RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 ATAD1Q8NBU5 361 aa17.52■□□□□ 0.4
CXCL12-206ENST00000395795 POMGNT1Q8WZA1 660 aa17.52■□□□□ 0.4
CXCL12-206ENST00000395795 ATOH1Q92858 354 aaPredicted RBP17.52■□□□□ 0.4
CXCL12-206ENST00000395795 HPS3Q969F9 1004 aa17.52■□□□□ 0.4
CXCL12-206ENST00000395795 PGLYRP2Q96PD5 576 aa17.52■□□□□ 0.4
CXCL12-206ENST00000395795 CBWD1Q9BRT8 395 aa17.52■□□□□ 0.4
CXCL12-206ENST00000395795 FOXQ1Q9C009 403 aa17.52■□□□□ 0.4
CXCL12-206ENST00000395795 COL4A2P08572 1712 aa17.52■□□□□ 0.39
CXCL12-206ENST00000395795 CPB1P15086 417 aa17.51■□□□□ 0.39
CXCL12-206ENST00000395795 GJA1P17302 382 aa17.51■□□□□ 0.39
CXCL12-206ENST00000395795 TXLNAP40222 546 aa17.51■□□□□ 0.39
CXCL12-206ENST00000395795 DUSP4Q13115 394 aa17.51■□□□□ 0.39
CXCL12-206ENST00000395795 MYBPC2Q14324 1141 aa17.51■□□□□ 0.39
CXCL12-206ENST00000395795 STK38Q15208 465 aa17.51■□□□□ 0.39
CXCL12-206ENST00000395795 CNNM4Q6P4Q7 775 aa17.51■□□□□ 0.39
CXCL12-206ENST00000395795 DSTYKQ6XUX3 929 aa17.51■□□□□ 0.39
CXCL12-206ENST00000395795 LRRTM3Q86VH5 581 aa17.51■□□□□ 0.39
CXCL12-206ENST00000395795 BRSK2Q8IWQ3 736 aa17.51■□□□□ 0.39
CXCL12-206ENST00000395795 SHKBP1Q8TBC3 707 aa17.51■□□□□ 0.39
CXCL12-206ENST00000395795 SAAL1Q96ER3 474 aa17.51■□□□□ 0.39
CXCL12-206ENST00000395795 ASB16Q96NS5 453 aa17.51■□□□□ 0.39
CXCL12-206ENST00000395795 ACCSQ96QU6 501 aa17.51■□□□□ 0.39
CXCL12-206ENST00000395795 MKNK1Q9BUB5 465 aa17.51■□□□□ 0.39
CXCL12-206ENST00000395795 OXCT2Q9BYC2 517 aaPredicted RBP17.51■□□□□ 0.39
CXCL12-206ENST00000395795 PANK4Q9NVE7 773 aa17.51■□□□□ 0.39
CXCL12-206ENST00000395795 DPP3Q9NY33 737 aa17.51■□□□□ 0.39
CXCL12-206ENST00000395795 MTF2Q9Y483 593 aaPredicted RBP17.51■□□□□ 0.39
CXCL12-206ENST00000395795 DMDP11532 3685 aa17.5■□□□□ 0.39
CXCL12-206ENST00000395795 SOAT2O75908 522 aa17.5■□□□□ 0.39
CXCL12-206ENST00000395795 PRPF6O94906 941 aaKnown RBP17.5■□□□□ 0.39
CXCL12-206ENST00000395795 GCNT3O95395 438 aa17.5■□□□□ 0.39
CXCL12-206ENST00000395795 YEATS4O95619 227 aa17.5■□□□□ 0.39
CXCL12-206ENST00000395795 IDEP14735 1019 aa17.5■□□□□ 0.39
CXCL12-206ENST00000395795 GARTP22102 1010 aa17.5■□□□□ 0.39
CXCL12-206ENST00000395795 EHHADHQ08426 723 aa17.5■□□□□ 0.39
CXCL12-206ENST00000395795 SNW1Q13573 536 aaKnown RBP17.5■□□□□ 0.39
CXCL12-206ENST00000395795 POSTNQ15063 836 aa17.5■□□□□ 0.39
CXCL12-206ENST00000395795 SLC44A4Q53GD3 710 aa17.5■□□□□ 0.39
CXCL12-206ENST00000395795 FOXD4L5Q5VV16 416 aaPredicted RBP17.5■□□□□ 0.39
CXCL12-206ENST00000395795 ASCL5Q7RTU5 278 aa17.5■□□□□ 0.39
CXCL12-206ENST00000395795 ZNF687Q8N1G0 1237 aa17.5■□□□□ 0.39
CXCL12-206ENST00000395795 FOXD4L4Q8WXT5 416 aaPredicted RBP17.5■□□□□ 0.39
CXCL12-206ENST00000395795 RSPRY1Q96DX4 576 aa17.5■□□□□ 0.39
CXCL12-206ENST00000395795 FAM213AQ9BRX8 229 aa17.5■□□□□ 0.39
CXCL12-206ENST00000395795 TRIM9Q9C026 710 aa17.5■□□□□ 0.39
CXCL12-206ENST00000395795 ZCWPW1Q9H0M4 648 aa17.5■□□□□ 0.39
CXCL12-206ENST00000395795 IRF2BPLQ9H1B7 796 aa17.5■□□□□ 0.39
CXCL12-206ENST00000395795 ZNF334Q9HCZ1 680 aaPredicted RBP17.5■□□□□ 0.39
CXCL12-206ENST00000395795 SLC27A5Q9Y2P5 690 aa17.5■□□□□ 0.39
CXCL12-206ENST00000395795 DCNP07585 359 aaKnown RBP17.49■□□□□ 0.39
CXCL12-206ENST00000395795 ZSCAN22P10073 491 aaPredicted RBP17.49■□□□□ 0.39
CXCL12-206ENST00000395795 PAX3P23760 479 aa17.49■□□□□ 0.39
CXCL12-206ENST00000395795 FZD5Q13467 585 aa17.49■□□□□ 0.39
CXCL12-206ENST00000395795 ANGPT1Q15389 498 aa17.49■□□□□ 0.39
CXCL12-206ENST00000395795 MLF2Q15773 248 aaPredicted RBP17.49■□□□□ 0.39
CXCL12-206ENST00000395795 WSCD1Q658N2 575 aa17.49■□□□□ 0.39
CXCL12-206ENST00000395795 GAREM2Q75VX8 874 aa17.49■□□□□ 0.39
CXCL12-206ENST00000395795 EPM2AIP1Q7L775 607 aaPredicted RBP17.49■□□□□ 0.39
CXCL12-206ENST00000395795 MAML2Q8IZL2 1156 aaPredicted RBP17.49■□□□□ 0.39
CXCL12-206ENST00000395795 C1orf127Q8N9H9 656 aa17.49■□□□□ 0.39
CXCL12-206ENST00000395795 PJA1Q8NG27 643 aa17.49■□□□□ 0.39
CXCL12-206ENST00000395795 ELSPBP1Q96BH3 223 aa17.49■□□□□ 0.39
CXCL12-206ENST00000395795 TNMDQ9H2S6 317 aa17.49■□□□□ 0.39
CXCL12-206ENST00000395795 TRPV4Q9HBA0 871 aa17.49■□□□□ 0.39
CXCL12-206ENST00000395795 SIX4Q9UIU6 781 aa17.49■□□□□ 0.39
CXCL12-206ENST00000395795 PCDHB13Q9Y5F0 798 aa17.49■□□□□ 0.39
CXCL12-206ENST00000395795 PTPRJQ12913 1337 aa17.48■□□□□ 0.39
CXCL12-206ENST00000395795 CACNA1IQ9P0X4 2223 aa17.48■□□□□ 0.39
CXCL12-206ENST00000395795 GOLGA8IPA6NC78 632 aa17.48■□□□□ 0.39
CXCL12-206ENST00000395795 GOLGA8JA6NMD2 632 aa17.48■□□□□ 0.39
CXCL12-206ENST00000395795 CYB561D2O14569 222 aa17.48■□□□□ 0.39
CXCL12-206ENST00000395795 CUTAO60888 179 aa17.48■□□□□ 0.39
CXCL12-206ENST00000395795 IL18RAPO95256 599 aa17.48■□□□□ 0.39
CXCL12-206ENST00000395795 F13A1P00488 732 aa17.48■□□□□ 0.39
CXCL12-206ENST00000395795 ODC1P11926 461 aa17.48■□□□□ 0.39
CXCL12-206ENST00000395795 TAF6P49848 677 aa17.48■□□□□ 0.39
CXCL12-206ENST00000395795 CDR1P51861 262 aa17.48■□□□□ 0.39
CXCL12-206ENST00000395795 TEAD2Q15562 447 aa17.48■□□□□ 0.39
CXCL12-206ENST00000395795 VITQ6UXI7 678 aa17.48■□□□□ 0.39
CXCL12-206ENST00000395795 PDZD4Q76G19 769 aaPredicted RBP17.48■□□□□ 0.39
CXCL12-206ENST00000395795 USP37Q86T82 979 aa17.48■□□□□ 0.39
CXCL12-206ENST00000395795 NT5DC4Q86YG4 428 aa17.48■□□□□ 0.39
CXCL12-206ENST00000395795 ZNF512Q96ME7 567 aaPredicted RBP17.48■□□□□ 0.39
CXCL12-206ENST00000395795 HSFX1Q9UBD0 423 aa17.48■□□□□ 0.39
CXCL12-206ENST00000395795 EXOC7Q9UPT5 735 aa17.48■□□□□ 0.39
CXCL12-206ENST00000395795 SIT1Q9Y3P8 196 aa17.48■□□□□ 0.39
CXCL12-206ENST00000395795 ZFHX2Q9C0A1 2572 aaPredicted RBP17.48■□□□□ 0.39
CXCL12-206ENST00000395795 KANSL1LA0AUZ9 987 aa17.47■□□□□ 0.39
CXCL12-206ENST00000395795 ARNTLO00327 626 aa17.47■□□□□ 0.39
CXCL12-206ENST00000395795 ZNF197O14709 1029 aa17.47■□□□□ 0.39
CXCL12-206ENST00000395795 EXTL3O43909 919 aa17.47■□□□□ 0.39
CXCL12-206ENST00000395795 ATF6P18850 670 aa17.47■□□□□ 0.39
CXCL12-206ENST00000395795 CD72P21854 359 aa17.47■□□□□ 0.39
CXCL12-206ENST00000395795 CASP1P29466 404 aa17.47■□□□□ 0.39
CXCL12-206ENST00000395795 VIPR2P41587 438 aa17.47■□□□□ 0.39
CXCL12-206ENST00000395795 ALCAMQ13740 583 aa17.47■□□□□ 0.39
CXCL12-206ENST00000395795 STXBP5Q5T5C0 1151 aa17.47■□□□□ 0.39
CXCL12-206ENST00000395795 FRMD5Q7Z6J6 570 aa17.47■□□□□ 0.39
CXCL12-206ENST00000395795 ZNF396Q96N95 335 aaPredicted RBP17.47■□□□□ 0.39
CXCL12-206ENST00000395795 LRRC3BQ96PB8 259 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms