RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 BIRC3Q13489 604 aa16.97■□□□□ 0.31
MBD1-207ENST00000398488 SV2CQ496J9 727 aa16.97■□□□□ 0.31
MBD1-207ENST00000398488 C11orf57Q6ZUT1 292 aaPredicted RBP16.97■□□□□ 0.31
MBD1-207ENST00000398488 ANKS3Q6ZW76 656 aa16.97■□□□□ 0.31
MBD1-207ENST00000398488 LIMS2Q7Z4I7 341 aa16.97■□□□□ 0.31
MBD1-207ENST00000398488 OR10T2Q8NGX3 314 aa16.97■□□□□ 0.31
MBD1-207ENST00000398488 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.97■□□□□ 0.31
MBD1-207ENST00000398488 PPP2R3CQ969Q6 453 aa16.97■□□□□ 0.31
MBD1-207ENST00000398488 ZNF560Q96MR9 790 aa16.97■□□□□ 0.31
MBD1-207ENST00000398488 CEP63Q96MT8 703 aa16.97■□□□□ 0.31
MBD1-207ENST00000398488 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.97■□□□□ 0.31
MBD1-207ENST00000398488 POLIQ9UNA4 740 aa16.97■□□□□ 0.31
MBD1-207ENST00000398488 NME7Q9Y5B8 376 aa16.97■□□□□ 0.31
MBD1-207ENST00000398488 SNX9Q9Y5X1 595 aa16.97■□□□□ 0.31
MBD1-207ENST00000398488 IKBKBO14920 756 aa16.96■□□□□ 0.31
MBD1-207ENST00000398488 VNN2O95498 520 aa16.96■□□□□ 0.31
MBD1-207ENST00000398488 KRT13P13646 458 aa16.96■□□□□ 0.31
MBD1-207ENST00000398488 TYMPP19971 482 aa16.96■□□□□ 0.31
MBD1-207ENST00000398488 KCNQ1P51787 676 aa16.96■□□□□ 0.31
MBD1-207ENST00000398488 ARPP19P56211 112 aa16.96■□□□□ 0.31
MBD1-207ENST00000398488 SOWAHAQ2M3V2 549 aa16.96■□□□□ 0.31
MBD1-207ENST00000398488 CTXN3Q4LDR2 81 aa16.96■□□□□ 0.31
MBD1-207ENST00000398488 CBWD6Q4V339 395 aa16.96■□□□□ 0.31
MBD1-207ENST00000398488 CBWD3Q5JTY5 395 aa16.96■□□□□ 0.31
MBD1-207ENST00000398488 CBWD5Q5RIA9 395 aa16.96■□□□□ 0.31
MBD1-207ENST00000398488 SPOPLQ6IQ16 392 aa16.96■□□□□ 0.31
MBD1-207ENST00000398488 PDCL2Q8N4E4 241 aa16.96■□□□□ 0.31
MBD1-207ENST00000398488 APPL2Q8NEU8 664 aa16.96■□□□□ 0.31
MBD1-207ENST00000398488 TAS1R2Q8TE23 839 aa16.96■□□□□ 0.31
MBD1-207ENST00000398488 SEMA4DQ92854 862 aa16.96■□□□□ 0.31
MBD1-207ENST00000398488 SLC35C1Q96A29 364 aa16.96■□□□□ 0.31
MBD1-207ENST00000398488 PI4K2AQ9BTU6 479 aa16.96■□□□□ 0.31
MBD1-207ENST00000398488 GDAP2Q9NXN4 497 aa16.96■□□□□ 0.31
MBD1-207ENST00000398488 WDR27A2RRH5 827 aa16.96■□□□□ 0.3
MBD1-207ENST00000398488 PHACTR2O75167 634 aa16.96■□□□□ 0.3
MBD1-207ENST00000398488 HLA-DRAP01903 254 aa16.96■□□□□ 0.3
MBD1-207ENST00000398488 ADH1AP07327 375 aa16.96■□□□□ 0.3
MBD1-207ENST00000398488 ODC1P11926 461 aa16.96■□□□□ 0.3
MBD1-207ENST00000398488 PNPLA4P41247 253 aa16.96■□□□□ 0.3
MBD1-207ENST00000398488 ROR1Q01973 937 aa16.96■□□□□ 0.3
MBD1-207ENST00000398488 YWHAHQ04917 246 aaPredicted RBP16.96■□□□□ 0.3
MBD1-207ENST00000398488 NCOA4Q13772 614 aa16.96■□□□□ 0.3
MBD1-207ENST00000398488 RAB33AQ14088 237 aa16.96■□□□□ 0.3
MBD1-207ENST00000398488 CCDC142Q17RM4 750 aa16.96■□□□□ 0.3
MBD1-207ENST00000398488 KLHL40Q2TBA0 621 aa16.96■□□□□ 0.3
MBD1-207ENST00000398488 OVOS1Q6IE37 1185 aa16.96■□□□□ 0.3
MBD1-207ENST00000398488 SLC8B1Q6J4K2 584 aa16.96■□□□□ 0.3
MBD1-207ENST00000398488 ANKRD54Q6NXT1 300 aa16.96■□□□□ 0.3
MBD1-207ENST00000398488 KBTBD7Q8WVZ9 684 aa16.96■□□□□ 0.3
MBD1-207ENST00000398488 S1PR5Q9H228 398 aa16.96■□□□□ 0.3
MBD1-207ENST00000398488 ARMCX3Q9UH62 379 aaPredicted RBP16.96■□□□□ 0.3
MBD1-207ENST00000398488 COG5Q9UP83 839 aa16.96■□□□□ 0.3
MBD1-207ENST00000398488 GRXCR2A6NFK2 248 aa16.95■□□□□ 0.3
MBD1-207ENST00000398488 NCK2O43639 380 aa16.95■□□□□ 0.3
MBD1-207ENST00000398488 WEE2P0C1S8 567 aa16.95■□□□□ 0.3
MBD1-207ENST00000398488 AP3M2P53677 418 aa16.95■□□□□ 0.3
MBD1-207ENST00000398488 ENPEPQ07075 957 aa16.95■□□□□ 0.3
MBD1-207ENST00000398488 DCAF17Q5H9S7 520 aaPredicted RBP16.95■□□□□ 0.3
MBD1-207ENST00000398488 FRMD5Q7Z6J6 570 aa16.95■□□□□ 0.3
MBD1-207ENST00000398488 LRRTM3Q86VH5 581 aa16.95■□□□□ 0.3
MBD1-207ENST00000398488 SDCBP2Q9H190 292 aa16.95■□□□□ 0.3
MBD1-207ENST00000398488 APOBEC3GQ9HC16 384 aaKnown RBP16.95■□□□□ 0.3
MBD1-207ENST00000398488 MAN1C1Q9NR34 630 aa16.95■□□□□ 0.3
MBD1-207ENST00000398488 THEGQ9P2T0 379 aa16.95■□□□□ 0.3
MBD1-207ENST00000398488 RFPL2O75678 378 aa16.94■□□□□ 0.3
MBD1-207ENST00000398488 SEC24AO95486 1093 aa16.94■□□□□ 0.3
MBD1-207ENST00000398488 GLUD1P00367 558 aa16.94■□□□□ 0.3
MBD1-207ENST00000398488 PAX3P23760 479 aa16.94■□□□□ 0.3
MBD1-207ENST00000398488 ERCC5P28715 1186 aaPredicted RBP16.94■□□□□ 0.3
MBD1-207ENST00000398488 TRPC3Q13507 836 aa16.94■□□□□ 0.3
MBD1-207ENST00000398488 WDR72Q3MJ13 1102 aa16.94■□□□□ 0.3
MBD1-207ENST00000398488 CCDC40Q4G0X9 1142 aa16.94■□□□□ 0.3
MBD1-207ENST00000398488 HSP90AA4PQ58FG1 418 aa16.94■□□□□ 0.3
MBD1-207ENST00000398488 TCERG1LQ5VWI1 586 aa16.94■□□□□ 0.3
MBD1-207ENST00000398488 ZNF280DQ6N043 979 aa16.94■□□□□ 0.3
MBD1-207ENST00000398488 PDXDC1Q6P996 788 aa16.94■□□□□ 0.3
MBD1-207ENST00000398488 RNF19BQ6ZMZ0 732 aa16.94■□□□□ 0.3
MBD1-207ENST00000398488 PPFIBP1Q86W92 1011 aa16.94■□□□□ 0.3
MBD1-207ENST00000398488 TRIM59Q8IWR1 403 aa16.94■□□□□ 0.3
MBD1-207ENST00000398488 CASP10Q92851 521 aa16.94■□□□□ 0.3
MBD1-207ENST00000398488 MRPL45Q9BRJ2 306 aaKnown RBP16.94■□□□□ 0.3
MBD1-207ENST00000398488 CRISPLD1Q9H336 500 aa16.94■□□□□ 0.3
MBD1-207ENST00000398488 TMEM8AQ9HCN3 771 aa16.94■□□□□ 0.3
MBD1-207ENST00000398488 NXF1Q9UBU9 619 aaKnown RBP16.94■□□□□ 0.3
MBD1-207ENST00000398488 FBXW11Q9UKB1 542 aa16.94■□□□□ 0.3
MBD1-207ENST00000398488 C5orf42Q9H799 3197 aa16.93■□□□□ 0.3
MBD1-207ENST00000398488 H7C4K7 107 aa16.93■□□□□ 0.3
MBD1-207ENST00000398488 ABLIM3O94929 683 aa16.93■□□□□ 0.3
MBD1-207ENST00000398488 STAU1O95793 577 aaKnown RBP16.93■□□□□ 0.3
MBD1-207ENST00000398488 ACAT1P24752 427 aaKnown RBP16.93■□□□□ 0.3
MBD1-207ENST00000398488 LMO2P25791 158 aa16.93■□□□□ 0.3
MBD1-207ENST00000398488 RAP1GAPP47736 663 aa16.93■□□□□ 0.3
MBD1-207ENST00000398488 CDH8P55286 799 aa16.93■□□□□ 0.3
MBD1-207ENST00000398488 CREMQ03060 361 aa16.93■□□□□ 0.3
MBD1-207ENST00000398488 TYRO3Q06418 890 aa16.93■□□□□ 0.3
MBD1-207ENST00000398488 MYO1EQ12965 1108 aa16.93■□□□□ 0.3
MBD1-207ENST00000398488 LEXMQ3ZCV2 418 aa16.93■□□□□ 0.3
MBD1-207ENST00000398488 SASS6Q6UVJ0 657 aa16.93■□□□□ 0.3
MBD1-207ENST00000398488 USP37Q86T82 979 aa16.93■□□□□ 0.3
MBD1-207ENST00000398488 KREMEN2Q8NCW0 462 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms