RNA–Protein interactions for RNA: ENST00000394849.1

UPK3B-203, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 1,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-203ENST00000394849 PDIA5Q14554 519 aa21.48■■□□□ 1.03
UPK3B-203ENST00000394849 TXNDC11Q6PKC3 985 aa21.48■■□□□ 1.03
UPK3B-203ENST00000394849 ITIH5Q86UX2 942 aa21.48■■□□□ 1.03
UPK3B-203ENST00000394849 NECAB1Q8N987 351 aa21.48■■□□□ 1.03
UPK3B-203ENST00000394849 RAB34Q9BZG1 259 aa21.48■■□□□ 1.03
UPK3B-203ENST00000394849 ARRDC1-AS1Q9H2J1 176 aa21.48■■□□□ 1.03
UPK3B-203ENST00000394849 POLD4Q9HCU8 107 aa21.48■■□□□ 1.03
UPK3B-203ENST00000394849 THG1LQ9NWX6 298 aaKnown RBP21.48■■□□□ 1.03
UPK3B-203ENST00000394849 ZMYM5Q9UJ78 669 aa21.48■■□□□ 1.03
UPK3B-203ENST00000394849 KIAA1024Q9UPX6 916 aa21.48■■□□□ 1.03
UPK3B-203ENST00000394849 ABLIM1O14639 778 aa21.47■■□□□ 1.03
UPK3B-203ENST00000394849 AXIN1O15169 862 aa21.47■■□□□ 1.03
UPK3B-203ENST00000394849 TOM1L1O75674 476 aa21.47■■□□□ 1.03
UPK3B-203ENST00000394849 RPP40O75818 363 aaKnown RBP21.47■■□□□ 1.03
UPK3B-203ENST00000394849 EPN2O95208 641 aa21.47■■□□□ 1.03
UPK3B-203ENST00000394849 RAP1GAPP47736 663 aa21.47■■□□□ 1.03
UPK3B-203ENST00000394849 STRN3Q13033 797 aa21.47■■□□□ 1.03
UPK3B-203ENST00000394849 DUSP4Q13115 394 aa21.47■■□□□ 1.03
UPK3B-203ENST00000394849 MYBPC2Q14324 1141 aa21.47■■□□□ 1.03
UPK3B-203ENST00000394849 PON2Q15165 354 aa21.47■■□□□ 1.03
UPK3B-203ENST00000394849 ME3Q16798 604 aa21.47■■□□□ 1.03
UPK3B-203ENST00000394849 PSMG2Q969U7 264 aa21.47■■□□□ 1.03
UPK3B-203ENST00000394849 NTPCRQ9BSD7 190 aaKnown RBP21.47■■□□□ 1.03
UPK3B-203ENST00000394849 TIPINQ9BVW5 301 aa21.47■■□□□ 1.03
UPK3B-203ENST00000394849 DNAJC25Q9H1X3 360 aa21.47■■□□□ 1.03
UPK3B-203ENST00000394849 GTSE1Q9NYZ3 720 aa21.47■■□□□ 1.03
UPK3B-203ENST00000394849 LRWD1Q9UFC0 647 aa21.47■■□□□ 1.03
UPK3B-203ENST00000394849 DNM3Q9UQ16 869 aa21.47■■□□□ 1.03
UPK3B-203ENST00000394849 PAX3P23760 479 aa21.46■■□□□ 1.03
UPK3B-203ENST00000394849 LRPAP1P30533 357 aa21.46■■□□□ 1.03
UPK3B-203ENST00000394849 NOLC1Q14978 699 aaKnown RBP eCLIP21.46■■□□□ 1.03
UPK3B-203ENST00000394849 SLC10A6Q3KNW5 377 aa21.46■■□□□ 1.03
UPK3B-203ENST00000394849 ITPRIPL2Q3MIP1 535 aa21.46■■□□□ 1.03
UPK3B-203ENST00000394849 WDR44Q5JSH3 913 aa21.46■■□□□ 1.03
UPK3B-203ENST00000394849 STPG1Q5TH74 334 aa21.46■■□□□ 1.03
UPK3B-203ENST00000394849 TAS1R3Q7RTX0 852 aa21.46■■□□□ 1.03
UPK3B-203ENST00000394849 TSPAN18Q96SJ8 248 aa21.46■■□□□ 1.03
UPK3B-203ENST00000394849 ATXN3LQ9H3M9 355 aa21.46■■□□□ 1.03
UPK3B-203ENST00000394849 DDX19AQ9NUU7 478 aaKnown RBP21.46■■□□□ 1.03
UPK3B-203ENST00000394849 XPOTO43592 962 aaKnown RBP21.45■■□□□ 1.02
UPK3B-203ENST00000394849 HIP1RO75146 1068 aa21.45■■□□□ 1.02
UPK3B-203ENST00000394849 CYP3A5P20815 502 aa21.45■■□□□ 1.02
UPK3B-203ENST00000394849 TRAPPC10P48553 1259 aa21.45■■□□□ 1.02
UPK3B-203ENST00000394849 AARSP49588 968 aaKnown RBP eCLIP21.45■■□□□ 1.02
UPK3B-203ENST00000394849 SF3A2Q15428 464 aaKnown RBP21.45■■□□□ 1.02
UPK3B-203ENST00000394849 ZNF174Q15697 407 aa21.45■■□□□ 1.02
UPK3B-203ENST00000394849 ECM1Q16610 540 aa21.45■■□□□ 1.02
UPK3B-203ENST00000394849 CENPPQ6IPU0 288 aa21.45■■□□□ 1.02
UPK3B-203ENST00000394849 ZPBP2Q6X784 338 aa21.45■■□□□ 1.02
UPK3B-203ENST00000394849 DNAJB7Q7Z6W7 309 aaPredicted RBP21.45■■□□□ 1.02
UPK3B-203ENST00000394849 BPIFB1Q8TDL5 484 aa21.45■■□□□ 1.02
UPK3B-203ENST00000394849 ZC3H10Q96K80 434 aaKnown RBP21.45■■□□□ 1.02
UPK3B-203ENST00000394849 TMEM209Q96SK2 561 aa21.45■■□□□ 1.02
UPK3B-203ENST00000394849 LSM14BQ9BX40 385 aaKnown RBP21.45■■□□□ 1.02
UPK3B-203ENST00000394849 FOXP1Q9H334 677 aaPredicted RBP21.45■■□□□ 1.02
UPK3B-203ENST00000394849 CCDC192P0DO97 292 aa21.44■■□□□ 1.02
UPK3B-203ENST00000394849 TYMPP19971 482 aa21.44■■□□□ 1.02
UPK3B-203ENST00000394849 AMPD2Q01433 879 aa21.44■■□□□ 1.02
UPK3B-203ENST00000394849 KYAT1Q16773 422 aa21.44■■□□□ 1.02
UPK3B-203ENST00000394849 PLA2G2CQ5R387 149 aa21.44■■□□□ 1.02
UPK3B-203ENST00000394849 GPR158Q5T848 1215 aa21.44■■□□□ 1.02
UPK3B-203ENST00000394849 GAREM2Q75VX8 874 aa21.44■■□□□ 1.02
UPK3B-203ENST00000394849 DAW1Q8N136 415 aa21.44■■□□□ 1.02
UPK3B-203ENST00000394849 CAMKK1Q8N5S9 505 aa21.44■■□□□ 1.02
UPK3B-203ENST00000394849 PGLYRP2Q96PD5 576 aa21.44■■□□□ 1.02
UPK3B-203ENST00000394849 MKNK1Q9BUB5 465 aa21.44■■□□□ 1.02
UPK3B-203ENST00000394849 TASP1Q9H6P5 420 aa21.44■■□□□ 1.02
UPK3B-203ENST00000394849 VPS45Q9NRW7 570 aa21.44■■□□□ 1.02
UPK3B-203ENST00000394849 C2orf42Q9NWW7 574 aa21.44■■□□□ 1.02
UPK3B-203ENST00000394849 TUBGCP4Q9UGJ1 667 aa21.44■■□□□ 1.02
UPK3B-203ENST00000394849 UBQLN1Q9UMX0 589 aaKnown RBP21.44■■□□□ 1.02
UPK3B-203ENST00000394849 SLC8A2Q9UPR5 921 aa21.44■■□□□ 1.02
UPK3B-203ENST00000394849 CLDN3O15551 220 aa21.43■■□□□ 1.02
UPK3B-203ENST00000394849 VNN2O95498 520 aa21.43■■□□□ 1.02
UPK3B-203ENST00000394849 PROS1P07225 676 aa21.43■■□□□ 1.02
UPK3B-203ENST00000394849 CLTAP09496 248 aa21.43■■□□□ 1.02
UPK3B-203ENST00000394849 HARSP12081 509 aaKnown RBP21.43■■□□□ 1.02
UPK3B-203ENST00000394849 GABRR2P28476 465 aa21.43■■□□□ 1.02
UPK3B-203ENST00000394849 TUFMP49411 452 aaKnown RBP21.43■■□□□ 1.02
UPK3B-203ENST00000394849 MCM2P49736 904 aa21.43■■□□□ 1.02
UPK3B-203ENST00000394849 FOSBP53539 338 aa21.43■■□□□ 1.02
UPK3B-203ENST00000394849 SMTNP53814 917 aa21.43■■□□□ 1.02
UPK3B-203ENST00000394849 GRSF1Q12849 480 aaKnown RBP eCLIP21.43■■□□□ 1.02
UPK3B-203ENST00000394849 TTC38Q5R3I4 469 aa21.43■■□□□ 1.02
UPK3B-203ENST00000394849 STXBP5Q5T5C0 1151 aa21.43■■□□□ 1.02
UPK3B-203ENST00000394849 OVOS1Q6IE37 1185 aa21.43■■□□□ 1.02
UPK3B-203ENST00000394849 ARMCX5Q6P1M9 558 aa21.43■■□□□ 1.02
UPK3B-203ENST00000394849 DSTYKQ6XUX3 929 aa21.43■■□□□ 1.02
UPK3B-203ENST00000394849 SPIRE2Q8WWL2 714 aa21.43■■□□□ 1.02
UPK3B-203ENST00000394849 EXOC4Q96A65 974 aa21.43■■□□□ 1.02
UPK3B-203ENST00000394849 ZFYVE19Q96K21 471 aa21.43■■□□□ 1.02
UPK3B-203ENST00000394849 LRRC3BQ96PB8 259 aa21.43■■□□□ 1.02
UPK3B-203ENST00000394849 GCNAQ96QF7 691 aa21.43■■□□□ 1.02
UPK3B-203ENST00000394849 ANKFY1Q9P2R3 1169 aa21.43■■□□□ 1.02
UPK3B-203ENST00000394849 LAMA1P25391 3075 aa21.42■■□□□ 1.02
UPK3B-203ENST00000394849 MEFVO15553 781 aaPredicted RBP21.42■■□□□ 1.02
UPK3B-203ENST00000394849 EXTL3O43909 919 aa21.42■■□□□ 1.02
UPK3B-203ENST00000394849 JAK2O60674 1132 aa21.42■■□□□ 1.02
UPK3B-203ENST00000394849 KCNK5O95279 499 aa21.42■■□□□ 1.02
UPK3B-203ENST00000394849 CDC25CP30307 473 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms