RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 SPEGQ15772 3267 aa9.23□□□□□ -0.93
SCFD1-202ENST00000396629 ARHGEF35A5YM69 484 aa9.22□□□□□ -0.93
SCFD1-202ENST00000396629 WNT7AO00755 349 aa9.22□□□□□ -0.93
SCFD1-202ENST00000396629 DPYSL4O14531 572 aa9.22□□□□□ -0.93
SCFD1-202ENST00000396629 OAZ2O95190 189 aa9.22□□□□□ -0.93
SCFD1-202ENST00000396629 SPINK2P20155 84 aa9.22□□□□□ -0.93
SCFD1-202ENST00000396629 KRT2P35908 639 aa9.22□□□□□ -0.93
SCFD1-202ENST00000396629 VASPP50552 380 aaPredicted RBP9.22□□□□□ -0.93
SCFD1-202ENST00000396629 EPHB3P54753 998 aa9.22□□□□□ -0.93
SCFD1-202ENST00000396629 TNK2Q07912 1038 aa9.22□□□□□ -0.93
SCFD1-202ENST00000396629 SCRN1Q12765 414 aa9.22□□□□□ -0.93
SCFD1-202ENST00000396629 ITPRIPL2Q3MIP1 535 aa9.22□□□□□ -0.93
SCFD1-202ENST00000396629 DAB2IPQ5VWQ8 1189 aa9.22□□□□□ -0.93
SCFD1-202ENST00000396629 FSTL4Q6MZW2 842 aa9.22□□□□□ -0.93
SCFD1-202ENST00000396629 SKAP1Q86WV1 359 aa9.22□□□□□ -0.93
SCFD1-202ENST00000396629 BPIFB1Q8TDL5 484 aa9.22□□□□□ -0.93
SCFD1-202ENST00000396629 IFT74Q96LB3 600 aa9.22□□□□□ -0.93
SCFD1-202ENST00000396629 CYP46A1Q9Y6A2 500 aa9.22□□□□□ -0.93
SCFD1-202ENST00000396629 LAMA1P25391 3075 aa9.22□□□□□ -0.93
SCFD1-202ENST00000396629 THADAQ6YHU6 1953 aa9.22□□□□□ -0.93
SCFD1-202ENST00000396629 BCLAF3A2AJT9 711 aaKnown RBP9.22□□□□□ -0.93
SCFD1-202ENST00000396629 K7ERI5 159 aa9.22□□□□□ -0.93
SCFD1-202ENST00000396629 M0QZQ0 153 aa9.22□□□□□ -0.93
SCFD1-202ENST00000396629 TRDMT1O14717 391 aaKnown RBP9.22□□□□□ -0.93
SCFD1-202ENST00000396629 MEFVO15553 781 aaPredicted RBP9.22□□□□□ -0.93
SCFD1-202ENST00000396629 NEMFO60524 1076 aa9.22□□□□□ -0.93
SCFD1-202ENST00000396629 RHOBTB1O94844 696 aa9.22□□□□□ -0.93
SCFD1-202ENST00000396629 FGF19O95750 216 aa9.22□□□□□ -0.93
SCFD1-202ENST00000396629 CAVIN2O95810 425 aa9.22□□□□□ -0.93
SCFD1-202ENST00000396629 TOP3BO95985 862 aaKnown RBP9.22□□□□□ -0.93
SCFD1-202ENST00000396629 CEACAM1P13688 526 aa9.22□□□□□ -0.93
SCFD1-202ENST00000396629 CSRP1P21291 193 aaKnown RBP9.22□□□□□ -0.93
SCFD1-202ENST00000396629 MARCKSP29966 332 aaPredicted RBP9.22□□□□□ -0.93
SCFD1-202ENST00000396629 MCM4P33991 863 aa9.22□□□□□ -0.93
SCFD1-202ENST00000396629 OSTNP61366 133 aa9.22□□□□□ -0.93
SCFD1-202ENST00000396629 PTPAQ15257 358 aa9.22□□□□□ -0.93
SCFD1-202ENST00000396629 GPR158Q5T848 1215 aa9.22□□□□□ -0.93
SCFD1-202ENST00000396629 SH3PXD2AQ5TCZ1 1133 aa9.22□□□□□ -0.93
SCFD1-202ENST00000396629 ACAP3Q96P50 834 aa9.22□□□□□ -0.93
SCFD1-202ENST00000396629 ANK1P16157 1881 aa9.21□□□□□ -0.93
SCFD1-202ENST00000396629 ABLIM1O14639 778 aa9.21□□□□□ -0.93
SCFD1-202ENST00000396629 MCF2P10911 925 aa9.21□□□□□ -0.93
SCFD1-202ENST00000396629 PROZP22891 400 aa9.21□□□□□ -0.93
SCFD1-202ENST00000396629 RPA1P27694 616 aa9.21□□□□□ -0.93
SCFD1-202ENST00000396629 ALDH1A3P47895 512 aa9.21□□□□□ -0.93
SCFD1-202ENST00000396629 MCM2P49736 904 aa9.21□□□□□ -0.93
SCFD1-202ENST00000396629 IRX6P78412 446 aaPredicted RBP9.21□□□□□ -0.93
SCFD1-202ENST00000396629 RING1Q06587 406 aa9.21□□□□□ -0.93
SCFD1-202ENST00000396629 GRSF1Q12849 480 aaKnown RBP eCLIP9.21□□□□□ -0.93
SCFD1-202ENST00000396629 DUSP4Q13115 394 aa9.21□□□□□ -0.93
SCFD1-202ENST00000396629 GPR17Q13304 367 aa9.21□□□□□ -0.93
SCFD1-202ENST00000396629 KARSQ15046 597 aaKnown RBP9.21□□□□□ -0.93
SCFD1-202ENST00000396629 ELF2Q15723 593 aa9.21□□□□□ -0.93
SCFD1-202ENST00000396629 ZNF568Q3ZCX4 644 aa9.21□□□□□ -0.93
SCFD1-202ENST00000396629 ARHGAP15Q53QZ3 475 aa9.21□□□□□ -0.93
SCFD1-202ENST00000396629 CENPPQ6IPU0 288 aa9.21□□□□□ -0.93
SCFD1-202ENST00000396629 DNAJB7Q7Z6W7 309 aaPredicted RBP9.21□□□□□ -0.93
SCFD1-202ENST00000396629 KIFAP3Q92845 792 aa9.21□□□□□ -0.93
SCFD1-202ENST00000396629 PSMG2Q969U7 264 aa9.21□□□□□ -0.93
SCFD1-202ENST00000396629 CHFRQ96EP1 664 aa9.21□□□□□ -0.93
SCFD1-202ENST00000396629 SCNM1Q9BWG6 230 aa9.21□□□□□ -0.93
SCFD1-202ENST00000396629 TM6SF1Q9BZW5 370 aa9.21□□□□□ -0.93
SCFD1-202ENST00000396629 TMEM60Q9H2L4 133 aa9.21□□□□□ -0.93
SCFD1-202ENST00000396629 ATXN3LQ9H3M9 355 aa9.21□□□□□ -0.93
SCFD1-202ENST00000396629 TASP1Q9H6P5 420 aa9.21□□□□□ -0.93
SCFD1-202ENST00000396629 TMEM134Q9H6X4 195 aa9.21□□□□□ -0.93
SCFD1-202ENST00000396629 POLD4Q9HCU8 107 aa9.21□□□□□ -0.93
SCFD1-202ENST00000396629 OBSL1O75147 1896 aa9.21□□□□□ -0.94
SCFD1-202ENST00000396629 PHLPP2Q6ZVD8 1323 aa9.21□□□□□ -0.94
SCFD1-202ENST00000396629 LNP1A1A4G5 178 aa9.21□□□□□ -0.94
SCFD1-202ENST00000396629 OR6C75A6NL08 312 aa9.21□□□□□ -0.94
SCFD1-202ENST00000396629 PRAMEF12O95522 483 aa9.21□□□□□ -0.94
SCFD1-202ENST00000396629 OR4Q2P0C623 313 aa9.21□□□□□ -0.94
SCFD1-202ENST00000396629 MUTP22033 750 aa9.21□□□□□ -0.94
SCFD1-202ENST00000396629 GABRR2P28476 465 aa9.21□□□□□ -0.94
SCFD1-202ENST00000396629 YWHAHQ04917 246 aaPredicted RBP9.21□□□□□ -0.94
SCFD1-202ENST00000396629 TAS1R3Q7RTX0 852 aa9.21□□□□□ -0.94
SCFD1-202ENST00000396629 PGLYRP2Q96PD5 576 aa9.21□□□□□ -0.94
SCFD1-202ENST00000396629 FAM83CQ9BQN1 747 aa9.21□□□□□ -0.94
SCFD1-202ENST00000396629 BRMS1Q9HCU9 246 aa9.21□□□□□ -0.94
SCFD1-202ENST00000396629 HPS4Q9NQG7 708 aa9.21□□□□□ -0.94
SCFD1-202ENST00000396629 GKN1Q9NS71 199 aa9.21□□□□□ -0.94
SCFD1-202ENST00000396629 THG1LQ9NWX6 298 aaKnown RBP9.21□□□□□ -0.94
SCFD1-202ENST00000396629 EBF1Q9UH73 591 aa9.21□□□□□ -0.94
SCFD1-202ENST00000396629 LHX6Q9UPM6 363 aa9.21□□□□□ -0.94
SCFD1-202ENST00000396629 TSC2P49815 1807 aa9.2□□□□□ -0.94
SCFD1-202ENST00000396629 TNRC6BQ9UPQ9 1833 aaKnown RBP9.2□□□□□ -0.94
SCFD1-202ENST00000396629 AKAP13Q12802 2813 aa9.2□□□□□ -0.94
SCFD1-202ENST00000396629 FASNP49327 2511 aaKnown RBP9.2□□□□□ -0.94
SCFD1-202ENST00000396629 ZFYVE26Q68DK2 2539 aa9.2□□□□□ -0.94
SCFD1-202ENST00000396629 PTPRDP23468 1912 aa9.2□□□□□ -0.94
SCFD1-202ENST00000396629 ADAMTS20P59510 1910 aa9.2□□□□□ -0.94
SCFD1-202ENST00000396629 CDX4O14627 284 aaPredicted RBP9.2□□□□□ -0.94
SCFD1-202ENST00000396629 RNF40O75150 1001 aa9.2□□□□□ -0.94
SCFD1-202ENST00000396629 CTDNEP1O95476 244 aa9.2□□□□□ -0.94
SCFD1-202ENST00000396629 EGFP01133 1207 aa9.2□□□□□ -0.94
SCFD1-202ENST00000396629 AARSP49588 968 aaKnown RBP eCLIP9.2□□□□□ -0.94
SCFD1-202ENST00000396629 CREB5Q02930 508 aa9.2□□□□□ -0.94
SCFD1-202ENST00000396629 RUNX3Q13761 415 aa9.2□□□□□ -0.94
SCFD1-202ENST00000396629 MYBPC2Q14324 1141 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms