RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 HPSEQ9Y251 543 aa15.06■□□□□ 0
SEC13-204ENST00000397099 ZDHHC9Q9Y397 364 aa15.06■□□□□ 0
SEC13-204ENST00000397099 SCN1AP35498 2009 aa15.05■□□□□ 0
SEC13-204ENST00000397099 KPNA7A9QM74 516 aa15.05■□□□□ -0
SEC13-204ENST00000397099 CCL16O15467 120 aa15.05■□□□□ -0
SEC13-204ENST00000397099 PFKFB1P16118 471 aa15.05■□□□□ -0
SEC13-204ENST00000397099 SYKP43405 635 aa15.05■□□□□ -0
SEC13-204ENST00000397099 AFMP43652 599 aa15.05■□□□□ -0
SEC13-204ENST00000397099 ARPP19P56211 112 aa15.05■□□□□ -0
SEC13-204ENST00000397099 ADCY1Q08828 1119 aa15.05■□□□□ -0
SEC13-204ENST00000397099 GET4Q7L5D6 327 aaPredicted RBP15.05■□□□□ -0
SEC13-204ENST00000397099 C12orf56Q8IXR9 622 aa15.05■□□□□ -0
SEC13-204ENST00000397099 C2orf15Q8WU43 125 aaKnown RBP15.05■□□□□ -0
SEC13-204ENST00000397099 TMEM174Q8WUU8 243 aa15.05■□□□□ -0
SEC13-204ENST00000397099 SAAL1Q96ER3 474 aa15.05■□□□□ -0
SEC13-204ENST00000397099 ANKRD36BP1Q96IX9 119 aa15.05■□□□□ -0
SEC13-204ENST00000397099 CBWD1Q9BRT8 395 aa15.05■□□□□ -0
SEC13-204ENST00000397099 FGFBP2Q9BYJ0 223 aa15.05■□□□□ -0
SEC13-204ENST00000397099 EXOC1Q9NV70 894 aa15.05■□□□□ -0
SEC13-204ENST00000397099 CDH7Q9ULB5 785 aa15.05■□□□□ -0
SEC13-204ENST00000397099 INSL5Q9Y5Q6 135 aa15.05■□□□□ -0
SEC13-204ENST00000397099 ACTN4O43707 911 aaKnown RBP15.04■□□□□ -0
SEC13-204ENST00000397099 TMEM191BP0C7N4 346 aa15.04■□□□□ -0
SEC13-204ENST00000397099 GUCY2FP51841 1108 aa15.04■□□□□ -0
SEC13-204ENST00000397099 RBP5P82980 135 aa15.04■□□□□ -0
SEC13-204ENST00000397099 TFAMQ00059 246 aaKnown RBP15.04■□□□□ -0
SEC13-204ENST00000397099 MYO1EQ12965 1108 aa15.04■□□□□ -0
SEC13-204ENST00000397099 KNOP1Q1ED39 458 aaKnown RBP15.04■□□□□ -0
SEC13-204ENST00000397099 DUOXA2Q1HG44 320 aa15.04■□□□□ -0
SEC13-204ENST00000397099 CYP4A22Q5TCH4 519 aa15.04■□□□□ -0
SEC13-204ENST00000397099 EFCAB13Q8IY85 973 aa15.04■□□□□ -0
SEC13-204ENST00000397099 TMEM86AQ8N2M4 240 aa15.04■□□□□ -0
SEC13-204ENST00000397099 XXYLT1Q8NBI6 393 aa15.04■□□□□ -0
SEC13-204ENST00000397099 FLCNQ8NFG4 579 aa15.04■□□□□ -0
SEC13-204ENST00000397099 SCFD1Q8WVM8 642 aa15.04■□□□□ -0
SEC13-204ENST00000397099 PAGE5Q96GU1 130 aa15.04■□□□□ -0
SEC13-204ENST00000397099 ZNF512Q96ME7 567 aaPredicted RBP15.04■□□□□ -0
SEC13-204ENST00000397099 MYADMQ96S97 322 aa15.04■□□□□ -0
SEC13-204ENST00000397099 AGPAT3Q9NRZ7 376 aa15.04■□□□□ -0
SEC13-204ENST00000397099 HSPBP1Q9NZL4 362 aa15.04■□□□□ -0
SEC13-204ENST00000397099 SERTAD1Q9UHV2 236 aa15.04■□□□□ -0
SEC13-204ENST00000397099 MRPS23Q9Y3D9 190 aaKnown RBP15.04■□□□□ -0
SEC13-204ENST00000397099 ASB3Q9Y575 518 aa15.04■□□□□ -0
SEC13-204ENST00000397099 ZDBF2Q9HCK1 2354 aa15.04■□□□□ -0
SEC13-204ENST00000397099 ZNF318Q5VUA4 2279 aa15.04■□□□□ -0
SEC13-204ENST00000397099 TSC2P49815 1807 aa15.03■□□□□ -0
SEC13-204ENST00000397099 A0A1B0GVL5 298 aa15.03■□□□□ -0
SEC13-204ENST00000397099 ANHXE9PGG2 379 aa15.03■□□□□ -0
SEC13-204ENST00000397099 CYB561D2O14569 222 aa15.03■□□□□ -0
SEC13-204ENST00000397099 HUS1O60921 280 aa15.03■□□□□ -0
SEC13-204ENST00000397099 N4BP1O75113 896 aaKnown RBP15.03■□□□□ -0
SEC13-204ENST00000397099 FGF19O95750 216 aa15.03■□□□□ -0
SEC13-204ENST00000397099 TNNC2P02585 160 aa15.03■□□□□ -0
SEC13-204ENST00000397099 SRFP11831 508 aa15.03■□□□□ -0
SEC13-204ENST00000397099 ALDH1A3P47895 512 aa15.03■□□□□ -0
SEC13-204ENST00000397099 TUFMP49411 452 aaKnown RBP15.03■□□□□ -0
SEC13-204ENST00000397099 TCF15Q12870 199 aa15.03■□□□□ -0
SEC13-204ENST00000397099 CUL4BQ13620 913 aa15.03■□□□□ -0
SEC13-204ENST00000397099 SNRNP35Q16560 246 aaKnown RBP15.03■□□□□ -0
SEC13-204ENST00000397099 DPH6Q7L8W6 267 aa15.03■□□□□ -0
SEC13-204ENST00000397099 WDR49Q8IV35 697 aa15.03■□□□□ -0
SEC13-204ENST00000397099 RSAD2Q8WXG1 361 aa15.03■□□□□ -0
SEC13-204ENST00000397099 FNBP1Q96RU3 617 aa15.03■□□□□ -0
SEC13-204ENST00000397099 BLZF1Q9H2G9 400 aa15.03■□□□□ -0
SEC13-204ENST00000397099 IKZF4Q9H2S9 585 aa15.03■□□□□ -0
SEC13-204ENST00000397099 PCIF1Q9H4Z3 704 aa15.03■□□□□ -0
SEC13-204ENST00000397099 GDAP2Q9NXN4 497 aa15.03■□□□□ -0
SEC13-204ENST00000397099 DNMT3BQ9UBC3 853 aaKnown RBP15.03■□□□□ -0
SEC13-204ENST00000397099 WNT16Q9UBV4 365 aa15.03■□□□□ -0
SEC13-204ENST00000397099 DOCK6Q96HP0 2047 aa15.02■□□□□ -0
SEC13-204ENST00000397099 STK25O00506 426 aa15.02■□□□□ -0
SEC13-204ENST00000397099 TGFB1I1O43294 461 aa15.02■□□□□ -0
SEC13-204ENST00000397099 ITGB3P05106 788 aa15.02■□□□□ -0
SEC13-204ENST00000397099 RHOP08100 348 aa15.02■□□□□ -0
SEC13-204ENST00000397099 RFX1P22670 979 aa15.02■□□□□ -0
SEC13-204ENST00000397099 HOXD13P35453 343 aa15.02■□□□□ -0
SEC13-204ENST00000397099 AP3M2P53677 418 aa15.02■□□□□ -0
SEC13-204ENST00000397099 EPHB3P54753 998 aa15.02■□□□□ -0
SEC13-204ENST00000397099 ASTLQ6HA08 431 aaPredicted RBP15.02■□□□□ -0
SEC13-204ENST00000397099 RNF19BQ6ZMZ0 732 aa15.02■□□□□ -0
SEC13-204ENST00000397099 PDZD4Q76G19 769 aaPredicted RBP15.02■□□□□ -0
SEC13-204ENST00000397099 ITIH5Q86UX2 942 aa15.02■□□□□ -0
SEC13-204ENST00000397099 DCP1BQ8IZD4 617 aaKnown RBP15.02■□□□□ -0
SEC13-204ENST00000397099 CSGALNACT2Q8N6G5 542 aa15.02■□□□□ -0
SEC13-204ENST00000397099 C1orf127Q8N9H9 656 aa15.02■□□□□ -0
SEC13-204ENST00000397099 NOC3LQ8WTT2 800 aaKnown RBP15.02■□□□□ -0
SEC13-204ENST00000397099 FGF13Q92913 245 aa15.02■□□□□ -0
SEC13-204ENST00000397099 HPS3Q969F9 1004 aa15.02■□□□□ -0
SEC13-204ENST00000397099 GPR88Q9GZN0 384 aa15.02■□□□□ -0
SEC13-204ENST00000397099 IRF2BPLQ9H1B7 796 aa15.02■□□□□ -0
SEC13-204ENST00000397099 PDE11AQ9HCR9 933 aa15.02■□□□□ -0
SEC13-204ENST00000397099 SLC39A2Q9NP94 309 aa15.02■□□□□ -0
SEC13-204ENST00000397099 FAM86C1Q9NVL1 165 aa15.02■□□□□ -0
SEC13-204ENST00000397099 INTS13Q9NVM9 706 aa15.02■□□□□ -0
SEC13-204ENST00000397099 AGAP1Q9UPQ3 857 aa15.02■□□□□ -0
SEC13-204ENST00000397099 TIMM13Q9Y5L4 95 aaPredicted RBP15.02■□□□□ -0
SEC13-204ENST00000397099 NOTCH4Q99466 2003 aa15.02□□□□□ -0.01
SEC13-204ENST00000397099 KMT2EQ8IZD2 1858 aa15.01□□□□□ -0.01
SEC13-204ENST00000397099 GOLGA8IPA6NC78 632 aa15.01□□□□□ -0.01
SEC13-204ENST00000397099 GOLGA6L4A6NEF3 574 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms