RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 AKR1B15C9JRZ8 316 aaPredicted RBP12.33□□□□□ -0.43
RTN1-203ENST00000395090 STX10O60499 249 aa12.33□□□□□ -0.43
RTN1-203ENST00000395090 MCF2P10911 925 aa12.33□□□□□ -0.43
RTN1-203ENST00000395090 SOX18P35713 384 aa12.33□□□□□ -0.43
RTN1-203ENST00000395090 ACOT2P49753 483 aa12.33□□□□□ -0.43
RTN1-203ENST00000395090 KLK7P49862 253 aa12.33□□□□□ -0.43
RTN1-203ENST00000395090 CDK7P50613 346 aa12.33□□□□□ -0.43
RTN1-203ENST00000395090 FXR1P51114 621 aaKnown RBP eCLIP12.33□□□□□ -0.43
RTN1-203ENST00000395090 MRPS6P82932 125 aaKnown RBP12.33□□□□□ -0.43
RTN1-203ENST00000395090 PPP3CAQ08209 521 aa12.33□□□□□ -0.43
RTN1-203ENST00000395090 NOLC1Q14978 699 aaKnown RBP eCLIP12.33□□□□□ -0.43
RTN1-203ENST00000395090 PKN2Q16513 984 aaKnown RBP12.33□□□□□ -0.43
RTN1-203ENST00000395090 ZNF468Q5VIY5 522 aaPredicted RBP12.33□□□□□ -0.43
RTN1-203ENST00000395090 EEF1DP3Q658K8 133 aa12.33□□□□□ -0.43
RTN1-203ENST00000395090 FBXO46Q6PJ61 603 aaPredicted RBP12.33□□□□□ -0.43
RTN1-203ENST00000395090 TMEM40Q8WWA1 233 aa12.33□□□□□ -0.43
RTN1-203ENST00000395090 WNT8BQ93098 351 aa12.33□□□□□ -0.43
RTN1-203ENST00000395090 SCLT1Q96NL6 688 aa12.33□□□□□ -0.43
RTN1-203ENST00000395090 DEFB118Q96PH6 123 aa12.33□□□□□ -0.43
RTN1-203ENST00000395090 OSMRQ99650 979 aa12.33□□□□□ -0.43
RTN1-203ENST00000395090 RNF208Q9H0X6 261 aa12.33□□□□□ -0.43
RTN1-203ENST00000395090 KCNF1Q9H3M0 494 aa12.33□□□□□ -0.43
RTN1-203ENST00000395090 PDZD7Q9H5P4 517 aa12.33□□□□□ -0.43
RTN1-203ENST00000395090 PLCB1Q9NQ66 1216 aa12.33□□□□□ -0.43
RTN1-203ENST00000395090 ANKFY1Q9P2R3 1169 aa12.33□□□□□ -0.43
RTN1-203ENST00000395090 TTC26A0AVF1 554 aa12.33□□□□□ -0.44
RTN1-203ENST00000395090 C2CD2LO14523 706 aa12.33□□□□□ -0.44
RTN1-203ENST00000395090 N4BP1O75113 896 aaKnown RBP12.33□□□□□ -0.44
RTN1-203ENST00000395090 NOL4O94818 638 aa12.33□□□□□ -0.44
RTN1-203ENST00000395090 ERLIN2O94905 339 aa12.33□□□□□ -0.44
RTN1-203ENST00000395090 CHRNA1P02708 482 aa12.33□□□□□ -0.44
RTN1-203ENST00000395090 TRIM49P0CI25 452 aa12.33□□□□□ -0.44
RTN1-203ENST00000395090 TRIM49CP0CI26 452 aa12.33□□□□□ -0.44
RTN1-203ENST00000395090 VSIG8P0DPA2 414 aa12.33□□□□□ -0.44
RTN1-203ENST00000395090 PON1P27169 355 aa12.33□□□□□ -0.44
RTN1-203ENST00000395090 AXLP30530 894 aa12.33□□□□□ -0.44
RTN1-203ENST00000395090 CASP14P31944 242 aa12.33□□□□□ -0.44
RTN1-203ENST00000395090 ADKP55263 362 aaKnown RBP12.33□□□□□ -0.44
RTN1-203ENST00000395090 NCBP1Q09161 790 aaKnown RBP12.33□□□□□ -0.44
RTN1-203ENST00000395090 EXOC3L4Q17RC7 722 aa12.33□□□□□ -0.44
RTN1-203ENST00000395090 CBWD6Q4V339 395 aa12.33□□□□□ -0.44
RTN1-203ENST00000395090 CBWD3Q5JTY5 395 aa12.33□□□□□ -0.44
RTN1-203ENST00000395090 CBWD5Q5RIA9 395 aa12.33□□□□□ -0.44
RTN1-203ENST00000395090 ZBTB41Q5SVQ8 909 aa12.33□□□□□ -0.44
RTN1-203ENST00000395090 GBP6Q6ZN66 633 aa12.33□□□□□ -0.44
RTN1-203ENST00000395090 CNGA4Q8IV77 575 aa12.33□□□□□ -0.44
RTN1-203ENST00000395090 GPR161Q8N6U8 529 aaKnown RBP12.33□□□□□ -0.44
RTN1-203ENST00000395090 LMO3Q8TAP4 145 aa12.33□□□□□ -0.44
RTN1-203ENST00000395090 ARMC5Q96C12 935 aa12.33□□□□□ -0.44
RTN1-203ENST00000395090 ZNF333Q96JL9 665 aa12.33□□□□□ -0.44
RTN1-203ENST00000395090 ZNF830Q96NB3 372 aaPredicted RBP12.33□□□□□ -0.44
RTN1-203ENST00000395090 PANX2Q96RD6 677 aa12.33□□□□□ -0.44
RTN1-203ENST00000395090 CDT1Q9H211 546 aa12.33□□□□□ -0.44
RTN1-203ENST00000395090 MMRN2Q9H8L6 949 aa12.33□□□□□ -0.44
RTN1-203ENST00000395090 GINS2Q9Y248 185 aa12.33□□□□□ -0.44
RTN1-203ENST00000395090 COQ4Q9Y3A0 265 aa12.33□□□□□ -0.44
RTN1-203ENST00000395090 A0A0U1RQG5 324 aaPredicted RBP12.32□□□□□ -0.44
RTN1-203ENST00000395090 LRRIQ3A6PVS8 624 aaPredicted RBP12.32□□□□□ -0.44
RTN1-203ENST00000395090 KBTBD13C9JR72 458 aa12.32□□□□□ -0.44
RTN1-203ENST00000395090 ARVCFO00192 962 aa12.32□□□□□ -0.44
RTN1-203ENST00000395090 TERTO14746 1132 aaKnown RBP12.32□□□□□ -0.44
RTN1-203ENST00000395090 TPM1P09493 284 aa12.32□□□□□ -0.44
RTN1-203ENST00000395090 TRIM21P19474 475 aaKnown RBP12.32□□□□□ -0.44
RTN1-203ENST00000395090 MATR3P43243 847 aaKnown RBP eCLIP12.32□□□□□ -0.44
RTN1-203ENST00000395090 LBX1P52954 281 aa12.32□□□□□ -0.44
RTN1-203ENST00000395090 MGAT3Q09327 533 aa12.32□□□□□ -0.44
RTN1-203ENST00000395090 KYAT1Q16773 422 aa12.32□□□□□ -0.44
RTN1-203ENST00000395090 TRIM71Q2Q1W2 868 aaKnown RBP12.32□□□□□ -0.44
RTN1-203ENST00000395090 ZNF568Q3ZCX4 644 aa12.32□□□□□ -0.44
RTN1-203ENST00000395090 CATSPER4Q7RTX7 472 aa12.32□□□□□ -0.44
RTN1-203ENST00000395090 SYT9Q86SS6 491 aa12.32□□□□□ -0.44
RTN1-203ENST00000395090 BRSK2Q8IWQ3 736 aa12.32□□□□□ -0.44
RTN1-203ENST00000395090 CPLX3Q8WVH0 158 aa12.32□□□□□ -0.44
RTN1-203ENST00000395090 CCDC127Q96BQ5 260 aa12.32□□□□□ -0.44
RTN1-203ENST00000395090 CCDC51Q96ER9 411 aa12.32□□□□□ -0.44
RTN1-203ENST00000395090 CPB2Q96IY4 423 aa12.32□□□□□ -0.44
RTN1-203ENST00000395090 POP1Q99575 1024 aaKnown RBP12.32□□□□□ -0.44
RTN1-203ENST00000395090 CRACR2AQ9BSW2 395 aa12.32□□□□□ -0.44
RTN1-203ENST00000395090 SENP6Q9GZR1 1112 aaPredicted RBP12.32□□□□□ -0.44
RTN1-203ENST00000395090 STARD7Q9NQZ5 370 aa12.32□□□□□ -0.44
RTN1-203ENST00000395090 TRMT13Q9NUP7 481 aaKnown RBP12.32□□□□□ -0.44
RTN1-203ENST00000395090 RBAKQ9NYW8 714 aaPredicted RBP12.32□□□□□ -0.44
RTN1-203ENST00000395090 KIAA1522Q9P206 1035 aaPredicted RBP12.32□□□□□ -0.44
RTN1-203ENST00000395090 KANSL3Q9P2N6 904 aa12.32□□□□□ -0.44
RTN1-203ENST00000395090 FBXL5Q9UKA1 691 aa12.32□□□□□ -0.44
RTN1-203ENST00000395090 LUC7L2Q9Y383 392 aaKnown RBP12.32□□□□□ -0.44
RTN1-203ENST00000395090 TRPV2Q9Y5S1 764 aa12.32□□□□□ -0.44
RTN1-203ENST00000395090 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.32□□□□□ -0.44
RTN1-203ENST00000395090 EPHB6O15197 1021 aa12.31□□□□□ -0.44
RTN1-203ENST00000395090 MFAP3LO75121 409 aa12.31□□□□□ -0.44
RTN1-203ENST00000395090 CAND2O75155 1236 aa12.31□□□□□ -0.44
RTN1-203ENST00000395090 SLC9A1P19634 815 aa12.31□□□□□ -0.44
RTN1-203ENST00000395090 CTCFP49711 727 aaPredicted RBP12.31□□□□□ -0.44
RTN1-203ENST00000395090 ZBED6P86452 979 aa12.31□□□□□ -0.44
RTN1-203ENST00000395090 PLAURQ03405 335 aa12.31□□□□□ -0.44
RTN1-203ENST00000395090 LRMPQ12912 555 aa12.31□□□□□ -0.44
RTN1-203ENST00000395090 C15orf39Q6ZRI6 1047 aa12.31□□□□□ -0.44
RTN1-203ENST00000395090 GALNT12Q8IXK2 581 aa12.31□□□□□ -0.44
RTN1-203ENST00000395090 DHX38Q92620 1227 aaKnown RBP12.31□□□□□ -0.44
RTN1-203ENST00000395090 DNAJC7Q99615 494 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms