RNA–Protein interactions for RNA: ENST00000397428.7

SYNE4-203, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 382 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-203ENST00000397428 LAIR1Q6GTX8 287 aa12.98□□□□□ -0.33
SYNE4-203ENST00000397428 C1orf228Q6PIY5 440 aa12.98□□□□□ -0.33
SYNE4-203ENST00000397428 HAUS6Q7Z4H7 955 aa12.98□□□□□ -0.33
SYNE4-203ENST00000397428 DNAJB7Q7Z6W7 309 aaPredicted RBP12.98□□□□□ -0.33
SYNE4-203ENST00000397428 ARID3BQ8IVW6 561 aaPredicted RBP12.98□□□□□ -0.33
SYNE4-203ENST00000397428 PIAS4Q8N2W9 510 aaPredicted RBP12.98□□□□□ -0.33
SYNE4-203ENST00000397428 SPEM1Q8N4L4 309 aa12.98□□□□□ -0.33
SYNE4-203ENST00000397428 KIF12Q96FN5 646 aa12.98□□□□□ -0.33
SYNE4-203ENST00000397428 MKNK1Q9BUB5 465 aa12.98□□□□□ -0.33
SYNE4-203ENST00000397428 C8orf33Q9H7E9 229 aaPredicted RBP12.98□□□□□ -0.33
SYNE4-203ENST00000397428 LARSQ9P2J5 1176 aaKnown RBP12.98□□□□□ -0.33
SYNE4-203ENST00000397428 SLC27A5Q9Y2P5 690 aa12.98□□□□□ -0.33
SYNE4-203ENST00000397428 YIPF1Q9Y548 306 aa12.98□□□□□ -0.33
SYNE4-203ENST00000397428 TICRRQ7Z2Z1 1910 aa12.98□□□□□ -0.33
SYNE4-203ENST00000397428 GPR179Q6PRD1 2367 aa12.97□□□□□ -0.33
SYNE4-203ENST00000397428 A0A0B4J269 797 aa12.97□□□□□ -0.33
SYNE4-203ENST00000397428 NPHP3-ACAD11A0A0J9YXS1 232 aa12.97□□□□□ -0.33
SYNE4-203ENST00000397428 PAPSS2O95340 614 aaPredicted RBP12.97□□□□□ -0.33
SYNE4-203ENST00000397428 PIGRP01833 764 aa12.97□□□□□ -0.33
SYNE4-203ENST00000397428 CNR2P34972 360 aa12.97□□□□□ -0.33
SYNE4-203ENST00000397428 ALDH1A3P47895 512 aa12.97□□□□□ -0.33
SYNE4-203ENST00000397428 SATB1Q01826 763 aa12.97□□□□□ -0.33
SYNE4-203ENST00000397428 ENOX2Q16206 610 aaKnown RBP12.97□□□□□ -0.33
SYNE4-203ENST00000397428 ARL6IP4Q66PJ3 421 aaKnown RBP12.97□□□□□ -0.33
SYNE4-203ENST00000397428 DSTYKQ6XUX3 929 aa12.97□□□□□ -0.33
SYNE4-203ENST00000397428 GAREM2Q75VX8 874 aa12.97□□□□□ -0.33
SYNE4-203ENST00000397428 USP37Q86T82 979 aa12.97□□□□□ -0.33
SYNE4-203ENST00000397428 ATAD1Q8NBU5 361 aa12.97□□□□□ -0.33
SYNE4-203ENST00000397428 CSGALNACT1Q8TDX6 532 aa12.97□□□□□ -0.33
SYNE4-203ENST00000397428 PGLYRP2Q96PD5 576 aa12.97□□□□□ -0.33
SYNE4-203ENST00000397428 PLIN2Q99541 437 aa12.97□□□□□ -0.33
SYNE4-203ENST00000397428 RTKNQ9BST9 563 aa12.97□□□□□ -0.33
SYNE4-203ENST00000397428 OBP2AQ9NY56 170 aa12.97□□□□□ -0.33
SYNE4-203ENST00000397428 TBX20Q9UMR3 447 aa12.97□□□□□ -0.33
SYNE4-203ENST00000397428 CEP250Q9BV73 2442 aa12.96□□□□□ -0.33
SYNE4-203ENST00000397428 MYBPHLA2RUH7 354 aa12.96□□□□□ -0.33
SYNE4-203ENST00000397428 K7ESF4 209 aa12.96□□□□□ -0.33
SYNE4-203ENST00000397428 PIRO00625 290 aa12.96□□□□□ -0.33
SYNE4-203ENST00000397428 OGTO15294 1046 aa12.96□□□□□ -0.33
SYNE4-203ENST00000397428 SLC26A4O43511 780 aa12.96□□□□□ -0.33
SYNE4-203ENST00000397428 XPOTO43592 962 aaKnown RBP12.96□□□□□ -0.33
SYNE4-203ENST00000397428 LRP3O75074 770 aa12.96□□□□□ -0.33
SYNE4-203ENST00000397428 FGF19O95750 216 aa12.96□□□□□ -0.33
SYNE4-203ENST00000397428 CYP11A1P05108 521 aa12.96□□□□□ -0.33
SYNE4-203ENST00000397428 NEFLP07196 543 aa12.96□□□□□ -0.33
SYNE4-203ENST00000397428 RETP07949 1114 aa12.96□□□□□ -0.33
SYNE4-203ENST00000397428 HOXA6P31267 233 aa12.96□□□□□ -0.33
SYNE4-203ENST00000397428 SPEM2Q0P670 501 aa12.96□□□□□ -0.33
SYNE4-203ENST00000397428 ZRSR1Q15695 479 aaKnown RBP12.96□□□□□ -0.33
SYNE4-203ENST00000397428 TMEM119Q4V9L6 283 aa12.96□□□□□ -0.33
SYNE4-203ENST00000397428 DGKKQ5KSL6 1271 aa12.96□□□□□ -0.33
SYNE4-203ENST00000397428 OVOS1Q6IE37 1185 aa12.96□□□□□ -0.33
SYNE4-203ENST00000397428 RALGPS2Q86X27 583 aaPredicted RBP12.96□□□□□ -0.33
SYNE4-203ENST00000397428 GPIHBP1Q8IV16 184 aa12.96□□□□□ -0.33
SYNE4-203ENST00000397428 CD302Q8IX05 232 aa12.96□□□□□ -0.33
SYNE4-203ENST00000397428 YAF2Q8IY57 180 aa12.96□□□□□ -0.33
SYNE4-203ENST00000397428 PSMG2Q969U7 264 aa12.96□□□□□ -0.33
SYNE4-203ENST00000397428 GMEB2Q9UKD1 530 aa12.96□□□□□ -0.33
SYNE4-203ENST00000397428 CPSF3Q9UKF6 684 aaKnown RBP12.96□□□□□ -0.33
SYNE4-203ENST00000397428 ODF2LQ9ULJ1 636 aa12.96□□□□□ -0.33
SYNE4-203ENST00000397428 MYH11P35749 1972 aa12.95□□□□□ -0.34
SYNE4-203ENST00000397428 ANO9A1A5B4 782 aa12.95□□□□□ -0.34
SYNE4-203ENST00000397428 MTMR11A4FU01 709 aa12.95□□□□□ -0.34
SYNE4-203ENST00000397428 VWA3AA6NCI4 1184 aa12.95□□□□□ -0.34
SYNE4-203ENST00000397428 SPECC1L-ADORA2AF8WAN1 911 aa12.95□□□□□ -0.34
SYNE4-203ENST00000397428 PPEF2O14830 753 aa12.95□□□□□ -0.34
SYNE4-203ENST00000397428 MATR3P43243 847 aaKnown RBP eCLIP12.95□□□□□ -0.34
SYNE4-203ENST00000397428 GUCY2FP51841 1108 aa12.95□□□□□ -0.34
SYNE4-203ENST00000397428 KPNA1P52294 538 aaPredicted RBP12.95□□□□□ -0.34
SYNE4-203ENST00000397428 ZNF131P52739 623 aa12.95□□□□□ -0.34
SYNE4-203ENST00000397428 PPP2R3AQ06190 1150 aa12.95□□□□□ -0.34
SYNE4-203ENST00000397428 DMWDQ09019 674 aa12.95□□□□□ -0.34
SYNE4-203ENST00000397428 ARHGAP29Q52LW3 1261 aa12.95□□□□□ -0.34
SYNE4-203ENST00000397428 STXBP5Q5T5C0 1151 aa12.95□□□□□ -0.34
SYNE4-203ENST00000397428 ARMCX5Q6P1M9 558 aa12.95□□□□□ -0.34
SYNE4-203ENST00000397428 SENP8Q96LD8 212 aa12.95□□□□□ -0.34
SYNE4-203ENST00000397428 TMEM209Q96SK2 561 aa12.95□□□□□ -0.34
SYNE4-203ENST00000397428 SLITRK6Q9H5Y7 841 aa12.95□□□□□ -0.34
SYNE4-203ENST00000397428 RPF1Q9H9Y2 349 aaKnown RBP12.95□□□□□ -0.34
SYNE4-203ENST00000397428 CDV3Q9UKY7 258 aaKnown RBP12.95□□□□□ -0.34
SYNE4-203ENST00000397428 RAB23Q9ULC3 237 aa12.95□□□□□ -0.34
SYNE4-203ENST00000397428 USP18Q9UMW8 372 aa12.95□□□□□ -0.34
SYNE4-203ENST00000397428 DERAQ9Y315 318 aa12.95□□□□□ -0.34
SYNE4-203ENST00000397428 DNAH14Q0VDD8 3507 aa12.94□□□□□ -0.34
SYNE4-203ENST00000397428 DCDC2BA2VCK2 349 aa12.94□□□□□ -0.34
SYNE4-203ENST00000397428 SLC38A8A6NNN8 435 aa12.94□□□□□ -0.34
SYNE4-203ENST00000397428 CHURC1-FNTBB4DL54 471 aa12.94□□□□□ -0.34
SYNE4-203ENST00000397428 CTHP32929 405 aa12.94□□□□□ -0.34
SYNE4-203ENST00000397428 SOX9P48436 509 aa12.94□□□□□ -0.34
SYNE4-203ENST00000397428 FNTBP49356 437 aa12.94□□□□□ -0.34
SYNE4-203ENST00000397428 TUFMP49411 452 aaKnown RBP12.94□□□□□ -0.34
SYNE4-203ENST00000397428 LIG4P49917 911 aa12.94□□□□□ -0.34
SYNE4-203ENST00000397428 GTF2BQ00403 316 aa12.94□□□□□ -0.34
SYNE4-203ENST00000397428 POU5F1Q01860 360 aaKnown RBP12.94□□□□□ -0.34
SYNE4-203ENST00000397428 CACNB1Q02641 598 aaPredicted RBP12.94□□□□□ -0.34
SYNE4-203ENST00000397428 SIM2Q14190 667 aaPredicted RBP12.94□□□□□ -0.34
SYNE4-203ENST00000397428 LRRC32Q14392 662 aa12.94□□□□□ -0.34
SYNE4-203ENST00000397428 CSRP2Q16527 193 aa12.94□□□□□ -0.34
SYNE4-203ENST00000397428 LPAL2Q16609 132 aa12.94□□□□□ -0.34
SYNE4-203ENST00000397428 GPR158Q5T848 1215 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms