RNA–Protein interactions for RNA: ENST00000398073.6

CTDSP2-201, Transcript of CTD small phosphatase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP2, Length 4,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-201ENST00000398073 RXFP1Q9HBX9 757 aa17.19■□□□□ 0.34
CTDSP2-201ENST00000398073 ATP8B3O60423 1300 aa17.19■□□□□ 0.34
CTDSP2-201ENST00000398073 RNF225M0QZC1 329 aaPredicted RBP17.19■□□□□ 0.34
CTDSP2-201ENST00000398073 PYGBP11216 843 aa17.19■□□□□ 0.34
CTDSP2-201ENST00000398073 CASP2P42575 452 aa17.19■□□□□ 0.34
CTDSP2-201ENST00000398073 SESN2P58004 480 aaPredicted RBP17.19■□□□□ 0.34
CTDSP2-201ENST00000398073 VPS72Q15906 364 aa17.19■□□□□ 0.34
CTDSP2-201ENST00000398073 C3orf67Q6ZVT6 689 aa17.19■□□□□ 0.34
CTDSP2-201ENST00000398073 IRF2BP1Q8IU81 584 aa17.19■□□□□ 0.34
CTDSP2-201ENST00000398073 RNF139Q8WU17 664 aa17.19■□□□□ 0.34
CTDSP2-201ENST00000398073 AGBL1Q96MI9 1066 aa17.19■□□□□ 0.34
CTDSP2-201ENST00000398073 KIFC3Q9BVG8 833 aa17.19■□□□□ 0.34
CTDSP2-201ENST00000398073 GGA2Q9UJY4 613 aa17.19■□□□□ 0.34
CTDSP2-201ENST00000398073 MST1RQ04912 1400 aa17.19■□□□□ 0.34
CTDSP2-201ENST00000398073 SMIM22K7EJ46 135 aa17.19■□□□□ 0.34
CTDSP2-201ENST00000398073 PROSCO94903 275 aa17.19■□□□□ 0.34
CTDSP2-201ENST00000398073 KIF19Q2TAC6 998 aa17.19■□□□□ 0.34
CTDSP2-201ENST00000398073 COBLL1Q53SF7 1204 aa17.19■□□□□ 0.34
CTDSP2-201ENST00000398073 PID1Q7Z2X4 250 aa17.19■□□□□ 0.34
CTDSP2-201ENST00000398073 CEP70Q8NHQ1 597 aa17.19■□□□□ 0.34
CTDSP2-201ENST00000398073 ATXN2LQ8WWM7 1075 aaKnown RBP17.19■□□□□ 0.34
CTDSP2-201ENST00000398073 SPATA31A5Q5VU36 1347 aa17.19■□□□□ 0.34
CTDSP2-201ENST00000398073 SPATA31A7Q8IWB4 1347 aa17.19■□□□□ 0.34
CTDSP2-201ENST00000398073 CACNA1FO60840 1977 aa17.19■□□□□ 0.34
CTDSP2-201ENST00000398073 A8MXQ7 604 aa17.19■□□□□ 0.34
CTDSP2-201ENST00000398073 PPP1R12AO14974 1030 aaPredicted RBP17.19■□□□□ 0.34
CTDSP2-201ENST00000398073 ARP10275 920 aa17.19■□□□□ 0.34
CTDSP2-201ENST00000398073 MDH1BQ5I0G3 518 aa17.19■□□□□ 0.34
CTDSP2-201ENST00000398073 MTHFD1LQ6UB35 978 aa17.19■□□□□ 0.34
CTDSP2-201ENST00000398073 RYBPQ8N488 228 aaPredicted RBP17.19■□□□□ 0.34
CTDSP2-201ENST00000398073 E2F7Q96AV8 911 aa17.19■□□□□ 0.34
CTDSP2-201ENST00000398073 TRPV6Q9H1D0 765 aa17.19■□□□□ 0.34
CTDSP2-201ENST00000398073 PCMTD2Q9NV79 361 aa17.19■□□□□ 0.34
CTDSP2-201ENST00000398073 DONSONQ9NYP3 566 aa17.19■□□□□ 0.34
CTDSP2-201ENST00000398073 ZNF70Q9UC06 446 aaPredicted RBP17.19■□□□□ 0.34
CTDSP2-201ENST00000398073 ANGPTL3Q9Y5C1 460 aa17.19■□□□□ 0.34
CTDSP2-201ENST00000398073 ENO4A6NNW6 628 aa17.18■□□□□ 0.34
CTDSP2-201ENST00000398073 F5H423 210 aaPredicted RBP17.18■□□□□ 0.34
CTDSP2-201ENST00000398073 ATP6V1G2O95670 118 aa17.18■□□□□ 0.34
CTDSP2-201ENST00000398073 RFC5P40937 340 aa17.18■□□□□ 0.34
CTDSP2-201ENST00000398073 IREB2P48200 963 aaKnown RBP17.18■□□□□ 0.34
CTDSP2-201ENST00000398073 CTCFP49711 727 aaPredicted RBP17.18■□□□□ 0.34
CTDSP2-201ENST00000398073 TMED1Q13445 227 aa17.18■□□□□ 0.34
CTDSP2-201ENST00000398073 MTMR2Q13614 643 aa17.18■□□□□ 0.34
CTDSP2-201ENST00000398073 SYCP2LQ5T4T6 812 aa17.18■□□□□ 0.34
CTDSP2-201ENST00000398073 DSTYKQ6XUX3 929 aa17.18■□□□□ 0.34
CTDSP2-201ENST00000398073 EXD1Q8NHP7 514 aa17.18■□□□□ 0.34
CTDSP2-201ENST00000398073 KCNK16Q96T55 309 aa17.18■□□□□ 0.34
CTDSP2-201ENST00000398073 LBHD1Q9BQE6 289 aaPredicted RBP17.18■□□□□ 0.34
CTDSP2-201ENST00000398073 FRMD8P1Q9BZ68 369 aaPredicted RBP17.18■□□□□ 0.34
CTDSP2-201ENST00000398073 ADA2Q9NZK5 511 aa17.18■□□□□ 0.34
CTDSP2-201ENST00000398073 POLLQ9UGP5 575 aa17.18■□□□□ 0.34
CTDSP2-201ENST00000398073 PIK3R2O00459 728 aa17.18■□□□□ 0.34
CTDSP2-201ENST00000398073 DNAJC8O75937 253 aaPredicted RBP17.18■□□□□ 0.34
CTDSP2-201ENST00000398073 STIP1P31948 543 aaKnown RBP17.18■□□□□ 0.34
CTDSP2-201ENST00000398073 RPL21P46778 160 aaKnown RBP17.18■□□□□ 0.34
CTDSP2-201ENST00000398073 ERFP50548 548 aa17.18■□□□□ 0.34
CTDSP2-201ENST00000398073 MCL1Q07820 350 aa17.18■□□□□ 0.34
CTDSP2-201ENST00000398073 COG2Q14746 738 aa17.18■□□□□ 0.34
CTDSP2-201ENST00000398073 TTC39BQ5VTQ0 682 aaPredicted RBP17.18■□□□□ 0.34
CTDSP2-201ENST00000398073 DAB2IPQ5VWQ8 1189 aa17.18■□□□□ 0.34
CTDSP2-201ENST00000398073 FOXR2Q6PJQ5 311 aa17.18■□□□□ 0.34
CTDSP2-201ENST00000398073 TNFRSF25Q93038 417 aa17.18■□□□□ 0.34
CTDSP2-201ENST00000398073 TARS2Q9BW92 718 aaKnown RBP17.18■□□□□ 0.34
CTDSP2-201ENST00000398073 HAO1Q9UJM8 370 aa17.18■□□□□ 0.34
CTDSP2-201ENST00000398073 ORC6Q9Y5N6 252 aa17.18■□□□□ 0.34
CTDSP2-201ENST00000398073 IL1R1P14778 569 aa17.18■□□□□ 0.34
CTDSP2-201ENST00000398073 PMLP29590 882 aa17.18■□□□□ 0.34
CTDSP2-201ENST00000398073 DALRD3Q5D0E6 543 aaKnown RBP17.18■□□□□ 0.34
CTDSP2-201ENST00000398073 GMCL1P1Q8NEA9 526 aa17.18■□□□□ 0.34
CTDSP2-201ENST00000398073 FAM193BQ96PV7 902 aaPredicted RBP17.18■□□□□ 0.34
CTDSP2-201ENST00000398073 GPRC5CQ9NQ84 441 aa17.18■□□□□ 0.34
CTDSP2-201ENST00000398073 APOEP02649 317 aa17.17■□□□□ 0.34
CTDSP2-201ENST00000398073 GARTP22102 1010 aa17.17■□□□□ 0.34
CTDSP2-201ENST00000398073 SMTNL2Q2TAL5 461 aa17.17■□□□□ 0.34
CTDSP2-201ENST00000398073 SLC47A2Q86VL8 602 aa17.17■□□□□ 0.34
CTDSP2-201ENST00000398073 TAS1R2Q8TE23 839 aa17.17■□□□□ 0.34
CTDSP2-201ENST00000398073 SUN2Q9UH99 717 aa17.17■□□□□ 0.34
CTDSP2-201ENST00000398073 CPSF3Q9UKF6 684 aaKnown RBP17.17■□□□□ 0.34
CTDSP2-201ENST00000398073 BTNL10A8MVZ5 291 aa17.17■□□□□ 0.34
CTDSP2-201ENST00000398073 ITGB3BPQ13352 177 aaPredicted RBP17.17■□□□□ 0.34
CTDSP2-201ENST00000398073 MTM1Q13496 603 aa17.17■□□□□ 0.34
CTDSP2-201ENST00000398073 TTLL4Q14679 1199 aa17.17■□□□□ 0.34
CTDSP2-201ENST00000398073 TKFCQ3LXA3 575 aa17.17■□□□□ 0.34
CTDSP2-201ENST00000398073 ZDHHC15Q96MV8 337 aa17.17■□□□□ 0.34
CTDSP2-201ENST00000398073 FSD1LQ9BXM9 530 aa17.17■□□□□ 0.34
CTDSP2-201ENST00000398073 AP5M1Q9H0R1 490 aa17.17■□□□□ 0.34
CTDSP2-201ENST00000398073 MYO5BQ9ULV0 1848 aa17.17■□□□□ 0.34
CTDSP2-201ENST00000398073 WNT7AO00755 349 aa17.17■□□□□ 0.34
CTDSP2-201ENST00000398073 RGL2O15211 777 aa17.17■□□□□ 0.34
CTDSP2-201ENST00000398073 RPS6P62753 249 aaKnown RBP17.17■□□□□ 0.34
CTDSP2-201ENST00000398073 C1orf131Q8NDD1 294 aaKnown RBP17.17■□□□□ 0.34
CTDSP2-201ENST00000398073 KIF12Q96FN5 646 aa17.17■□□□□ 0.34
CTDSP2-201ENST00000398073 SLC24A2Q9UI40 661 aa17.17■□□□□ 0.34
CTDSP2-201ENST00000398073 GRID1Q9ULK0 1009 aa17.17■□□□□ 0.34
CTDSP2-201ENST00000398073 ARHGAP23Q9P227 1491 aa17.17■□□□□ 0.34
CTDSP2-201ENST00000398073 ACADSP16219 412 aa17.17■□□□□ 0.34
CTDSP2-201ENST00000398073 LRRC6Q86X45 466 aa17.17■□□□□ 0.34
CTDSP2-201ENST00000398073 FUKQ8N0W3 1084 aa17.17■□□□□ 0.34
CTDSP2-201ENST00000398073 NDUFAF2Q8N183 169 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms