RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 LLGL2Q6P1M3 1020 aa9.69□□□□□ -0.86
CAPN3-206ENST00000397163 DEFB132Q7Z7B7 95 aa9.69□□□□□ -0.86
CAPN3-206ENST00000397163 MTDHQ86UE4 582 aaKnown RBP9.69□□□□□ -0.86
CAPN3-206ENST00000397163 CBWD2Q8IUF1 395 aa9.69□□□□□ -0.86
CAPN3-206ENST00000397163 ZCCHC9Q8N567 271 aaKnown RBP9.69□□□□□ -0.86
CAPN3-206ENST00000397163 RBBP8NLQ8NC74 664 aaPredicted RBP9.69□□□□□ -0.86
CAPN3-206ENST00000397163 NRG4Q8WWG1 115 aa9.69□□□□□ -0.86
CAPN3-206ENST00000397163 SCG3Q8WXD2 468 aaKnown RBP9.69□□□□□ -0.86
CAPN3-206ENST00000397163 CPA5Q8WXQ8 436 aa9.69□□□□□ -0.86
CAPN3-206ENST00000397163 DDX27Q96GQ7 796 aaKnown RBP9.69□□□□□ -0.86
CAPN3-206ENST00000397163 CAMKK2Q96RR4 588 aa9.69□□□□□ -0.86
CAPN3-206ENST00000397163 SH2D3AQ9BRG2 576 aa9.69□□□□□ -0.86
CAPN3-206ENST00000397163 TEKT3Q9BXF9 490 aa9.69□□□□□ -0.86
CAPN3-206ENST00000397163 DCLRE1BQ9H816 532 aa9.69□□□□□ -0.86
CAPN3-206ENST00000397163 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.69□□□□□ -0.86
CAPN3-206ENST00000397163 STOML1Q9UBI4 398 aa9.69□□□□□ -0.86
CAPN3-206ENST00000397163 DCTN4Q9UJW0 460 aa9.69□□□□□ -0.86
CAPN3-206ENST00000397163 GRID1Q9ULK0 1009 aa9.69□□□□□ -0.86
CAPN3-206ENST00000397163 NEU2Q9Y3R4 380 aa9.69□□□□□ -0.86
CAPN3-206ENST00000397163 PRPF4O43172 522 aaKnown RBP eCLIP9.69□□□□□ -0.86
CAPN3-206ENST00000397163 KRT36O76013 467 aa9.69□□□□□ -0.86
CAPN3-206ENST00000397163 LMNAP02545 664 aaKnown RBP9.69□□□□□ -0.86
CAPN3-206ENST00000397163 CYP1A1P04798 512 aaPredicted RBP9.69□□□□□ -0.86
CAPN3-206ENST00000397163 POLR2MP0CAP2 368 aa9.69□□□□□ -0.86
CAPN3-206ENST00000397163 SLC1A1P43005 524 aa9.69□□□□□ -0.86
CAPN3-206ENST00000397163 INHBCP55103 352 aa9.69□□□□□ -0.86
CAPN3-206ENST00000397163 DOK7Q18PE1 504 aa9.69□□□□□ -0.86
CAPN3-206ENST00000397163 SGSM1Q2NKQ1 1148 aa9.69□□□□□ -0.86
CAPN3-206ENST00000397163 KRT39Q6A163 491 aa9.69□□□□□ -0.86
CAPN3-206ENST00000397163 ISLR2Q6UXK2 745 aa9.69□□□□□ -0.86
CAPN3-206ENST00000397163 OTOAQ7RTW8 1153 aa9.69□□□□□ -0.86
CAPN3-206ENST00000397163 OPTNQ96CV9 577 aa9.69□□□□□ -0.86
CAPN3-206ENST00000397163 OSBPL8Q9BZF1 889 aa9.69□□□□□ -0.86
CAPN3-206ENST00000397163 USP20Q9Y2K6 914 aa9.69□□□□□ -0.86
CAPN3-206ENST00000397163 TAF1LQ8IZX4 1826 aa9.68□□□□□ -0.86
CAPN3-206ENST00000397163 DDTLA6NHG4 134 aaPredicted RBP9.68□□□□□ -0.86
CAPN3-206ENST00000397163 G3V3G9 751 aa9.68□□□□□ -0.86
CAPN3-206ENST00000397163 ABLIM1O14639 778 aa9.68□□□□□ -0.86
CAPN3-206ENST00000397163 CD58P19256 250 aa9.68□□□□□ -0.86
CAPN3-206ENST00000397163 USP46P62068 366 aa9.68□□□□□ -0.86
CAPN3-206ENST00000397163 ALCAMQ13740 583 aa9.68□□□□□ -0.86
CAPN3-206ENST00000397163 SLC45A4Q5BKX6 768 aa9.68□□□□□ -0.86
CAPN3-206ENST00000397163 DCAF8Q5TAQ9 597 aa9.68□□□□□ -0.86
CAPN3-206ENST00000397163 KAZNQ674X7 775 aa9.68□□□□□ -0.86
CAPN3-206ENST00000397163 CCDC174Q6PII3 467 aa9.68□□□□□ -0.86
CAPN3-206ENST00000397163 LVRNQ6Q4G3 990 aa9.68□□□□□ -0.86
CAPN3-206ENST00000397163 RGS9BPQ6ZS82 235 aa9.68□□□□□ -0.86
CAPN3-206ENST00000397163 TMEM179Q6ZVK1 233 aa9.68□□□□□ -0.86
CAPN3-206ENST00000397163 HAUS6Q7Z4H7 955 aa9.68□□□□□ -0.86
CAPN3-206ENST00000397163 RELL1Q8IUW5 271 aa9.68□□□□□ -0.86
CAPN3-206ENST00000397163 HELQQ8TDG4 1101 aa9.68□□□□□ -0.86
CAPN3-206ENST00000397163 TAS1R2Q8TE23 839 aa9.68□□□□□ -0.86
CAPN3-206ENST00000397163 ZNF333Q96JL9 665 aa9.68□□□□□ -0.86
CAPN3-206ENST00000397163 ZC3H12CQ9C0D7 883 aaKnown RBP9.68□□□□□ -0.86
CAPN3-206ENST00000397163 COA1Q9GZY4 146 aa9.68□□□□□ -0.86
CAPN3-206ENST00000397163 TOPORSQ9NS56 1045 aaPredicted RBP9.68□□□□□ -0.86
CAPN3-206ENST00000397163 SENP1Q9P0U3 644 aa9.68□□□□□ -0.86
CAPN3-206ENST00000397163 BLOC1S6Q9UL45 172 aa9.68□□□□□ -0.86
CAPN3-206ENST00000397163 ZBTB21Q9ULJ3 1066 aa9.68□□□□□ -0.86
CAPN3-206ENST00000397163 PRR12Q9ULL5 1215 aa9.68□□□□□ -0.86
CAPN3-206ENST00000397163 SRCAPQ6ZRS2 3230 aa9.68□□□□□ -0.86
CAPN3-206ENST00000397163 PIK3CDO00329 1044 aa9.68□□□□□ -0.86
CAPN3-206ENST00000397163 SLC16A4O15374 487 aa9.68□□□□□ -0.86
CAPN3-206ENST00000397163 TROVE2P10155 538 aaKnown RBP eCLIP9.68□□□□□ -0.86
CAPN3-206ENST00000397163 MUTP22033 750 aa9.68□□□□□ -0.86
CAPN3-206ENST00000397163 GCAP28676 217 aa9.68□□□□□ -0.86
CAPN3-206ENST00000397163 FASTKD3Q14CZ7 662 aaKnown RBP9.68□□□□□ -0.86
CAPN3-206ENST00000397163 SNRNP35Q16560 246 aaKnown RBP9.68□□□□□ -0.86
CAPN3-206ENST00000397163 ABCB5Q2M3G0 1257 aa9.68□□□□□ -0.86
CAPN3-206ENST00000397163 CNPY1Q3B7I2 92 aa9.68□□□□□ -0.86
CAPN3-206ENST00000397163 ACBD5Q5T8D3 534 aaPredicted RBP9.68□□□□□ -0.86
CAPN3-206ENST00000397163 SNX30Q5VWJ9 437 aa9.68□□□□□ -0.86
CAPN3-206ENST00000397163 MROH7Q68CQ1 1323 aa9.68□□□□□ -0.86
CAPN3-206ENST00000397163 MCOLN2Q8IZK6 566 aa9.68□□□□□ -0.86
CAPN3-206ENST00000397163 DDX1Q92499 740 aaKnown RBP9.68□□□□□ -0.86
CAPN3-206ENST00000397163 ZNF75CPQ92670 426 aaPredicted RBP9.68□□□□□ -0.86
CAPN3-206ENST00000397163 FAM136AQ96C01 138 aa9.68□□□□□ -0.86
CAPN3-206ENST00000397163 IFT43Q96FT9 208 aa9.68□□□□□ -0.86
CAPN3-206ENST00000397163 GMCL1Q96IK5 515 aa9.68□□□□□ -0.86
CAPN3-206ENST00000397163 TTC25Q96NG3 672 aa9.68□□□□□ -0.86
CAPN3-206ENST00000397163 FOXP3Q9BZS1 431 aa9.68□□□□□ -0.86
CAPN3-206ENST00000397163 ETNK2Q9NVF9 386 aa9.68□□□□□ -0.86
CAPN3-206ENST00000397163 PI4KBQ9UBF8 816 aa9.68□□□□□ -0.86
CAPN3-206ENST00000397163 ZNF148Q9UQR1 794 aa9.68□□□□□ -0.86
CAPN3-206ENST00000397163 A0A1W2PPM1 405 aa9.67□□□□□ -0.86
CAPN3-206ENST00000397163 IPO5O00410 1097 aaKnown RBP9.67□□□□□ -0.86
CAPN3-206ENST00000397163 ZSCAN5DPP0CG00 497 aa9.67□□□□□ -0.86
CAPN3-206ENST00000397163 IMPDH2P12268 514 aa9.67□□□□□ -0.86
CAPN3-206ENST00000397163 VHLP40337 213 aa9.67□□□□□ -0.86
CAPN3-206ENST00000397163 NEK3P51956 506 aa9.67□□□□□ -0.86
CAPN3-206ENST00000397163 OVGP1Q12889 678 aa9.67□□□□□ -0.86
CAPN3-206ENST00000397163 CMPK2Q5EBM0 449 aa9.67□□□□□ -0.86
CAPN3-206ENST00000397163 DSTYKQ6XUX3 929 aa9.67□□□□□ -0.86
CAPN3-206ENST00000397163 C4orf50Q6ZRC1 276 aa9.67□□□□□ -0.86
CAPN3-206ENST00000397163 MIER3Q7Z3K6 550 aa9.67□□□□□ -0.86
CAPN3-206ENST00000397163 RHOT1Q8IXI2 618 aa9.67□□□□□ -0.86
CAPN3-206ENST00000397163 C12orf56Q8IXR9 622 aa9.67□□□□□ -0.86
CAPN3-206ENST00000397163 FAM81BQ96LP2 452 aa9.67□□□□□ -0.86
CAPN3-206ENST00000397163 KLHL11Q9NVR0 708 aa9.67□□□□□ -0.86
CAPN3-206ENST00000397163 A0A0G2JND7 137 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms