RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 CXCL8P10145 99 aa14.26□□□□□ -0.13
SEC13-209ENST00000397117 CASP14P31944 242 aa14.26□□□□□ -0.13
SEC13-209ENST00000397117 PPM1AP35813 382 aa14.26□□□□□ -0.13
SEC13-209ENST00000397117 GRM5P41594 1212 aa14.26□□□□□ -0.13
SEC13-209ENST00000397117 AP3M2P53677 418 aa14.26□□□□□ -0.13
SEC13-209ENST00000397117 YARSP54577 528 aaKnown RBP14.26□□□□□ -0.13
SEC13-209ENST00000397117 CLDN10P78369 228 aa14.26□□□□□ -0.13
SEC13-209ENST00000397117 KRT17Q04695 432 aa14.26□□□□□ -0.13
SEC13-209ENST00000397117 FIGNQ5HY92 759 aa14.26□□□□□ -0.13
SEC13-209ENST00000397117 ECHDC2Q86YB7 292 aa14.26□□□□□ -0.13
SEC13-209ENST00000397117 WDR49Q8IV35 697 aa14.26□□□□□ -0.13
SEC13-209ENST00000397117 MRPL43Q8N983 215 aaKnown RBP14.26□□□□□ -0.13
SEC13-209ENST00000397117 ADAM7Q9H2U9 754 aa14.26□□□□□ -0.13
SEC13-209ENST00000397117 TOPORSQ9NS56 1045 aaPredicted RBP14.26□□□□□ -0.13
SEC13-209ENST00000397117 LUC7L2Q9Y383 392 aaKnown RBP14.26□□□□□ -0.13
SEC13-209ENST00000397117 NR2E1Q9Y466 385 aa14.26□□□□□ -0.13
SEC13-209ENST00000397117 C2orf71A6NGG8 1288 aa14.25□□□□□ -0.13
SEC13-209ENST00000397117 NRDCO43847 1150 aa14.25□□□□□ -0.13
SEC13-209ENST00000397117 SLC9A1P19634 815 aa14.25□□□□□ -0.13
SEC13-209ENST00000397117 SP100P23497 879 aaPredicted RBP14.25□□□□□ -0.13
SEC13-209ENST00000397117 PON1P27169 355 aa14.25□□□□□ -0.13
SEC13-209ENST00000397117 PBX3P40426 434 aa14.25□□□□□ -0.13
SEC13-209ENST00000397117 ADKP55263 362 aaKnown RBP14.25□□□□□ -0.13
SEC13-209ENST00000397117 BIRC3Q13489 604 aa14.25□□□□□ -0.13
SEC13-209ENST00000397117 TSR1Q2NL82 804 aaKnown RBP14.25□□□□□ -0.13
SEC13-209ENST00000397117 LMBRD2Q68DH5 695 aaPredicted RBP14.25□□□□□ -0.13
SEC13-209ENST00000397117 CACNA2D4Q7Z3S7 1137 aa14.25□□□□□ -0.13
SEC13-209ENST00000397117 TMC7Q7Z402 723 aa14.25□□□□□ -0.13
SEC13-209ENST00000397117 UBALD2Q8IYN6 164 aa14.25□□□□□ -0.13
SEC13-209ENST00000397117 SLC39A11Q8N1S5 342 aa14.25□□□□□ -0.13
SEC13-209ENST00000397117 LRRC43Q8N309 656 aa14.25□□□□□ -0.13
SEC13-209ENST00000397117 CASP10Q92851 521 aa14.25□□□□□ -0.13
SEC13-209ENST00000397117 INTS2Q9H0H0 1204 aaKnown RBP14.25□□□□□ -0.13
SEC13-209ENST00000397117 POMKQ9H5K3 350 aa14.25□□□□□ -0.13
SEC13-209ENST00000397117 PLCB1Q9NQ66 1216 aa14.25□□□□□ -0.13
SEC13-209ENST00000397117 CAPN11Q9UMQ6 739 aa14.25□□□□□ -0.13
SEC13-209ENST00000397117 SORCS3Q9UPU3 1222 aa14.25□□□□□ -0.13
SEC13-209ENST00000397117 A0A1W2PQJ5 194 aa14.24□□□□□ -0.13
SEC13-209ENST00000397117 TTC26A0AVF1 554 aa14.24□□□□□ -0.13
SEC13-209ENST00000397117 C2CD4DB7Z1M9 353 aa14.24□□□□□ -0.13
SEC13-209ENST00000397117 MFAP3LO75121 409 aa14.24□□□□□ -0.13
SEC13-209ENST00000397117 CLASP2O75122 1294 aaKnown RBP14.24□□□□□ -0.13
SEC13-209ENST00000397117 PHACTR2O75167 634 aa14.24□□□□□ -0.13
SEC13-209ENST00000397117 WNT7BP56706 349 aa14.24□□□□□ -0.13
SEC13-209ENST00000397117 TFAMQ00059 246 aaKnown RBP14.24□□□□□ -0.13
SEC13-209ENST00000397117 ITIH3Q06033 890 aa14.24□□□□□ -0.13
SEC13-209ENST00000397117 DUOXA2Q1HG44 320 aa14.24□□□□□ -0.13
SEC13-209ENST00000397117 CLLU1OSQ5K130 101 aa14.24□□□□□ -0.13
SEC13-209ENST00000397117 SV2AQ7L0J3 742 aa14.24□□□□□ -0.13
SEC13-209ENST00000397117 HACE1Q8IYU2 909 aa14.24□□□□□ -0.13
SEC13-209ENST00000397117 EHBP1Q8NDI1 1231 aa14.24□□□□□ -0.13
SEC13-209ENST00000397117 FBXL13Q8NEE6 735 aa14.24□□□□□ -0.13
SEC13-209ENST00000397117 NECTIN4Q96NY8 510 aa14.24□□□□□ -0.13
SEC13-209ENST00000397117 SNTG2Q9NY99 539 aa14.24□□□□□ -0.13
SEC13-209ENST00000397117 HCFC2Q9Y5Z7 792 aa14.24□□□□□ -0.13
SEC13-209ENST00000397117 LACTBL1A8MY62 500 aa14.23□□□□□ -0.13
SEC13-209ENST00000397117 TNNC2P02585 160 aa14.23□□□□□ -0.13
SEC13-209ENST00000397117 TMEM191BP0C7N4 346 aa14.23□□□□□ -0.13
SEC13-209ENST00000397117 KRT9P35527 623 aa14.23□□□□□ -0.13
SEC13-209ENST00000397117 GOLGA8FQ08AF8 430 aa14.23□□□□□ -0.13
SEC13-209ENST00000397117 GOLGA8DPQ0D2H9 430 aa14.23□□□□□ -0.13
SEC13-209ENST00000397117 SMC1AQ14683 1233 aaKnown RBP14.23□□□□□ -0.13
SEC13-209ENST00000397117 ARID5BQ14865 1188 aa14.23□□□□□ -0.13
SEC13-209ENST00000397117 UBXN11Q5T124 520 aa14.23□□□□□ -0.13
SEC13-209ENST00000397117 CES5AQ6NT32 575 aa14.23□□□□□ -0.13
SEC13-209ENST00000397117 TRIM65Q6PJ69 517 aa14.23□□□□□ -0.13
SEC13-209ENST00000397117 ZNF598Q86UK7 904 aaKnown RBP14.23□□□□□ -0.13
SEC13-209ENST00000397117 LRRC8AQ8IWT6 810 aa14.23□□□□□ -0.13
SEC13-209ENST00000397117 CD302Q8IX05 232 aa14.23□□□□□ -0.13
SEC13-209ENST00000397117 TMEM105Q8N8V8 129 aa14.23□□□□□ -0.13
SEC13-209ENST00000397117 CACTINQ8WUQ7 758 aaKnown RBP14.23□□□□□ -0.13
SEC13-209ENST00000397117 ZNF516Q92618 1163 aa14.23□□□□□ -0.13
SEC13-209ENST00000397117 ANKRD36BP1Q96IX9 119 aa14.23□□□□□ -0.13
SEC13-209ENST00000397117 APOL6Q9BWW8 343 aa14.23□□□□□ -0.13
SEC13-209ENST00000397117 EDEM3Q9BZQ6 932 aa14.23□□□□□ -0.13
SEC13-209ENST00000397117 TTYH3Q9C0H2 523 aa14.23□□□□□ -0.13
SEC13-209ENST00000397117 NXF3Q9H4D5 531 aaKnown RBP14.23□□□□□ -0.13
SEC13-209ENST00000397117 ASB7Q9H672 318 aa14.23□□□□□ -0.13
SEC13-209ENST00000397117 PLEKHA5Q9HAU0 1116 aa14.23□□□□□ -0.13
SEC13-209ENST00000397117 CEP72Q9P209 647 aa14.23□□□□□ -0.13
SEC13-209ENST00000397117 HES2Q9Y543 173 aa14.23□□□□□ -0.13
SEC13-209ENST00000397117 IPPQ9Y573 584 aa14.23□□□□□ -0.13
SEC13-209ENST00000397117 PCDHB2Q9Y5E7 798 aa14.23□□□□□ -0.13
SEC13-209ENST00000397117 A0A0U1RQF3 1178 aa14.23□□□□□ -0.13
SEC13-209ENST00000397117 CLSTN1O94985 981 aa14.23□□□□□ -0.13
SEC13-209ENST00000397117 EOMESO95936 686 aa14.23□□□□□ -0.13
SEC13-209ENST00000397117 C4BPAP04003 597 aaKnown RBP14.23□□□□□ -0.13
SEC13-209ENST00000397117 PIK3CAP42336 1068 aa14.23□□□□□ -0.13
SEC13-209ENST00000397117 MTHFRP42898 656 aa14.23□□□□□ -0.13
SEC13-209ENST00000397117 POLR2FP61218 127 aaKnown RBP14.23□□□□□ -0.13
SEC13-209ENST00000397117 ZBED6P86452 979 aa14.23□□□□□ -0.13
SEC13-209ENST00000397117 MTMR3Q13615 1198 aa14.23□□□□□ -0.13
SEC13-209ENST00000397117 SLC10A6Q3KNW5 377 aa14.23□□□□□ -0.13
SEC13-209ENST00000397117 ZACNQ401N2 412 aa14.23□□□□□ -0.13
SEC13-209ENST00000397117 KLHDC7AQ5VTJ3 777 aa14.23□□□□□ -0.13
SEC13-209ENST00000397117 TDRD10Q5VZ19 366 aaKnown RBP14.23□□□□□ -0.13
SEC13-209ENST00000397117 ASCL5Q7RTU5 278 aa14.23□□□□□ -0.13
SEC13-209ENST00000397117 ABI1Q8IZP0 508 aa14.23□□□□□ -0.13
SEC13-209ENST00000397117 TC2NQ8N9U0 490 aa14.23□□□□□ -0.13
SEC13-209ENST00000397117 OR5B17Q8NGF7 314 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms