RNA–Protein interactions for RNA: ENST00000398519.9

CSNK1D-204, Transcript of casein kinase 1 delta, humanhuman

TSL 5 BASIC

Gene CSNK1D, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-204ENST00000398519 NSUN3Q9H649 340 aaKnown RBP18.65■□□□□ 0.58
CSNK1D-204ENST00000398519 SSX2IPQ9Y2D8 614 aa18.65■□□□□ 0.58
CSNK1D-204ENST00000398519 COQ4Q9Y3A0 265 aa18.65■□□□□ 0.58
CSNK1D-204ENST00000398519 MYO7AQ13402 2215 aa18.64■□□□□ 0.58
CSNK1D-204ENST00000398519 CYP11A1P05108 521 aa18.64■□□□□ 0.58
CSNK1D-204ENST00000398519 ZNF18P17022 549 aa18.64■□□□□ 0.58
CSNK1D-204ENST00000398519 TYMPP19971 482 aa18.64■□□□□ 0.58
CSNK1D-204ENST00000398519 MRPL58Q14197 206 aaKnown RBP18.64■□□□□ 0.58
CSNK1D-204ENST00000398519 PSMD5Q16401 504 aa18.64■□□□□ 0.58
CSNK1D-204ENST00000398519 SGSM1Q2NKQ1 1148 aa18.64■□□□□ 0.58
CSNK1D-204ENST00000398519 WDR72Q3MJ13 1102 aa18.64■□□□□ 0.58
CSNK1D-204ENST00000398519 TUBGCP2Q9BSJ2 902 aa18.64■□□□□ 0.58
CSNK1D-204ENST00000398519 RXFP1Q9HBX9 757 aa18.64■□□□□ 0.58
CSNK1D-204ENST00000398519 CBX8Q9HC52 389 aa18.64■□□□□ 0.58
CSNK1D-204ENST00000398519 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.64■□□□□ 0.583e-7■■■■■ 45.1
CSNK1D-204ENST00000398519 RAB20Q9NX57 234 aa18.64■□□□□ 0.58
CSNK1D-204ENST00000398519 L1RE1Q9UN81 338 aa18.64■□□□□ 0.58
CSNK1D-204ENST00000398519 PMM2O15305 246 aa18.64■□□□□ 0.57
CSNK1D-204ENST00000398519 N4BP1O75113 896 aaKnown RBP18.64■□□□□ 0.57
CSNK1D-204ENST00000398519 CAVIN2O95810 425 aa18.64■□□□□ 0.57
CSNK1D-204ENST00000398519 CNPP09543 421 aaKnown RBP18.64■□□□□ 0.57
CSNK1D-204ENST00000398519 RPL17P18621 184 aaKnown RBP18.64■□□□□ 0.57
CSNK1D-204ENST00000398519 YWHAHQ04917 246 aaPredicted RBP18.64■□□□□ 0.57
CSNK1D-204ENST00000398519 MAN2A1Q16706 1144 aa18.64■□□□□ 0.57
CSNK1D-204ENST00000398519 SOWAHAQ2M3V2 549 aa18.64■□□□□ 0.57
CSNK1D-204ENST00000398519 TCEAL5Q5H9L2 206 aa18.64■□□□□ 0.57
CSNK1D-204ENST00000398519 MIIPQ5JXC2 388 aa18.64■□□□□ 0.57
CSNK1D-204ENST00000398519 WSCD1Q658N2 575 aa18.64■□□□□ 0.57
CSNK1D-204ENST00000398519 SPOPLQ6IQ16 392 aa18.64■□□□□ 0.57
CSNK1D-204ENST00000398519 PDXDC1Q6P996 788 aa18.64■□□□□ 0.57
CSNK1D-204ENST00000398519 ANKS3Q6ZW76 656 aa18.64■□□□□ 0.57
CSNK1D-204ENST00000398519 LIMS2Q7Z4I7 341 aa18.64■□□□□ 0.57
CSNK1D-204ENST00000398519 MICALL1Q8N3F8 863 aa18.64■□□□□ 0.57
CSNK1D-204ENST00000398519 PDCL2Q8N4E4 241 aa18.64■□□□□ 0.57
CSNK1D-204ENST00000398519 TAF4BQ92750 862 aa18.64■□□□□ 0.57
CSNK1D-204ENST00000398519 MTRRQ9UBK8 725 aa18.64■□□□□ 0.57
CSNK1D-204ENST00000398519 POLIQ9UNA4 740 aa18.64■□□□□ 0.57
CSNK1D-204ENST00000398519 ARHGEF37A1IGU5 675 aa18.63■□□□□ 0.57
CSNK1D-204ENST00000398519 SMTNL1A8MU46 457 aa18.63■□□□□ 0.57
CSNK1D-204ENST00000398519 PER2O15055 1255 aa18.63■□□□□ 0.57
CSNK1D-204ENST00000398519 P4HA2O15460 535 aa18.63■□□□□ 0.57
CSNK1D-204ENST00000398519 TEX28O15482 410 aa18.63■□□□□ 0.57
CSNK1D-204ENST00000398519 HUS1O60921 280 aa18.63■□□□□ 0.57
CSNK1D-204ENST00000398519 CLSTN1O94985 981 aa18.63■□□□□ 0.57
CSNK1D-204ENST00000398519 OAZ2O95190 189 aa18.63■□□□□ 0.57
CSNK1D-204ENST00000398519 PRKCSHP14314 528 aaPredicted RBP18.63■□□□□ 0.57
CSNK1D-204ENST00000398519 ZNF445P59923 1031 aa18.63■□□□□ 0.57
CSNK1D-204ENST00000398519 NOP14P78316 857 aaKnown RBP18.63■□□□□ 0.57
CSNK1D-204ENST00000398519 OVOS1Q6IE37 1185 aa18.63■□□□□ 0.57
CSNK1D-204ENST00000398519 RSPO2Q6UXX9 243 aaPredicted RBP18.63■□□□□ 0.57
CSNK1D-204ENST00000398519 RBM23Q86U06 439 aaKnown RBP18.63■□□□□ 0.57
CSNK1D-204ENST00000398519 LUZP1Q86V48 1076 aa18.63■□□□□ 0.57
CSNK1D-204ENST00000398519 TOP6BLQ8N6T0 577 aa18.63■□□□□ 0.57
CSNK1D-204ENST00000398519 KLHL5Q96PQ7 755 aa18.63■□□□□ 0.57
CSNK1D-204ENST00000398519 APOBEC3GQ9HC16 384 aaKnown RBP18.63■□□□□ 0.57
CSNK1D-204ENST00000398519 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.63■□□□□ 0.57
CSNK1D-204ENST00000398519 NXF1Q9UBU9 619 aaKnown RBP18.63■□□□□ 0.57
CSNK1D-204ENST00000398519 DSEQ9UL01 958 aa18.63■□□□□ 0.57
CSNK1D-204ENST00000398519 TBC1D4O60343 1298 aa18.62■□□□□ 0.57
CSNK1D-204ENST00000398519 GTF2F1P35269 517 aaKnown RBP eCLIP18.62■□□□□ 0.571e-7■■■■■ 38.7
CSNK1D-204ENST00000398519 NRIP1P48552 1158 aa18.62■□□□□ 0.57
CSNK1D-204ENST00000398519 TNNC1P63316 161 aa18.62■□□□□ 0.57
CSNK1D-204ENST00000398519 CREMQ03060 361 aa18.62■□□□□ 0.57
CSNK1D-204ENST00000398519 KRT31Q15323 416 aa18.62■□□□□ 0.57
CSNK1D-204ENST00000398519 VWA3BQ502W6 1294 aa18.62■□□□□ 0.57
CSNK1D-204ENST00000398519 ZNF667Q5HYK9 610 aa18.62■□□□□ 0.57
CSNK1D-204ENST00000398519 MMS19Q96T76 1030 aa18.62■□□□□ 0.57
CSNK1D-204ENST00000398519 CLSTN3Q9BQT9 956 aa18.62■□□□□ 0.57
CSNK1D-204ENST00000398519 EMILIN2Q9BXX0 1053 aa18.62■□□□□ 0.57
CSNK1D-204ENST00000398519 IMPG2Q9BZV3 1241 aa18.62■□□□□ 0.57
CSNK1D-204ENST00000398519 TSPY26PQ9H489 355 aa18.62■□□□□ 0.57
CSNK1D-204ENST00000398519 TLE6Q9H808 572 aa18.62■□□□□ 0.57
CSNK1D-204ENST00000398519 FNIP2Q9P278 1114 aa18.62■□□□□ 0.57
CSNK1D-204ENST00000398519 BACE2Q9Y5Z0 518 aa18.62■□□□□ 0.57
CSNK1D-204ENST00000398519 XIRP2A4UGR9 3374 aa18.62■□□□□ 0.57
CSNK1D-204ENST00000398519 BECN2A8MW95 431 aa18.61■□□□□ 0.57
CSNK1D-204ENST00000398519 H7C4K7 107 aa18.61■□□□□ 0.57
CSNK1D-204ENST00000398519 ADAM12O43184 909 aa18.61■□□□□ 0.57
CSNK1D-204ENST00000398519 CLASP2O75122 1294 aaKnown RBP18.61■□□□□ 0.57
CSNK1D-204ENST00000398519 ATP1A3P13637 1013 aa18.61■□□□□ 0.57
CSNK1D-204ENST00000398519 HYAL1Q12794 435 aa18.61■□□□□ 0.57
CSNK1D-204ENST00000398519 DUSP6Q16828 381 aa18.61■□□□□ 0.57
CSNK1D-204ENST00000398519 CTXN3Q4LDR2 81 aa18.61■□□□□ 0.57
CSNK1D-204ENST00000398519 ZNF280DQ6N043 979 aa18.61■□□□□ 0.57
CSNK1D-204ENST00000398519 DPH6Q7L8W6 267 aa18.61■□□□□ 0.57
CSNK1D-204ENST00000398519 GLYCTKQ8IVS8 523 aa18.61■□□□□ 0.57
CSNK1D-204ENST00000398519 ADGRF2Q8IZF7 708 aa18.61■□□□□ 0.57
CSNK1D-204ENST00000398519 TMEM86AQ8N2M4 240 aa18.61■□□□□ 0.57
CSNK1D-204ENST00000398519 FAM200AQ8TCP9 573 aa18.61■□□□□ 0.57
CSNK1D-204ENST00000398519 KBTBD7Q8WVZ9 684 aa18.61■□□□□ 0.57
CSNK1D-204ENST00000398519 PPP2R3CQ969Q6 453 aa18.61■□□□□ 0.57
CSNK1D-204ENST00000398519 RTP3Q9BQQ7 232 aa18.61■□□□□ 0.57
CSNK1D-204ENST00000398519 NDST4Q9H3R1 872 aa18.61■□□□□ 0.57
CSNK1D-204ENST00000398519 TAB2Q9NYJ8 693 aa18.61■□□□□ 0.57
CSNK1D-204ENST00000398519 FBXL5Q9UKA1 691 aa18.61■□□□□ 0.57
CSNK1D-204ENST00000398519 ASPAP45381 313 aa18.6■□□□□ 0.57
CSNK1D-204ENST00000398519 NDUFV1P49821 464 aa18.6■□□□□ 0.57
CSNK1D-204ENST00000398519 SLC8B1Q6J4K2 584 aa18.6■□□□□ 0.57
CSNK1D-204ENST00000398519 SCARA5Q6ZMJ2 495 aa18.6■□□□□ 0.57
CSNK1D-204ENST00000398519 METTL23Q86XA0 190 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms