RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 CST3P01034 146 aaPredicted RBP20.45■□□□□ 0.86
PDLIM7-204ENST00000393546 CYP11A1P05108 521 aa20.45■□□□□ 0.86
PDLIM7-204ENST00000393546 EPB41P11171 864 aaKnown RBP20.45■□□□□ 0.86
PDLIM7-204ENST00000393546 BMP1P13497 986 aa20.45■□□□□ 0.86
PDLIM7-204ENST00000393546 PMS1P54277 932 aaKnown RBP20.45■□□□□ 0.86
PDLIM7-204ENST00000393546 ARPP19P56211 112 aa20.45■□□□□ 0.86
PDLIM7-204ENST00000393546 ENPEPQ07075 957 aa20.45■□□□□ 0.86
PDLIM7-204ENST00000393546 OVOS1Q6IE37 1185 aa20.45■□□□□ 0.86
PDLIM7-204ENST00000393546 SLC8B1Q6J4K2 584 aa20.45■□□□□ 0.86
PDLIM7-204ENST00000393546 CES5AQ6NT32 575 aa20.45■□□□□ 0.86
PDLIM7-204ENST00000393546 SMRP1Q8NCR6 262 aa20.45■□□□□ 0.86
PDLIM7-204ENST00000393546 KREMEN2Q8NCW0 462 aa20.45■□□□□ 0.86
PDLIM7-204ENST00000393546 EEF2KMTQ96G04 330 aa20.45■□□□□ 0.86
PDLIM7-204ENST00000393546 HPDLQ96IR7 371 aa20.45■□□□□ 0.86
PDLIM7-204ENST00000393546 S1PR5Q9H228 398 aa20.45■□□□□ 0.86
PDLIM7-204ENST00000393546 TRIM49BA6NDI0 452 aa20.44■□□□□ 0.86
PDLIM7-204ENST00000393546 HUS1O60921 280 aa20.44■□□□□ 0.86
PDLIM7-204ENST00000393546 MBD3O95983 291 aa20.44■□□□□ 0.86
PDLIM7-204ENST00000393546 C4BPAP04003 597 aaKnown RBP20.44■□□□□ 0.86
PDLIM7-204ENST00000393546 DLG4P78352 724 aa20.44■□□□□ 0.86
PDLIM7-204ENST00000393546 ITIH3Q06033 890 aa20.44■□□□□ 0.86
PDLIM7-204ENST00000393546 BIRC3Q13489 604 aa20.44■□□□□ 0.86
PDLIM7-204ENST00000393546 RARS2Q5T160 578 aaKnown RBP20.44■□□□□ 0.86
PDLIM7-204ENST00000393546 SCARA3Q6AZY7 606 aa20.44■□□□□ 0.86
PDLIM7-204ENST00000393546 THEM5Q8N1Q8 247 aa20.44■□□□□ 0.86
PDLIM7-204ENST00000393546 C12orf76Q8N812 135 aaPredicted RBP20.44■□□□□ 0.86
PDLIM7-204ENST00000393546 APOL5Q9BWW9 433 aa20.44■□□□□ 0.86
PDLIM7-204ENST00000393546 SFXN1Q9H9B4 322 aa20.44■□□□□ 0.86
PDLIM7-204ENST00000393546 GDAP2Q9NXN4 497 aa20.44■□□□□ 0.86
PDLIM7-204ENST00000393546 PLXNA3P51805 1871 aa20.43■□□□□ 0.86
PDLIM7-204ENST00000393546 MTCL1Q9Y4B5 1905 aaKnown RBP20.43■□□□□ 0.86
PDLIM7-204ENST00000393546 OR6C75A6NL08 312 aa20.43■□□□□ 0.86
PDLIM7-204ENST00000393546 SLC16A3O15427 465 aaKnown RBP20.43■□□□□ 0.86
PDLIM7-204ENST00000393546 WSCD1Q658N2 575 aa20.43■□□□□ 0.86
PDLIM7-204ENST00000393546 FOXR2Q6PJQ5 311 aa20.43■□□□□ 0.86
PDLIM7-204ENST00000393546 ZC3H3Q8IXZ2 948 aaKnown RBP20.43■□□□□ 0.86
PDLIM7-204ENST00000393546 ZNF461Q8TAF7 563 aa20.43■□□□□ 0.86
PDLIM7-204ENST00000393546 ADAM7Q9H2U9 754 aa20.43■□□□□ 0.86
PDLIM7-204ENST00000393546 CTNND2Q9UQB3 1225 aa20.43■□□□□ 0.86
PDLIM7-204ENST00000393546 SNX9Q9Y5X1 595 aa20.43■□□□□ 0.86
PDLIM7-204ENST00000393546 ATICP31939 592 aa20.42■□□□□ 0.86
PDLIM7-204ENST00000393546 ELF1P32519 619 aa20.42■□□□□ 0.86
PDLIM7-204ENST00000393546 ROR1Q01973 937 aa20.42■□□□□ 0.86
PDLIM7-204ENST00000393546 PAK1Q13153 545 aa20.42■□□□□ 0.86
PDLIM7-204ENST00000393546 LIN9Q5TKA1 542 aa20.42■□□□□ 0.86
PDLIM7-204ENST00000393546 TDRD10Q5VZ19 366 aaKnown RBP20.42■□□□□ 0.86
PDLIM7-204ENST00000393546 TPGS2Q68CL5 300 aa20.42■□□□□ 0.86
PDLIM7-204ENST00000393546 TTI2Q6NXR4 508 aa20.42■□□□□ 0.86
PDLIM7-204ENST00000393546 DPH6Q7L8W6 267 aa20.42■□□□□ 0.86
PDLIM7-204ENST00000393546 TMEM86AQ8N2M4 240 aa20.42■□□□□ 0.86
PDLIM7-204ENST00000393546 MLKLQ8NB16 471 aa20.42■□□□□ 0.86
PDLIM7-204ENST00000393546 CEP63Q96MT8 703 aa20.42■□□□□ 0.86
PDLIM7-204ENST00000393546 FBXW11Q9UKB1 542 aa20.42■□□□□ 0.86
PDLIM7-204ENST00000393546 USP15Q9Y4E8 981 aaPredicted RBP20.42■□□□□ 0.86
PDLIM7-204ENST00000393546 TCF20Q9UGU0 1960 aaKnown RBP20.41■□□□□ 0.86
PDLIM7-204ENST00000393546 CCDC195A0A1B0GUA6 201 aa20.41■□□□□ 0.86
PDLIM7-204ENST00000393546 STX10O60499 249 aa20.41■□□□□ 0.86
PDLIM7-204ENST00000393546 ABLIM3O94929 683 aa20.41■□□□□ 0.86
PDLIM7-204ENST00000393546 CPB1P15086 417 aa20.41■□□□□ 0.86
PDLIM7-204ENST00000393546 IL9P15248 144 aa20.41■□□□□ 0.86
PDLIM7-204ENST00000393546 STX17P56962 302 aa20.41■□□□□ 0.86
PDLIM7-204ENST00000393546 MCCD1P59942 119 aaPredicted RBP20.41■□□□□ 0.86
PDLIM7-204ENST00000393546 MYL6P60660 151 aa20.41■□□□□ 0.86
PDLIM7-204ENST00000393546 SMAD2Q15796 467 aaKnown RBP20.41■□□□□ 0.86
PDLIM7-204ENST00000393546 UVSSAQ2YD98 709 aa20.41■□□□□ 0.86
PDLIM7-204ENST00000393546 ZACNQ401N2 412 aa20.41■□□□□ 0.86
PDLIM7-204ENST00000393546 ATAT1Q5SQI0 421 aa20.41■□□□□ 0.86
PDLIM7-204ENST00000393546 C1orf220Q5T0J3 134 aa20.41■□□□□ 0.86
PDLIM7-204ENST00000393546 TMC5Q6UXY8 1006 aa20.41■□□□□ 0.86
PDLIM7-204ENST00000393546 SV2AQ7L0J3 742 aa20.41■□□□□ 0.86
PDLIM7-204ENST00000393546 RTL10Q7L3V2 364 aa20.41■□□□□ 0.86
PDLIM7-204ENST00000393546 FILIP1Q7Z7B0 1213 aa20.41■□□□□ 0.86
PDLIM7-204ENST00000393546 TOP6BLQ8N6T0 577 aa20.41■□□□□ 0.86
PDLIM7-204ENST00000393546 CMASQ8NFW8 434 aaPredicted RBP20.41■□□□□ 0.86
PDLIM7-204ENST00000393546 SYAP1Q96A49 352 aaPredicted RBP20.41■□□□□ 0.86
PDLIM7-204ENST00000393546 RIPOR3Q96MK2 946 aa20.41■□□□□ 0.86
PDLIM7-204ENST00000393546 DUSP9Q99956 384 aaKnown RBP20.41■□□□□ 0.86
PDLIM7-204ENST00000393546 WDR27A2RRH5 827 aa20.4■□□□□ 0.86
PDLIM7-204ENST00000393546 XIRP2A4UGR9 3374 aa20.4■□□□□ 0.86
PDLIM7-204ENST00000393546 ZMYND10O75800 440 aa20.4■□□□□ 0.86
PDLIM7-204ENST00000393546 STAU1O95793 577 aaKnown RBP20.4■□□□□ 0.86
PDLIM7-204ENST00000393546 TRIM49P0CI25 452 aa20.4■□□□□ 0.86
PDLIM7-204ENST00000393546 TRIM49CP0CI26 452 aa20.4■□□□□ 0.86
PDLIM7-204ENST00000393546 GTF2H1P32780 548 aa20.4■□□□□ 0.86
PDLIM7-204ENST00000393546 MTHFRP42898 656 aa20.4■□□□□ 0.86
PDLIM7-204ENST00000393546 NCOA4Q13772 614 aa20.4■□□□□ 0.86
PDLIM7-204ENST00000393546 CYP26C1Q6V0L0 522 aa20.4■□□□□ 0.86
PDLIM7-204ENST00000393546 CCDC149Q6ZUS6 474 aa20.4■□□□□ 0.86
PDLIM7-204ENST00000393546 GPR149Q86SP6 731 aa20.4■□□□□ 0.86
PDLIM7-204ENST00000393546 PDCL2Q8N4E4 241 aa20.4■□□□□ 0.86
PDLIM7-204ENST00000393546 SPATA18Q8TC71 538 aa20.4■□□□□ 0.86
PDLIM7-204ENST00000393546 SUSD6Q92537 303 aa20.4■□□□□ 0.86
PDLIM7-204ENST00000393546 METTL14Q9HCE5 456 aaKnown RBP20.4■□□□□ 0.86
PDLIM7-204ENST00000393546 ZDHHC7Q9NXF8 308 aa20.4■□□□□ 0.86
PDLIM7-204ENST00000393546 ARMCX3Q9UH62 379 aaPredicted RBP20.4■□□□□ 0.86
PDLIM7-204ENST00000393546 AFF4Q9UHB7 1163 aaKnown RBP20.4■□□□□ 0.86
PDLIM7-204ENST00000393546 RWDD2AQ9UIY3 292 aa20.4■□□□□ 0.86
PDLIM7-204ENST00000393546 MAFFQ9ULX9 164 aa20.4■□□□□ 0.86
PDLIM7-204ENST00000393546 L1RE1Q9UN81 338 aa20.4■□□□□ 0.86
PDLIM7-204ENST00000393546 RFPL2O75678 378 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms