RNA–Protein interactions for RNA: ENST00000395727.6

PTPN20-208, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-208ENST00000395727 GTF2F1P35269 517 aaKnown RBP eCLIP6.78□□□□□ -1.32
PTPN20-208ENST00000395727 BCAR1P56945 870 aa6.78□□□□□ -1.32
PTPN20-208ENST00000395727 ERVFC1P60507 584 aa6.78□□□□□ -1.32
PTPN20-208ENST00000395727 DAB2P98082 770 aa6.78□□□□□ -1.32
PTPN20-208ENST00000395727 NRG1Q02297 640 aaPredicted RBP6.78□□□□□ -1.32
PTPN20-208ENST00000395727 DSC1Q08554 894 aa6.78□□□□□ -1.32
PTPN20-208ENST00000395727 NCBP1Q09161 790 aaKnown RBP6.78□□□□□ -1.32
PTPN20-208ENST00000395727 SMC1AQ14683 1233 aaKnown RBP6.78□□□□□ -1.32
PTPN20-208ENST00000395727 BMS1Q14692 1282 aaKnown RBP6.78□□□□□ -1.32
PTPN20-208ENST00000395727 HERC4Q5GLZ8 1057 aaPredicted RBP6.78□□□□□ -1.32
PTPN20-208ENST00000395727 DTHD1Q6ZMT9 781 aa6.78□□□□□ -1.32
PTPN20-208ENST00000395727 DDX53Q86TM3 631 aaKnown RBP6.78□□□□□ -1.32
PTPN20-208ENST00000395727 CATSPER3Q86XQ3 398 aa6.78□□□□□ -1.32
PTPN20-208ENST00000395727 TMEM130Q8N3G9 435 aa6.78□□□□□ -1.32
PTPN20-208ENST00000395727 C4orf32Q8N8J7 132 aa6.78□□□□□ -1.32
PTPN20-208ENST00000395727 MRPL43Q8N983 215 aaKnown RBP6.78□□□□□ -1.32
PTPN20-208ENST00000395727 FAM184AQ8NB25 1140 aa6.78□□□□□ -1.32
PTPN20-208ENST00000395727 VN1R2Q8NFZ6 395 aa6.78□□□□□ -1.32
PTPN20-208ENST00000395727 URGCPQ8TCY9 931 aa6.78□□□□□ -1.32
PTPN20-208ENST00000395727 TMEM143Q96AN5 459 aa6.78□□□□□ -1.32
PTPN20-208ENST00000395727 TMEM169Q96HH4 297 aa6.78□□□□□ -1.32
PTPN20-208ENST00000395727 IGSF21Q96ID5 467 aa6.78□□□□□ -1.32
PTPN20-208ENST00000395727 ZNF668Q96K58 619 aaPredicted RBP6.78□□□□□ -1.32
PTPN20-208ENST00000395727 TCF25Q9BQ70 676 aa6.78□□□□□ -1.32
PTPN20-208ENST00000395727 RHOBTB2Q9BYZ6 727 aa6.78□□□□□ -1.32
PTPN20-208ENST00000395727 RAB34Q9BZG1 259 aa6.78□□□□□ -1.32
PTPN20-208ENST00000395727 NRSN2Q9GZP1 204 aa6.78□□□□□ -1.32
PTPN20-208ENST00000395727 MRPL18Q9H0U6 180 aaKnown RBP6.78□□□□□ -1.32
PTPN20-208ENST00000395727 CSRNP2Q9H175 543 aa6.78□□□□□ -1.32
PTPN20-208ENST00000395727 NRDE2Q9H7Z3 1164 aa6.78□□□□□ -1.32
PTPN20-208ENST00000395727 TLE6Q9H808 572 aa6.78□□□□□ -1.32
PTPN20-208ENST00000395727 UPF2Q9HAU5 1272 aaKnown RBP6.78□□□□□ -1.32
PTPN20-208ENST00000395727 ZFYVE1Q9HBF4 777 aa6.78□□□□□ -1.32
PTPN20-208ENST00000395727 ENTPD7Q9NQZ7 604 aa6.78□□□□□ -1.32
PTPN20-208ENST00000395727 FAM8A1Q9UBU6 413 aa6.78□□□□□ -1.32
PTPN20-208ENST00000395727 PARP2Q9UGN5 583 aa6.78□□□□□ -1.32
PTPN20-208ENST00000395727 NOL7Q9UMY1 257 aaKnown RBP6.78□□□□□ -1.32
PTPN20-208ENST00000395727 GIT1Q9Y2X7 761 aa6.78□□□□□ -1.32
PTPN20-208ENST00000395727 AK5Q9Y6K8 562 aa6.78□□□□□ -1.32
PTPN20-208ENST00000395727 A0A0C4DFX4 3053 aa6.78□□□□□ -1.32
PTPN20-208ENST00000395727 NCOR1O75376 2440 aa6.78□□□□□ -1.32
PTPN20-208ENST00000395727 PHLPP2Q6ZVD8 1323 aa6.77□□□□□ -1.32
PTPN20-208ENST00000395727 A0A1B0GUA9 196 aa6.77□□□□□ -1.33
PTPN20-208ENST00000395727 C2orf71A6NGG8 1288 aa6.77□□□□□ -1.33
PTPN20-208ENST00000395727 MEIS3P2A8K0S8 358 aa6.77□□□□□ -1.33
PTPN20-208ENST00000395727 HIDE1A8MVS5 230 aa6.77□□□□□ -1.33
PTPN20-208ENST00000395727 PRR33A8MZF0 331 aa6.77□□□□□ -1.33
PTPN20-208ENST00000395727 LOC730098B7Z3J9 87 aa6.77□□□□□ -1.33
PTPN20-208ENST00000395727 DDX3YO15523 660 aaKnown RBP6.77□□□□□ -1.33
PTPN20-208ENST00000395727 SLC26A4O43511 780 aa6.77□□□□□ -1.33
PTPN20-208ENST00000395727 DCXO43602 365 aa6.77□□□□□ -1.33
PTPN20-208ENST00000395727 DTNBO60941 627 aa6.77□□□□□ -1.33
PTPN20-208ENST00000395727 ZC3H11AO75152 810 aaKnown RBP eCLIP6.77□□□□□ -1.33
PTPN20-208ENST00000395727 WISP1O95388 367 aa6.77□□□□□ -1.33
PTPN20-208ENST00000395727 PAPLNO95428 1278 aa6.77□□□□□ -1.33
PTPN20-208ENST00000395727 SRGAP2CP0DJJ0 459 aa6.77□□□□□ -1.33
PTPN20-208ENST00000395727 CYP11B2P19099 503 aa6.77□□□□□ -1.33
PTPN20-208ENST00000395727 NAMPTP43490 491 aa6.77□□□□□ -1.33
PTPN20-208ENST00000395727 ARL4DP49703 201 aa6.77□□□□□ -1.33
PTPN20-208ENST00000395727 PPP2R5AQ15172 486 aa6.77□□□□□ -1.33
PTPN20-208ENST00000395727 RILPL1Q5EBL4 403 aa6.77□□□□□ -1.33
PTPN20-208ENST00000395727 TMEM31Q5JXX7 168 aa6.77□□□□□ -1.33
PTPN20-208ENST00000395727 ANKRD54Q6NXT1 300 aa6.77□□□□□ -1.33
PTPN20-208ENST00000395727 SLC27A1Q6PCB7 646 aa6.77□□□□□ -1.33
PTPN20-208ENST00000395727 HACE1Q8IYU2 909 aa6.77□□□□□ -1.33
PTPN20-208ENST00000395727 RNF168Q8IYW5 571 aaPredicted RBP6.77□□□□□ -1.33
PTPN20-208ENST00000395727 RNF169Q8NCN4 708 aa6.77□□□□□ -1.33
PTPN20-208ENST00000395727 SMG8Q8ND04 991 aaKnown RBP6.77□□□□□ -1.33
PTPN20-208ENST00000395727 PIGOQ8TEQ8 1089 aa6.77□□□□□ -1.33
PTPN20-208ENST00000395727 CASP10Q92851 521 aa6.77□□□□□ -1.33
PTPN20-208ENST00000395727 KCNN1Q92952 543 aa6.77□□□□□ -1.33
PTPN20-208ENST00000395727 CCDC43Q96MW1 224 aaKnown RBP6.77□□□□□ -1.33
PTPN20-208ENST00000395727 PHF7Q9BWX1 381 aaPredicted RBP6.77□□□□□ -1.33
PTPN20-208ENST00000395727 POLR3FQ9H1D9 316 aaPredicted RBP6.77□□□□□ -1.33
PTPN20-208ENST00000395727 C2orf40Q9H1Z8 148 aa6.77□□□□□ -1.33
PTPN20-208ENST00000395727 S1PR5Q9H228 398 aa6.77□□□□□ -1.33
PTPN20-208ENST00000395727 FZD8Q9H461 694 aa6.77□□□□□ -1.33
PTPN20-208ENST00000395727 EPHX3Q9H6B9 360 aa6.77□□□□□ -1.33
PTPN20-208ENST00000395727 PRMT7Q9NVM4 692 aaPredicted RBP6.77□□□□□ -1.33
PTPN20-208ENST00000395727 IPPQ9Y573 584 aa6.77□□□□□ -1.33
PTPN20-208ENST00000395727 HCFC2Q9Y5Z7 792 aa6.77□□□□□ -1.33
PTPN20-208ENST00000395727 DENND4AQ7Z401 1863 aa6.77□□□□□ -1.33
PTPN20-208ENST00000395727 F8W735 103 aaPredicted RBP6.76□□□□□ -1.33
PTPN20-208ENST00000395727 B4GALT3O60512 393 aa6.76□□□□□ -1.33
PTPN20-208ENST00000395727 EIF4EBP3O60516 100 aaPredicted RBP6.76□□□□□ -1.33
PTPN20-208ENST00000395727 USO1O60763 962 aaKnown RBP6.76□□□□□ -1.33
PTPN20-208ENST00000395727 ITGA4P13612 1032 aa6.76□□□□□ -1.33
PTPN20-208ENST00000395727 ARF4P18085 180 aaPredicted RBP6.76□□□□□ -1.33
PTPN20-208ENST00000395727 ATP2B1P20020 1258 aa6.76□□□□□ -1.33
PTPN20-208ENST00000395727 PBX3P40426 434 aa6.76□□□□□ -1.33
PTPN20-208ENST00000395727 TECP42680 631 aa6.76□□□□□ -1.33
PTPN20-208ENST00000395727 TOB1P50616 345 aaPredicted RBP6.76□□□□□ -1.33
PTPN20-208ENST00000395727 EFNA5P52803 228 aa6.76□□□□□ -1.33
PTPN20-208ENST00000395727 GUCY1B3Q02153 619 aa6.76□□□□□ -1.33
PTPN20-208ENST00000395727 RNASELQ05823 741 aaKnown RBP6.76□□□□□ -1.33
PTPN20-208ENST00000395727 ITIH3Q06033 890 aa6.76□□□□□ -1.33
PTPN20-208ENST00000395727 GRIK3Q13003 919 aa6.76□□□□□ -1.33
PTPN20-208ENST00000395727 GNL2Q13823 731 aaKnown RBP6.76□□□□□ -1.33
PTPN20-208ENST00000395727 HYIQ5T013 277 aa6.76□□□□□ -1.33
PTPN20-208ENST00000395727 PLPP4Q5VZY2 271 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms