RNA–Protein interactions for RNA: ENST00000396060.6

GTF2A2-202, Transcript of general transcription factor IIA subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A2, Length 1,582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A2-202ENST00000396060 POLIQ9UNA4 740 aa12.69□□□□□ -0.38
GTF2A2-202ENST00000396060 GIT1Q9Y2X7 761 aa12.69□□□□□ -0.38
GTF2A2-202ENST00000396060 FRMPD3Q5JV73 1810 aa12.68□□□□□ -0.38
GTF2A2-202ENST00000396060 DNM1LO00429 736 aa12.68□□□□□ -0.38
GTF2A2-202ENST00000396060 SKIP12755 728 aa12.68□□□□□ -0.38
GTF2A2-202ENST00000396060 ZSCAN20P17040 1043 aaPredicted RBP12.68□□□□□ -0.38
GTF2A2-202ENST00000396060 ATF7P17544 494 aaPredicted RBP12.68□□□□□ -0.38
GTF2A2-202ENST00000396060 AKAP5P24588 427 aa12.68□□□□□ -0.38
GTF2A2-202ENST00000396060 RAD23BP54727 409 aa12.68□□□□□ -0.38
GTF2A2-202ENST00000396060 C1QBPQ07021 282 aaKnown RBP12.68□□□□□ -0.38
GTF2A2-202ENST00000396060 C11orf63Q6NUN7 778 aa12.68□□□□□ -0.38
GTF2A2-202ENST00000396060 DNAAF5Q86Y56 855 aa12.68□□□□□ -0.38
GTF2A2-202ENST00000396060 CREG2Q8IUH2 290 aa12.68□□□□□ -0.38
GTF2A2-202ENST00000396060 MNS1Q8NEH6 495 aa12.68□□□□□ -0.38
GTF2A2-202ENST00000396060 CYFIP2Q96F07 1278 aa12.68□□□□□ -0.38
GTF2A2-202ENST00000396060 PPP1R10Q96QC0 940 aaKnown RBP12.68□□□□□ -0.38
GTF2A2-202ENST00000396060 OSBPL9Q96SU4 736 aa12.68□□□□□ -0.38
GTF2A2-202ENST00000396060 ZSWIM1Q9BR11 485 aa12.68□□□□□ -0.38
GTF2A2-202ENST00000396060 BEGAINQ9BUH8 593 aa12.68□□□□□ -0.38
GTF2A2-202ENST00000396060 STARD7Q9NQZ5 370 aa12.68□□□□□ -0.38
GTF2A2-202ENST00000396060 PARP2Q9UGN5 583 aa12.68□□□□□ -0.38
GTF2A2-202ENST00000396060 COG5Q9UP83 839 aa12.68□□□□□ -0.38
GTF2A2-202ENST00000396060 NOD1Q9Y239 953 aa12.68□□□□□ -0.38
GTF2A2-202ENST00000396060 A0A0U1RQF3 1178 aa12.67□□□□□ -0.38
GTF2A2-202ENST00000396060 KBTBD13C9JR72 458 aa12.67□□□□□ -0.38
GTF2A2-202ENST00000396060 INPPL1O15357 1258 aa12.67□□□□□ -0.38
GTF2A2-202ENST00000396060 TLR3O15455 904 aaKnown RBP12.67□□□□□ -0.38
GTF2A2-202ENST00000396060 THAP12O43422 761 aa12.67□□□□□ -0.38
GTF2A2-202ENST00000396060 MED7O43513 233 aa12.67□□□□□ -0.38
GTF2A2-202ENST00000396060 CAPN15O75808 1086 aa12.67□□□□□ -0.38
GTF2A2-202ENST00000396060 MYCNP04198 464 aaPredicted RBP12.67□□□□□ -0.38
GTF2A2-202ENST00000396060 CTSHP09668 335 aa12.67□□□□□ -0.38
GTF2A2-202ENST00000396060 ITGA4P13612 1032 aa12.67□□□□□ -0.38
GTF2A2-202ENST00000396060 ABCB4P21439 1286 aa12.67□□□□□ -0.38
GTF2A2-202ENST00000396060 GUCY2FP51841 1108 aa12.67□□□□□ -0.38
GTF2A2-202ENST00000396060 CKAP4Q07065 602 aaKnown RBP12.67□□□□□ -0.38
GTF2A2-202ENST00000396060 PTP4A2Q12974 167 aa12.67□□□□□ -0.38
GTF2A2-202ENST00000396060 MON1BQ7L1V2 547 aa12.67□□□□□ -0.38
GTF2A2-202ENST00000396060 NT5DC3Q86UY8 548 aa12.67□□□□□ -0.38
GTF2A2-202ENST00000396060 UNC93AQ86WB7 457 aa12.67□□□□□ -0.38
GTF2A2-202ENST00000396060 SLC4A11Q8NBS3 891 aa12.67□□□□□ -0.38
GTF2A2-202ENST00000396060 CAGE1Q8TC20 777 aa12.67□□□□□ -0.38
GTF2A2-202ENST00000396060 HES6Q96HZ4 224 aa12.67□□□□□ -0.38
GTF2A2-202ENST00000396060 RPS6KC1Q96S38 1066 aa12.67□□□□□ -0.38
GTF2A2-202ENST00000396060 SMYD3Q9H7B4 428 aa12.67□□□□□ -0.38
GTF2A2-202ENST00000396060 UBN1Q9NPG3 1134 aa12.67□□□□□ -0.38
GTF2A2-202ENST00000396060 SLC38A7Q9NVC3 462 aa12.67□□□□□ -0.38
GTF2A2-202ENST00000396060 TUBGCP4Q9UGJ1 667 aa12.67□□□□□ -0.38
GTF2A2-202ENST00000396060 OGDHLQ9ULD0 1010 aa12.67□□□□□ -0.38
GTF2A2-202ENST00000396060 SCN1AP35498 2009 aa12.67□□□□□ -0.38
GTF2A2-202ENST00000396060 PTGESO14684 152 aa12.66□□□□□ -0.38
GTF2A2-202ENST00000396060 BUB1BO60566 1050 aaPredicted RBP12.66□□□□□ -0.38
GTF2A2-202ENST00000396060 KIF4AO95239 1232 aa12.66□□□□□ -0.38
GTF2A2-202ENST00000396060 VDRP11473 427 aa12.66□□□□□ -0.38
GTF2A2-202ENST00000396060 CKBP12277 381 aa12.66□□□□□ -0.38
GTF2A2-202ENST00000396060 CD58P19256 250 aa12.66□□□□□ -0.38
GTF2A2-202ENST00000396060 MMP8P22894 467 aa12.66□□□□□ -0.38
GTF2A2-202ENST00000396060 CD52P31358 61 aa12.66□□□□□ -0.38
GTF2A2-202ENST00000396060 NSFP46459 744 aaKnown RBP12.66□□□□□ -0.38
GTF2A2-202ENST00000396060 TNNC1P63316 161 aa12.66□□□□□ -0.38
GTF2A2-202ENST00000396060 NFX1Q12986 1120 aaKnown RBP12.66□□□□□ -0.38
GTF2A2-202ENST00000396060 PAK2Q13177 524 aa12.66□□□□□ -0.38
GTF2A2-202ENST00000396060 RPS6KA1Q15418 735 aa12.66□□□□□ -0.38
GTF2A2-202ENST00000396060 CNGA2Q16280 664 aa12.66□□□□□ -0.38
GTF2A2-202ENST00000396060 ZNF618Q5T7W0 954 aa12.66□□□□□ -0.38
GTF2A2-202ENST00000396060 DPH6Q7L8W6 267 aa12.66□□□□□ -0.38
GTF2A2-202ENST00000396060 TMEM35BQ8NCS4 154 aa12.66□□□□□ -0.38
GTF2A2-202ENST00000396060 GSTCDQ8NEC7 633 aa12.66□□□□□ -0.38
GTF2A2-202ENST00000396060 TFAP2BQ92481 460 aa12.66□□□□□ -0.38
GTF2A2-202ENST00000396060 C18orf25Q96B23 403 aaPredicted RBP12.66□□□□□ -0.38
GTF2A2-202ENST00000396060 TMEM176AQ96HP8 235 aa12.66□□□□□ -0.38
GTF2A2-202ENST00000396060 PBKQ96KB5 322 aa12.66□□□□□ -0.38
GTF2A2-202ENST00000396060 ELOVL4Q9GZR5 314 aa12.66□□□□□ -0.38
GTF2A2-202ENST00000396060 UNC93B1Q9H1C4 597 aa12.66□□□□□ -0.38
GTF2A2-202ENST00000396060 OSGEPQ9NPF4 335 aa12.66□□□□□ -0.38
GTF2A2-202ENST00000396060 CTTNBP2NLQ9P2B4 639 aa12.66□□□□□ -0.38
GTF2A2-202ENST00000396060 CTAGE15A4D2H0 777 aa12.65□□□□□ -0.38
GTF2A2-202ENST00000396060 CALCAP01258 141 aa12.65□□□□□ -0.38
GTF2A2-202ENST00000396060 CFHP08603 1231 aa12.65□□□□□ -0.38
GTF2A2-202ENST00000396060 CTAGE8P0CG41 777 aa12.65□□□□□ -0.38
GTF2A2-202ENST00000396060 PAX3P23760 479 aa12.65□□□□□ -0.38
GTF2A2-202ENST00000396060 CDH8P55286 799 aa12.65□□□□□ -0.38
GTF2A2-202ENST00000396060 FAM189BP81408 668 aa12.65□□□□□ -0.38
GTF2A2-202ENST00000396060 STILQ15468 1287 aa12.65□□□□□ -0.38
GTF2A2-202ENST00000396060 LIN9Q5TKA1 542 aa12.65□□□□□ -0.38
GTF2A2-202ENST00000396060 NAA35Q5VZE5 725 aa12.65□□□□□ -0.38
GTF2A2-202ENST00000396060 PLEKHA7Q6IQ23 1121 aa12.65□□□□□ -0.38
GTF2A2-202ENST00000396060 CTAGE6Q86UF2 777 aa12.65□□□□□ -0.38
GTF2A2-202ENST00000396060 CTAGE4Q8IX94 777 aa12.65□□□□□ -0.38
GTF2A2-202ENST00000396060 WDTC1Q8N5D0 677 aa12.65□□□□□ -0.38
GTF2A2-202ENST00000396060 LRRN4CLQ8ND94 238 aa12.65□□□□□ -0.38
GTF2A2-202ENST00000396060 SH3TC2Q8TF17 1288 aa12.65□□□□□ -0.38
GTF2A2-202ENST00000396060 RABGGTAQ92696 567 aa12.65□□□□□ -0.38
GTF2A2-202ENST00000396060 ZNF653Q96CK0 615 aa12.65□□□□□ -0.38
GTF2A2-202ENST00000396060 PGBD4Q96DM1 585 aa12.65□□□□□ -0.38
GTF2A2-202ENST00000396060 ZNF560Q96MR9 790 aa12.65□□□□□ -0.38
GTF2A2-202ENST00000396060 APOL6Q9BWW8 343 aa12.65□□□□□ -0.38
GTF2A2-202ENST00000396060 TRPV6Q9H1D0 765 aa12.65□□□□□ -0.38
GTF2A2-202ENST00000396060 PDCL3Q9H2J4 239 aa12.65□□□□□ -0.38
GTF2A2-202ENST00000396060 CNOT8Q9UFF9 292 aaKnown RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms