RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 GLYCTKQ8IVS8 523 aa20.83■□□□□ 0.93
PDLIM2-205ENST00000397761 ATRIPQ8WXE1 791 aa20.83■□□□□ 0.93
PDLIM2-205ENST00000397761 VWCEQ96DN2 955 aa20.83■□□□□ 0.93
PDLIM2-205ENST00000397761 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.83■□□□□ 0.93
PDLIM2-205ENST00000397761 SMYD3Q9H7B4 428 aa20.83■□□□□ 0.93
PDLIM2-205ENST00000397761 GOLGA2P5Q9HBQ8 144 aa20.83■□□□□ 0.93
PDLIM2-205ENST00000397761 TMEM39AQ9NV64 488 aa20.83■□□□□ 0.93
PDLIM2-205ENST00000397761 RCCD1A6NED2 376 aa20.82■□□□□ 0.92
PDLIM2-205ENST00000397761 TNFAIP3P21580 790 aa20.82■□□□□ 0.92
PDLIM2-205ENST00000397761 RPL9P32969 192 aaKnown RBP20.82■□□□□ 0.92
PDLIM2-205ENST00000397761 MAGEA1P43355 309 aa20.82■□□□□ 0.92
PDLIM2-205ENST00000397761 CCL23P55773 120 aa20.82■□□□□ 0.92
PDLIM2-205ENST00000397761 TNNC1P63316 161 aa20.82■□□□□ 0.92
PDLIM2-205ENST00000397761 FMO1Q01740 532 aa20.82■□□□□ 0.92
PDLIM2-205ENST00000397761 ALKBH5Q6P6C2 394 aaKnown RBP20.82■□□□□ 0.92
PDLIM2-205ENST00000397761 SCARA5Q6ZMJ2 495 aa20.82■□□□□ 0.92
PDLIM2-205ENST00000397761 RNF169Q8NCN4 708 aa20.82■□□□□ 0.92
PDLIM2-205ENST00000397761 LUC7LQ9NQ29 371 aaKnown RBP20.82■□□□□ 0.92
PDLIM2-205ENST00000397761 CILPO75339 1184 aa20.81■□□□□ 0.92
PDLIM2-205ENST00000397761 CLSTN1O94985 981 aa20.81■□□□□ 0.92
PDLIM2-205ENST00000397761 GZMAP12544 262 aa20.81■□□□□ 0.92
PDLIM2-205ENST00000397761 TAF6P49848 677 aa20.81■□□□□ 0.92
PDLIM2-205ENST00000397761 LILRA4P59901 499 aa20.81■□□□□ 0.92
PDLIM2-205ENST00000397761 CLLU1OSQ5K130 101 aa20.81■□□□□ 0.92
PDLIM2-205ENST00000397761 KIAA1328Q86T90 577 aa20.81■□□□□ 0.92
PDLIM2-205ENST00000397761 PALB2Q86YC2 1186 aa20.81■□□□□ 0.92
PDLIM2-205ENST00000397761 RPUSD2Q8IZ73 545 aaKnown RBP20.81■□□□□ 0.92
PDLIM2-205ENST00000397761 TXLNBQ8N3L3 684 aa20.81■□□□□ 0.92
PDLIM2-205ENST00000397761 WHAMMQ8TF30 809 aa20.81■□□□□ 0.92
PDLIM2-205ENST00000397761 LACRTQ9GZZ8 138 aa20.81■□□□□ 0.92
PDLIM2-205ENST00000397761 TNRC18O15417 2968 aaPredicted RBP20.81■□□□□ 0.92
PDLIM2-205ENST00000397761 KPNA7A9QM74 516 aa20.81■□□□□ 0.92
PDLIM2-205ENST00000397761 SPTLC1O15269 473 aa20.81■□□□□ 0.92
PDLIM2-205ENST00000397761 ABL1P00519 1130 aa20.81■□□□□ 0.92
PDLIM2-205ENST00000397761 TUBB4AP04350 444 aa20.81■□□□□ 0.92
PDLIM2-205ENST00000397761 PAEPP09466 180 aa20.81■□□□□ 0.92
PDLIM2-205ENST00000397761 CD58P19256 250 aa20.81■□□□□ 0.92
PDLIM2-205ENST00000397761 RAP1GAPP47736 663 aa20.81■□□□□ 0.92
PDLIM2-205ENST00000397761 CDH8P55286 799 aa20.81■□□□□ 0.92
PDLIM2-205ENST00000397761 SV2CQ496J9 727 aa20.81■□□□□ 0.92
PDLIM2-205ENST00000397761 GLB1LQ6UWU2 654 aa20.81■□□□□ 0.92
PDLIM2-205ENST00000397761 PCDHB18PQ96TA0 734 aa20.81■□□□□ 0.92
PDLIM2-205ENST00000397761 INTUQ9ULD6 942 aa20.81■□□□□ 0.92
PDLIM2-205ENST00000397761 BARX2Q9UMQ3 279 aaPredicted RBP20.81■□□□□ 0.92
PDLIM2-205ENST00000397761 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.8■□□□□ 0.92
PDLIM2-205ENST00000397761 KIF2AO00139 706 aaPredicted RBP20.8■□□□□ 0.92
PDLIM2-205ENST00000397761 TIMP1P01033 207 aa20.8■□□□□ 0.92
PDLIM2-205ENST00000397761 MMEP08473 750 aa20.8■□□□□ 0.92
PDLIM2-205ENST00000397761 FAM163BP0C2L3 166 aa20.8■□□□□ 0.92
PDLIM2-205ENST00000397761 RAD23BP54727 409 aa20.8■□□□□ 0.92
PDLIM2-205ENST00000397761 TUSC3Q13454 348 aa20.8■□□□□ 0.92
PDLIM2-205ENST00000397761 PTPN14Q15678 1187 aa20.8■□□□□ 0.92
PDLIM2-205ENST00000397761 ARHGAP29Q52LW3 1261 aa20.8■□□□□ 0.92
PDLIM2-205ENST00000397761 CCDC122Q5T0U0 273 aa20.8■□□□□ 0.92
PDLIM2-205ENST00000397761 C16orf45Q96MC5 204 aaPredicted RBP20.8■□□□□ 0.92
PDLIM2-205ENST00000397761 TSGA10Q9BZW7 698 aa20.8■□□□□ 0.92
PDLIM2-205ENST00000397761 ISCUQ9H1K1 167 aa20.8■□□□□ 0.92
PDLIM2-205ENST00000397761 LZTFL1Q9NQ48 299 aa20.8■□□□□ 0.92
PDLIM2-205ENST00000397761 SNX9Q9Y5X1 595 aa20.8■□□□□ 0.92
PDLIM2-205ENST00000397761 PTPRSQ13332 1948 aa20.79■□□□□ 0.92
PDLIM2-205ENST00000397761 TRIM43BA6NCK2 446 aa20.79■□□□□ 0.92
PDLIM2-205ENST00000397761 KRT86O43790 486 aa20.79■□□□□ 0.92
PDLIM2-205ENST00000397761 TACC1O75410 805 aa20.79■□□□□ 0.92
PDLIM2-205ENST00000397761 GNA15P30679 374 aa20.79■□□□□ 0.92
PDLIM2-205ENST00000397761 AARSP49588 968 aaKnown RBP eCLIP20.79■□□□□ 0.92
PDLIM2-205ENST00000397761 DSC1Q08554 894 aa20.79■□□□□ 0.92
PDLIM2-205ENST00000397761 KIF5AQ12840 1032 aa20.79■□□□□ 0.92
PDLIM2-205ENST00000397761 UPP1Q16831 310 aa20.79■□□□□ 0.92
PDLIM2-205ENST00000397761 SOWAHAQ2M3V2 549 aa20.79■□□□□ 0.92
PDLIM2-205ENST00000397761 DPH6Q7L8W6 267 aa20.79■□□□□ 0.92
PDLIM2-205ENST00000397761 RSPH1Q8WYR4 309 aa20.79■□□□□ 0.92
PDLIM2-205ENST00000397761 TRIM43Q96BQ3 446 aaPredicted RBP20.79■□□□□ 0.92
PDLIM2-205ENST00000397761 DDX27Q96GQ7 796 aaKnown RBP20.79■□□□□ 0.92
PDLIM2-205ENST00000397761 UROC1Q96N76 676 aa20.79■□□□□ 0.92
PDLIM2-205ENST00000397761 TFR2Q9UP52 801 aa20.79■□□□□ 0.92
PDLIM2-205ENST00000397761 BTNL10A8MVZ5 291 aa20.78■□□□□ 0.92
PDLIM2-205ENST00000397761 PODXLO00592 558 aa20.78■□□□□ 0.92
PDLIM2-205ENST00000397761 POMCP01189 267 aa20.78■□□□□ 0.92
PDLIM2-205ENST00000397761 PAX3P23760 479 aa20.78■□□□□ 0.92
PDLIM2-205ENST00000397761 CLCNKBP51801 687 aa20.78■□□□□ 0.92
PDLIM2-205ENST00000397761 NOMO2Q5JPE7 1267 aa20.78■□□□□ 0.92
PDLIM2-205ENST00000397761 TAF3Q5VWG9 929 aa20.78■□□□□ 0.92
PDLIM2-205ENST00000397761 CNKSR3Q6P9H4 555 aa20.78■□□□□ 0.92
PDLIM2-205ENST00000397761 TOP6BLQ8N6T0 577 aa20.78■□□□□ 0.92
PDLIM2-205ENST00000397761 SLC4A11Q8NBS3 891 aa20.78■□□□□ 0.92
PDLIM2-205ENST00000397761 ZNF606Q8WXB4 792 aa20.78■□□□□ 0.92
PDLIM2-205ENST00000397761 TWNKQ96RR1 684 aa20.78■□□□□ 0.92
PDLIM2-205ENST00000397761 MMS19Q96T76 1030 aa20.78■□□□□ 0.92
PDLIM2-205ENST00000397761 ZSWIM1Q9BR11 485 aa20.78■□□□□ 0.92
PDLIM2-205ENST00000397761 ELOVL4Q9GZR5 314 aa20.78■□□□□ 0.92
PDLIM2-205ENST00000397761 RNF216Q9NWF9 866 aaPredicted RBP20.78■□□□□ 0.92
PDLIM2-205ENST00000397761 KANSL3Q9P2N6 904 aa20.78■□□□□ 0.92
PDLIM2-205ENST00000397761 COL4A6Q14031 1691 aa20.77■□□□□ 0.92
PDLIM2-205ENST00000397761 CALCAP01258 141 aa20.77■□□□□ 0.92
PDLIM2-205ENST00000397761 CYP1A1P04798 512 aaPredicted RBP20.77■□□□□ 0.92
PDLIM2-205ENST00000397761 EN2P19622 333 aaPredicted RBP20.77■□□□□ 0.92
PDLIM2-205ENST00000397761 ITGB8P26012 769 aa20.77■□□□□ 0.92
PDLIM2-205ENST00000397761 ETF1P62495 437 aaKnown RBP20.77■□□□□ 0.92
PDLIM2-205ENST00000397761 TRIM72Q6ZMU5 477 aa20.77■□□□□ 0.92
PDLIM2-205ENST00000397761 UNC93AQ86WB7 457 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms