RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 RAB34Q9BZG1 259 aa8.01□□□□□ -1.13
VTI1A-201ENST00000393077 CCSER2Q9H7U1 834 aa8.01□□□□□ -1.13
VTI1A-201ENST00000393077 PARVGQ9HBI0 331 aa8.01□□□□□ -1.13
VTI1A-201ENST00000393077 TXNDC16Q9P2K2 825 aa8.01□□□□□ -1.13
VTI1A-201ENST00000393077 SHPRHQ149N8 1683 aa8.01□□□□□ -1.13
VTI1A-201ENST00000393077 ZBED4O75132 1171 aa8.01□□□□□ -1.13
VTI1A-201ENST00000393077 PEX14O75381 377 aa8.01□□□□□ -1.13
VTI1A-201ENST00000393077 CPA3P15088 417 aa8.01□□□□□ -1.13
VTI1A-201ENST00000393077 FECHP22830 423 aa8.01□□□□□ -1.13
VTI1A-201ENST00000393077 VARSP26640 1264 aaKnown RBP8.01□□□□□ -1.13
VTI1A-201ENST00000393077 COPB2P35606 906 aa8.01□□□□□ -1.13
VTI1A-201ENST00000393077 KPNA1P52294 538 aaPredicted RBP8.01□□□□□ -1.13
VTI1A-201ENST00000393077 CSE1LP55060 971 aaKnown RBP8.01□□□□□ -1.13
VTI1A-201ENST00000393077 ARHGAP4P98171 946 aa8.01□□□□□ -1.13
VTI1A-201ENST00000393077 MAPK6Q16659 721 aa8.01□□□□□ -1.13
VTI1A-201ENST00000393077 EDRF1Q3B7T1 1238 aa8.01□□□□□ -1.13
VTI1A-201ENST00000393077 WDR72Q3MJ13 1102 aa8.01□□□□□ -1.13
VTI1A-201ENST00000393077 ARL13BQ3SXY8 428 aa8.01□□□□□ -1.13
VTI1A-201ENST00000393077 CERKLQ49MI3 558 aaPredicted RBP8.01□□□□□ -1.13
VTI1A-201ENST00000393077 FAM83BQ5T0W9 1011 aa8.01□□□□□ -1.13
VTI1A-201ENST00000393077 SV2BQ7L1I2 683 aa8.01□□□□□ -1.13
VTI1A-201ENST00000393077 ASRGL1Q7L266 308 aa8.01□□□□□ -1.13
VTI1A-201ENST00000393077 ZNF572Q7Z3I7 529 aaPredicted RBP8.01□□□□□ -1.13
VTI1A-201ENST00000393077 POU5F2Q8N7G0 328 aa8.01□□□□□ -1.13
VTI1A-201ENST00000393077 GAB3Q8WWW8 586 aa8.01□□□□□ -1.13
VTI1A-201ENST00000393077 ACAP3Q96P50 834 aa8.01□□□□□ -1.13
VTI1A-201ENST00000393077 IMPG2Q9BZV3 1241 aa8.01□□□□□ -1.13
VTI1A-201ENST00000393077 FKBP14Q9NWM8 211 aa8.01□□□□□ -1.13
VTI1A-201ENST00000393077 FAM47E-STBD1D6RA91 191 aa8□□□□□ -1.13
VTI1A-201ENST00000393077 E9PBE3 544 aa8□□□□□ -1.13
VTI1A-201ENST00000393077 CCRL2O00421 344 aa8□□□□□ -1.13
VTI1A-201ENST00000393077 TMCC2O75069 709 aa8□□□□□ -1.13
VTI1A-201ENST00000393077 FARP2O94887 1054 aaPredicted RBP8□□□□□ -1.13
VTI1A-201ENST00000393077 SEMA3DO95025 777 aa8□□□□□ -1.13
VTI1A-201ENST00000393077 EYA4O95677 639 aa8□□□□□ -1.13
VTI1A-201ENST00000393077 HMGB2P26583 209 aaKnown RBP8□□□□□ -1.13
VTI1A-201ENST00000393077 STAT1P42224 750 aa8□□□□□ -1.13
VTI1A-201ENST00000393077 HSPA13P48723 471 aa8□□□□□ -1.13
VTI1A-201ENST00000393077 TPTEP56180 551 aa8□□□□□ -1.13
VTI1A-201ENST00000393077 SCARF1Q14162 830 aa8□□□□□ -1.13
VTI1A-201ENST00000393077 TTLL12Q14166 644 aaPredicted RBP8□□□□□ -1.13
VTI1A-201ENST00000393077 STAT4Q14765 748 aa8□□□□□ -1.13
VTI1A-201ENST00000393077 EXOC3L4Q17RC7 722 aa8□□□□□ -1.13
VTI1A-201ENST00000393077 SGO2Q562F6 1265 aa8□□□□□ -1.13
VTI1A-201ENST00000393077 TLK2Q86UE8 772 aa8□□□□□ -1.13
VTI1A-201ENST00000393077 ANKMY2Q8IV38 441 aa8□□□□□ -1.13
VTI1A-201ENST00000393077 ERI1Q8IV48 349 aaKnown RBP8□□□□□ -1.13
VTI1A-201ENST00000393077 SIX6OS1Q8N1H7 587 aa8□□□□□ -1.13
VTI1A-201ENST00000393077 BBS5Q8N3I7 341 aa8□□□□□ -1.13
VTI1A-201ENST00000393077 IRGQQ8WZA9 623 aa8□□□□□ -1.13
VTI1A-201ENST00000393077 TAMM41Q96BW9 452 aa8□□□□□ -1.13
VTI1A-201ENST00000393077 CADM1Q9BY67 442 aaKnown RBP8□□□□□ -1.13
VTI1A-201ENST00000393077 DISC1Q9NRI5 854 aa8□□□□□ -1.13
VTI1A-201ENST00000393077 ATP8A2Q9NTI2 1148 aa8□□□□□ -1.13
VTI1A-201ENST00000393077 SENP1Q9P0U3 644 aa8□□□□□ -1.13
VTI1A-201ENST00000393077 CPDO75976 1380 aa8□□□□□ -1.13
VTI1A-201ENST00000393077 LINC00854A0A1B0GVQ3 168 aa8□□□□□ -1.13
VTI1A-201ENST00000393077 hCG_1642624A0A1W2PR95 340 aa8□□□□□ -1.13
VTI1A-201ENST00000393077 SIN3BO75182 1162 aa8□□□□□ -1.13
VTI1A-201ENST00000393077 GJC1P36383 396 aa8□□□□□ -1.13
VTI1A-201ENST00000393077 MCAMP43121 646 aa8□□□□□ -1.13
VTI1A-201ENST00000393077 HIRAP54198 1017 aaPredicted RBP8□□□□□ -1.13
VTI1A-201ENST00000393077 FCHO2Q0JRZ9 810 aa8□□□□□ -1.13
VTI1A-201ENST00000393077 ACVR2BQ13705 512 aa8□□□□□ -1.13
VTI1A-201ENST00000393077 TAF12Q16514 161 aa8□□□□□ -1.13
VTI1A-201ENST00000393077 KCTD19Q17RG1 926 aaPredicted RBP8□□□□□ -1.13
VTI1A-201ENST00000393077 DUS1LQ6P1R4 473 aaKnown RBP8□□□□□ -1.13
VTI1A-201ENST00000393077 ATG9AQ7Z3C6 839 aa8□□□□□ -1.13
VTI1A-201ENST00000393077 MCF2L2Q86YR7 1114 aa8□□□□□ -1.13
VTI1A-201ENST00000393077 TCAIMQ8N3R3 496 aa8□□□□□ -1.13
VTI1A-201ENST00000393077 VPS37AQ8NEZ2 397 aa8□□□□□ -1.13
VTI1A-201ENST00000393077 TSPAN14Q8NG11 270 aa8□□□□□ -1.13
VTI1A-201ENST00000393077 TTC25Q96NG3 672 aa8□□□□□ -1.13
VTI1A-201ENST00000393077 NEUROG2Q9H2A3 272 aa8□□□□□ -1.13
VTI1A-201ENST00000393077 STRIP2Q9ULQ0 834 aa8□□□□□ -1.13
VTI1A-201ENST00000393077 CHKBQ9Y259 395 aa8□□□□□ -1.13
VTI1A-201ENST00000393077 V9GY48 417 aaPredicted RBP8□□□□□ -1.13
VTI1A-201ENST00000393077 POTECB2RU33 542 aa8□□□□□ -1.13
VTI1A-201ENST00000393077 CFLARO15519 480 aa8□□□□□ -1.13
VTI1A-201ENST00000393077 RIPK2O43353 540 aa8□□□□□ -1.13
VTI1A-201ENST00000393077 SEC24DO94855 1032 aaPredicted RBP8□□□□□ -1.13
VTI1A-201ENST00000393077 TRIM16O95361 564 aa8□□□□□ -1.13
VTI1A-201ENST00000393077 IREB2P48200 963 aaKnown RBP8□□□□□ -1.13
VTI1A-201ENST00000393077 ALDH18A1P54886 795 aaKnown RBP8□□□□□ -1.13
VTI1A-201ENST00000393077 GSTO1P78417 241 aa8□□□□□ -1.13
VTI1A-201ENST00000393077 RABL6Q3YEC7 729 aaPredicted RBP8□□□□□ -1.13
VTI1A-201ENST00000393077 LPCAT4Q643R3 524 aa8□□□□□ -1.13
VTI1A-201ENST00000393077 TBC1D9BQ66K14 1250 aa8□□□□□ -1.13
VTI1A-201ENST00000393077 LVRNQ6Q4G3 990 aa8□□□□□ -1.13
VTI1A-201ENST00000393077 CCDC81Q6ZN84 652 aa8□□□□□ -1.13
VTI1A-201ENST00000393077 DYMQ7RTS9 669 aa8□□□□□ -1.13
VTI1A-201ENST00000393077 CENPSQ8N2Z9 138 aa8□□□□□ -1.13
VTI1A-201ENST00000393077 SRBD1Q8N5C6 995 aaKnown RBP8□□□□□ -1.13
VTI1A-201ENST00000393077 HELQQ8TDG4 1101 aa8□□□□□ -1.13
VTI1A-201ENST00000393077 FAM136AQ96C01 138 aa8□□□□□ -1.13
VTI1A-201ENST00000393077 INPP4AQ96PE3 977 aaPredicted RBP8□□□□□ -1.13
VTI1A-201ENST00000393077 DEPDC7Q96QD5 511 aa8□□□□□ -1.13
VTI1A-201ENST00000393077 CITED4Q96RK1 184 aa8□□□□□ -1.13
VTI1A-201ENST00000393077 ADAM33Q9BZ11 813 aa8□□□□□ -1.13
VTI1A-201ENST00000393077 WWP1Q9H0M0 922 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms