RNA–Protein interactions for RNA: ENST00000392556.8

TRAF3IP2-208, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-208ENST00000392556 Q4G0T1 1027 aa12.17□□□□□ -0.46
TRAF3IP2-208ENST00000392556 LINC01465Q8N7H1 131 aa12.17□□□□□ -0.46
TRAF3IP2-208ENST00000392556 EIF1ADQ8N9N8 165 aaKnown RBP12.17□□□□□ -0.46
TRAF3IP2-208ENST00000392556 TEKT3Q9BXF9 490 aa12.17□□□□□ -0.46
TRAF3IP2-208ENST00000392556 TMEM117Q9H0C3 514 aa12.17□□□□□ -0.46
TRAF3IP2-208ENST00000392556 ZCWPW1Q9H0M4 648 aa12.17□□□□□ -0.46
TRAF3IP2-208ENST00000392556 TMEM165Q9HC07 324 aa12.17□□□□□ -0.46
TRAF3IP2-208ENST00000392556 DISC1Q9NRI5 854 aa12.17□□□□□ -0.46
TRAF3IP2-208ENST00000392556 GPR32O75388 356 aa12.16□□□□□ -0.46
TRAF3IP2-208ENST00000392556 GSTA2P09210 222 aa12.16□□□□□ -0.46
TRAF3IP2-208ENST00000392556 DESP17661 470 aa12.16□□□□□ -0.46
TRAF3IP2-208ENST00000392556 ATP6V1C1P21283 382 aa12.16□□□□□ -0.46
TRAF3IP2-208ENST00000392556 NDUFV1P49821 464 aa12.16□□□□□ -0.46
TRAF3IP2-208ENST00000392556 PPP2R2AP63151 447 aa12.16□□□□□ -0.46
TRAF3IP2-208ENST00000392556 CAMK1Q14012 370 aa12.16□□□□□ -0.46
TRAF3IP2-208ENST00000392556 DSC3Q14574 896 aa12.16□□□□□ -0.46
TRAF3IP2-208ENST00000392556 ERICH1Q86X53 443 aa12.16□□□□□ -0.46
TRAF3IP2-208ENST00000392556 METTL13Q8N6R0 699 aa12.16□□□□□ -0.46
TRAF3IP2-208ENST00000392556 DAGLBQ8NCG7 672 aa12.16□□□□□ -0.46
TRAF3IP2-208ENST00000392556 SPATA20Q8TB22 786 aa12.16□□□□□ -0.46
TRAF3IP2-208ENST00000392556 C17orf50Q8WW18 174 aa12.16□□□□□ -0.46
TRAF3IP2-208ENST00000392556 SLC5A5Q92911 643 aa12.16□□□□□ -0.46
TRAF3IP2-208ENST00000392556 LENG9Q96B70 501 aa12.16□□□□□ -0.46
TRAF3IP2-208ENST00000392556 SYT15Q9BQS2 421 aa12.16□□□□□ -0.46
TRAF3IP2-208ENST00000392556 VCXQ9H320 206 aa12.16□□□□□ -0.46
TRAF3IP2-208ENST00000392556 ALG13Q9NP73 1137 aaKnown RBP12.16□□□□□ -0.46
TRAF3IP2-208ENST00000392556 C11orf16Q9NQ32 467 aa12.16□□□□□ -0.46
TRAF3IP2-208ENST00000392556 GINS2Q9Y248 185 aa12.16□□□□□ -0.46
TRAF3IP2-208ENST00000392556 WDR37Q9Y2I8 494 aa12.16□□□□□ -0.46
TRAF3IP2-208ENST00000392556 PPME1Q9Y570 386 aa12.16□□□□□ -0.46
TRAF3IP2-208ENST00000392556 BDP1A6H8Y1 2624 aa12.16□□□□□ -0.46
TRAF3IP2-208ENST00000392556 CYP3A7-CYP3A51PA0A087WV96 503 aa12.16□□□□□ -0.46
TRAF3IP2-208ENST00000392556 DKC1O60832 514 aaKnown RBP eCLIP12.16□□□□□ -0.46
TRAF3IP2-208ENST00000392556 GAS7O60861 476 aa12.16□□□□□ -0.46
TRAF3IP2-208ENST00000392556 DEXIO95424 95 aa12.16□□□□□ -0.46
TRAF3IP2-208ENST00000392556 MYZAPP0CAP1 466 aa12.16□□□□□ -0.46
TRAF3IP2-208ENST00000392556 IDEP14735 1019 aa12.16□□□□□ -0.46
TRAF3IP2-208ENST00000392556 SP100P23497 879 aaPredicted RBP12.16□□□□□ -0.46
TRAF3IP2-208ENST00000392556 CYP3A7P24462 503 aa12.16□□□□□ -0.46
TRAF3IP2-208ENST00000392556 ZNF131P52739 623 aa12.16□□□□□ -0.46
TRAF3IP2-208ENST00000392556 NLRP5P59047 1200 aa12.16□□□□□ -0.46
TRAF3IP2-208ENST00000392556 PLCB3Q01970 1234 aa12.16□□□□□ -0.46
TRAF3IP2-208ENST00000392556 SSRP1Q08945 709 aaKnown RBP12.16□□□□□ -0.46
TRAF3IP2-208ENST00000392556 KIF5AQ12840 1032 aa12.16□□□□□ -0.46
TRAF3IP2-208ENST00000392556 SPOUT1Q5T280 376 aaKnown RBP12.16□□□□□ -0.46
TRAF3IP2-208ENST00000392556 PIGWQ7Z7B1 504 aa12.16□□□□□ -0.46
TRAF3IP2-208ENST00000392556 EXOC8Q8IYI6 725 aa12.16□□□□□ -0.46
TRAF3IP2-208ENST00000392556 SYCP3Q8IZU3 236 aa12.16□□□□□ -0.46
TRAF3IP2-208ENST00000392556 PPP1R14BQ96C90 147 aa12.16□□□□□ -0.46
TRAF3IP2-208ENST00000392556 CHMP6Q96FZ7 201 aa12.16□□□□□ -0.46
TRAF3IP2-208ENST00000392556 MSLNLQ96KJ4 702 aa12.16□□□□□ -0.46
TRAF3IP2-208ENST00000392556 SLC26A6Q9BXS9 759 aa12.16□□□□□ -0.46
TRAF3IP2-208ENST00000392556 INO80BQ9C086 356 aaPredicted RBP12.16□□□□□ -0.46
TRAF3IP2-208ENST00000392556 TLR9Q9NR96 1032 aa12.16□□□□□ -0.46
TRAF3IP2-208ENST00000392556 CHST12Q9NRB3 414 aa12.16□□□□□ -0.46
TRAF3IP2-208ENST00000392556 LIMA1Q9UHB6 759 aaKnown RBP12.16□□□□□ -0.46
TRAF3IP2-208ENST00000392556 BRWD1Q9NSI6 2320 aa12.15□□□□□ -0.46
TRAF3IP2-208ENST00000392556 TBKBP1A7MCY6 615 aa12.15□□□□□ -0.46
TRAF3IP2-208ENST00000392556 CPLX1O14810 134 aa12.15□□□□□ -0.46
TRAF3IP2-208ENST00000392556 EOMESO95936 686 aa12.15□□□□□ -0.46
TRAF3IP2-208ENST00000392556 SKIP12755 728 aa12.15□□□□□ -0.46
TRAF3IP2-208ENST00000392556 ATF7P17544 494 aaPredicted RBP12.15□□□□□ -0.46
TRAF3IP2-208ENST00000392556 TCP1P17987 556 aaKnown RBP12.15□□□□□ -0.46
TRAF3IP2-208ENST00000392556 GNAZP19086 355 aa12.15□□□□□ -0.46
TRAF3IP2-208ENST00000392556 EIF4BP23588 611 aaKnown RBP12.15□□□□□ -0.46
TRAF3IP2-208ENST00000392556 MARCKSP29966 332 aaPredicted RBP12.15□□□□□ -0.46
TRAF3IP2-208ENST00000392556 KRT9P35527 623 aa12.15□□□□□ -0.46
TRAF3IP2-208ENST00000392556 KIZQ2M2Z5 673 aa12.15□□□□□ -0.46
TRAF3IP2-208ENST00000392556 TMEM266Q2M3C6 531 aa12.15□□□□□ -0.46
TRAF3IP2-208ENST00000392556 PAN2Q504Q3 1202 aaKnown RBP12.15□□□□□ -0.46
TRAF3IP2-208ENST00000392556 HERC4Q5GLZ8 1057 aaPredicted RBP12.15□□□□□ -0.46
TRAF3IP2-208ENST00000392556 EFCAB12Q6NXP0 572 aa12.15□□□□□ -0.46
TRAF3IP2-208ENST00000392556 KANK3Q6NY19 840 aa12.15□□□□□ -0.46
TRAF3IP2-208ENST00000392556 LRRC43Q8N309 656 aa12.15□□□□□ -0.46
TRAF3IP2-208ENST00000392556 RASGRP4Q8TDF6 673 aa12.15□□□□□ -0.46
TRAF3IP2-208ENST00000392556 TMEM40Q8WWA1 233 aa12.15□□□□□ -0.46
TRAF3IP2-208ENST00000392556 OSMRQ99650 979 aa12.15□□□□□ -0.46
TRAF3IP2-208ENST00000392556 NAP1L4Q99733 375 aaKnown RBP12.15□□□□□ -0.46
TRAF3IP2-208ENST00000392556 MRPL9Q9BYD2 267 aaKnown RBP12.15□□□□□ -0.46
TRAF3IP2-208ENST00000392556 CNOT10Q9H9A5 744 aaKnown RBP12.15□□□□□ -0.46
TRAF3IP2-208ENST00000392556 POLD4Q9HCU8 107 aa12.15□□□□□ -0.46
TRAF3IP2-208ENST00000392556 NGRNQ9NPE2 291 aaKnown RBP12.15□□□□□ -0.46
TRAF3IP2-208ENST00000392556 PCDHA4Q9UN74 947 aa12.15□□□□□ -0.46
TRAF3IP2-208ENST00000392556 AKT3Q9Y243 479 aa12.15□□□□□ -0.46
TRAF3IP2-208ENST00000392556 VCANP13611 3396 aa12.15□□□□□ -0.46
TRAF3IP2-208ENST00000392556 MSH4O15457 936 aa12.15□□□□□ -0.47
TRAF3IP2-208ENST00000392556 MAP3K13O43283 966 aa12.15□□□□□ -0.47
TRAF3IP2-208ENST00000392556 MGEA5O60502 916 aa12.15□□□□□ -0.47
TRAF3IP2-208ENST00000392556 TBX10O75333 385 aa12.15□□□□□ -0.47
TRAF3IP2-208ENST00000392556 ZNF24P17028 368 aa12.15□□□□□ -0.47
TRAF3IP2-208ENST00000392556 DNM2P50570 870 aa12.15□□□□□ -0.47
TRAF3IP2-208ENST00000392556 SLC7A5Q01650 507 aa12.15□□□□□ -0.47
TRAF3IP2-208ENST00000392556 ENOX2Q16206 610 aaKnown RBP12.15□□□□□ -0.47
TRAF3IP2-208ENST00000392556 XKR3Q5GH77 459 aa12.15□□□□□ -0.47
TRAF3IP2-208ENST00000392556 SFMBT2Q5VUG0 894 aa12.15□□□□□ -0.47
TRAF3IP2-208ENST00000392556 TMEM184AQ6ZMB5 413 aa12.15□□□□□ -0.47
TRAF3IP2-208ENST00000392556 ABI1Q8IZP0 508 aa12.15□□□□□ -0.47
TRAF3IP2-208ENST00000392556 COLGALT1Q8NBJ5 622 aa12.15□□□□□ -0.47
TRAF3IP2-208ENST00000392556 SMRP1Q8NCR6 262 aa12.15□□□□□ -0.47
TRAF3IP2-208ENST00000392556 KHSRPQ92945 711 aaKnown RBP eCLIP12.15□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms