF1-201ENST00000398559 CCDC142Q17RM4 750 aa12.33□□□□□ -0.44
TMF1-201ENST00000398559 SYTL3Q4VX76 610 aa12.33□□□□□ -0.44
TMF1-201ENST00000398559 C12orf60Q5U649 245 aa12.33□□□□□ -0.44
TMF1-201ENST00000398559 SPATA2LQ8IUW3 424 aaPredicted RBP12.33□□□□□ -0.44
TMF1-201ENST00000398559 WNK4Q96J92 1243 aa12.33□□□□□ -0.44
TMF1-201ENST00000398559 HIST1H2AHQ96KK5 128 aa12.33□□□□□ -0.44
TMF1-201ENST00000398559 CNDP1Q96KN2 507 aa12.33□□□□□ -0.44
TMF1-201ENST00000398559 HIST1H2AJQ99878 128 aa12.33□□□□□ -0.44
TMF1-201ENST00000398559 H2AFJQ9BTM1 129 aa12.33□□□□□ -0.44
TMF1-201ENST00000398559 RPAP3Q9H6T3 665 aaPredicted RBP12.33□□□□□ -0.44
TMF1-201ENST00000398559 EXOSC4Q9NPD3 245 aaKnown RBP12.33□□□□□ -0.44
TMF1-201ENST00000398559 ALG6Q9Y672 507 aa12.33□□□□□ -0.44
TMF1-201ENST00000398559 HNRNPRO43390 633 aaKnown RBP12.32□□□□□ -0.44
TMF1-201ENST00000398559 SPAG6O75602 509 aa12.32□□□□□ -0.44
TMF1-201ENST00000398559 POLBP06746 335 aa12.32□□□□□ -0.44
TMF1-201ENST00000398559 RUNX1T1Q06455 604 aa12.32□□□□□ -0.44
TMF1-201ENST00000398559 RAD51Q06609 339 aa12.32□□□□□ -0.44
TMF1-201ENST00000398559 RCN1Q15293 331 aa12.32□□□□□ -0.44
TMF1-201ENST00000398559 WLSQ5T9L3 541 aa12.32□□□□□ -0.44
TMF1-201ENST00000398559 MROH9Q5TGP6 573 aa12.32□□□□□ -0.44
TMF1-201ENST00000398559 SLC25A41Q8N5S1 370 aa12.32□□□□□ -0.44
TMF1-201ENST00000398559 APPL2Q8NEU8 664 aa12.32□□□□□ -0.44
TMF1-201ENST00000398559 SNRNP27Q8WVK2 155 aaKnown RBP12.32□□□□□ -0.44
TMF1-201ENST00000398559 CAB39Q9Y376 341 aaPredicted RBP12.32□□□□□ -0.44
TMF1-201ENST00000398559 CDY2AQ9Y6F7 541 aa12.32□□□□□ -0.44
TMF1-201ENST00000398559 CDY1Q9Y6F8 540 aa12.32□□□□□ -0.44
TMF1-201ENST00000398559 KLRC1P26715 233 aa12.32□□□□□ -0.44
TMF1-201ENST00000398559 TRAF7Q6Q0C0 670 aa12.32□□□□□ -0.44
TMF1-201ENST00000398559 KDM7AQ6ZMT4 941 aa12.32□□□□□ -0.44
TMF1-201ENST00000398559 ARHGEF1Q92888 912 aaKnown RBP12.32□□□□□ -0.44
TMF1-201ENST00000398559 PNKPQ96T60 521 aa12.32□□□□□ -0.44
TMF1-201ENST00000398559 GIMAP4Q9NUV9 329 aa12.32□□□□□ -0.44
TMF1-201ENST00000398559 RHBDL2Q9NX52 303 aa12.32□□□□□ -0.44
TMF1-201ENST00000398559 PKP3Q9Y446 797 aa12.32□□□□□ -0.44
TMF1-201ENST00000398559 SNX9Q9Y5X1 595 aa12.32□□□□□ -0.44
TMF1-201ENST00000398559 ARHGEF40Q8TER5 1519 aa12.32□□□□□ -0.44
TMF1-201ENST00000398559 NEO1Q92859 1461 aa12.32□□□□□ -0.44
TMF1-201ENST00000398559 SERPINB1P30740 379 aa12.32□□□□□ -0.44
TMF1-201ENST00000398559 PPP3CCP48454 512 aa12.32□□□□□ -0.44
TMF1-201ENST00000398559 FAM84BQ96KN1 310 aaPredicted RBP12.32□□□□□ -0.44
TMF1-201ENST00000398559 HPS4Q9NQG7 708 aa12.32□□□□□ -0.44
TMF1-201ENST00000398559 CHORDC1Q9UHD1 332 aaPredicted RBP12.32□□□□□ -0.44
TMF1-201ENST00000398559 KCNK10P57789 538 aa12.32□□□□□ -0.44
TMF1-201ENST00000398559 OVGP1Q12889 678 aa12.32□□□□□ -0.44
TMF1-201ENST00000398559 SGSM1Q2NKQ1 1148 aa12.32□□□□□ -0.44
TMF1-201ENST00000398559 GJB7Q6PEY0 223 aa12.32□□□□□ -0.44
TMF1-201ENST00000398559 CCDC81Q6ZN84 652 aa12.32□□□□□ -0.44
TMF1-201ENST00000398559 NSMCE4AQ9NXX6 385 aa12.32□□□□□ -0.44
TMF1-201ENST00000398559 MAGEA13PA6NCF6 341 aa12.32□□□□□ -0.44
TMF1-201ENST00000398559 COL23A1Q86Y22 540 aaPredicted RBP12.32□□□□□ -0.44
TMF1-201ENST00000398559 BTN2A2Q8WVV5 523 aa12.32□□□□□ -0.44
TMF1-201ENST00000398559 SERPINB12Q96P63 405 aa12.32□□□□□ -0.44
TMF1-201ENST00000398559 MED15Q96RN5 788 aa12.32□□□□□ -0.44
TMF1-201ENST00000398559 COPG1Q9Y678 874 aaKnown RBP12.32□□□□□ -0.44
TMF1-201ENST00000398559 ADGRL3Q9HAR2 1447 aa12.32□□□□□ -0.44
TMF1-201ENST00000398559 AASDHQ4L235 1098 aaPredicted RBP12.31□□□□□ -0.44
TMF1-201ENST00000398559 TTC33Q6PID6 262 aaPredicted RBP12.31□□□□□ -0.44
TMF1-201ENST00000398559 RINLQ6ZS11 566 aa12.31□□□□□ -0.44
TMF1-201ENST00000398559 USP49Q70CQ1 688 aa12.31□□□□□ -0.44
TMF1-201ENST00000398559 PPIL6Q8IXY8 311 aa12.31□□□□□ -0.44
TMF1-201ENST00000398559 SNX31Q8N9S9 440 aa12.31□□□□□ -0.44
TMF1-201ENST00000398559 FAM71DQ8N9W8 422 aa12.31□□□□□ -0.44
TMF1-201ENST00000398559 KRT35Q92764 455 aa12.31□□□□□ -0.44
TMF1-201ENST00000398559 NARFQ9UHQ1 456 aa12.31□□□□□ -0.44
TMF1-201ENST00000398559 PHTF1Q9UMS5 762 aa12.31□□□□□ -0.44
TMF1-201ENST00000398559 POLR1AO95602 1720 aaPredicted RBP12.31□□□□□ -0.44
TMF1-201ENST00000398559 PDGFRBP09619 1106 aa12.31□□□□□ -0.44
TMF1-201ENST00000398559 NQO1P15559 274 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms