RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 INTS13Q9NVM9 706 aa13.67□□□□□ -0.22
GGPS1-203ENST00000391855 CHMP5Q9NZZ3 219 aa13.67□□□□□ -0.22
GGPS1-203ENST00000391855 TSC2P49815 1807 aa13.66□□□□□ -0.22
GGPS1-203ENST00000391855 KPNA7A9QM74 516 aa13.66□□□□□ -0.22
GGPS1-203ENST00000391855 PRRG1O14668 218 aa13.66□□□□□ -0.22
GGPS1-203ENST00000391855 CLIC2O15247 247 aa13.66□□□□□ -0.22
GGPS1-203ENST00000391855 SPTLC1O15269 473 aa13.66□□□□□ -0.22
GGPS1-203ENST00000391855 CALUO43852 315 aaPredicted RBP13.66□□□□□ -0.22
GGPS1-203ENST00000391855 EXOC3O60645 756 aa13.66□□□□□ -0.22
GGPS1-203ENST00000391855 LRG1P02750 347 aa13.66□□□□□ -0.22
GGPS1-203ENST00000391855 ITGB3P05106 788 aa13.66□□□□□ -0.22
GGPS1-203ENST00000391855 POLR2BP30876 1174 aaKnown RBP13.66□□□□□ -0.22
GGPS1-203ENST00000391855 ARPP19P56211 112 aa13.66□□□□□ -0.22
GGPS1-203ENST00000391855 WNT7BP56706 349 aa13.66□□□□□ -0.22
GGPS1-203ENST00000391855 CYP24A1Q07973 514 aa13.66□□□□□ -0.22
GGPS1-203ENST00000391855 DUOXA2Q1HG44 320 aa13.66□□□□□ -0.22
GGPS1-203ENST00000391855 THEM5Q8N1Q8 247 aa13.66□□□□□ -0.22
GGPS1-203ENST00000391855 CGRRF1Q99675 332 aa13.66□□□□□ -0.22
GGPS1-203ENST00000391855 MTMR12Q9C0I1 747 aa13.66□□□□□ -0.22
GGPS1-203ENST00000391855 AGAP1Q9UPQ3 857 aa13.66□□□□□ -0.22
GGPS1-203ENST00000391855 ZFP37Q9Y6Q3 630 aaPredicted RBP13.66□□□□□ -0.22
GGPS1-203ENST00000391855 CYB561D2O14569 222 aa13.65□□□□□ -0.22
GGPS1-203ENST00000391855 SMC2O95347 1197 aa13.65□□□□□ -0.22
GGPS1-203ENST00000391855 AP3M2P53677 418 aa13.65□□□□□ -0.22
GGPS1-203ENST00000391855 SMARCB1Q12824 385 aa13.65□□□□□ -0.22
GGPS1-203ENST00000391855 MYO1EQ12965 1108 aa13.65□□□□□ -0.22
GGPS1-203ENST00000391855 GPR17Q13304 367 aa13.65□□□□□ -0.22
GGPS1-203ENST00000391855 PLD1Q13393 1074 aa13.65□□□□□ -0.22
GGPS1-203ENST00000391855 NFIL3Q16649 462 aa13.65□□□□□ -0.22
GGPS1-203ENST00000391855 PTPN21Q16825 1174 aa13.65□□□□□ -0.22
GGPS1-203ENST00000391855 TMEM31Q5JXX7 168 aa13.65□□□□□ -0.22
GGPS1-203ENST00000391855 ELOA2Q8IYF1 753 aaPredicted RBP13.65□□□□□ -0.22
GGPS1-203ENST00000391855 TMEM86AQ8N2M4 240 aa13.65□□□□□ -0.22
GGPS1-203ENST00000391855 TMEM130Q8N3G9 435 aa13.65□□□□□ -0.22
GGPS1-203ENST00000391855 GUF1Q8N442 669 aaKnown RBP13.65□□□□□ -0.22
GGPS1-203ENST00000391855 ENGASEQ8NFI3 743 aa13.65□□□□□ -0.22
GGPS1-203ENST00000391855 KHSRPQ92945 711 aaKnown RBP eCLIP13.65□□□□□ -0.222e-7■■□□□ 13.3
GGPS1-203ENST00000391855 BORCS6Q96GS4 357 aa13.65□□□□□ -0.22
GGPS1-203ENST00000391855 KCTD10Q9H3F6 313 aa13.65□□□□□ -0.22
GGPS1-203ENST00000391855 EPHX3Q9H6B9 360 aa13.65□□□□□ -0.22
GGPS1-203ENST00000391855 CYP4F11Q9HBI6 524 aa13.65□□□□□ -0.22
GGPS1-203ENST00000391855 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.65□□□□□ -0.22
GGPS1-203ENST00000391855 HSFX1Q9UBD0 423 aa13.65□□□□□ -0.22
GGPS1-203ENST00000391855 MUTYHQ9UIF7 546 aa13.65□□□□□ -0.22
GGPS1-203ENST00000391855 TRAF3IP3Q9Y228 551 aa13.65□□□□□ -0.22
GGPS1-203ENST00000391855 TIMM13Q9Y5L4 95 aaPredicted RBP13.65□□□□□ -0.22
GGPS1-203ENST00000391855 INSL5Q9Y5Q6 135 aa13.65□□□□□ -0.22
GGPS1-203ENST00000391855 TULP1O00294 542 aaPredicted RBP13.64□□□□□ -0.23
GGPS1-203ENST00000391855 CCL16O15467 120 aa13.64□□□□□ -0.23
GGPS1-203ENST00000391855 KINO60870 393 aaKnown RBP13.64□□□□□ -0.23
GGPS1-203ENST00000391855 GPR37L1O60883 481 aa13.64□□□□□ -0.23
GGPS1-203ENST00000391855 HUS1O60921 280 aa13.64□□□□□ -0.23
GGPS1-203ENST00000391855 KRT19P08727 400 aa13.64□□□□□ -0.23
GGPS1-203ENST00000391855 TNNI1P19237 187 aa13.64□□□□□ -0.23
GGPS1-203ENST00000391855 SP100P23497 879 aaPredicted RBP13.64□□□□□ -0.23
GGPS1-203ENST00000391855 FSHRP23945 695 aa13.64□□□□□ -0.23
GGPS1-203ENST00000391855 GBP2P32456 591 aaPredicted RBP13.64□□□□□ -0.23
GGPS1-203ENST00000391855 SNW1Q13573 536 aaKnown RBP13.64□□□□□ -0.23
GGPS1-203ENST00000391855 ELMOD1Q8N336 334 aa13.64□□□□□ -0.23
GGPS1-203ENST00000391855 CSGALNACT2Q8N6G5 542 aa13.64□□□□□ -0.23
GGPS1-203ENST00000391855 C2orf15Q8WU43 125 aaKnown RBP13.64□□□□□ -0.23
GGPS1-203ENST00000391855 MFSD14AQ96MC6 490 aa13.64□□□□□ -0.23
GGPS1-203ENST00000391855 GSDMAQ96QA5 445 aa13.64□□□□□ -0.23
GGPS1-203ENST00000391855 AVENQ9NQS1 362 aaPredicted RBP13.64□□□□□ -0.23
GGPS1-203ENST00000391855 DMAC2Q9NW81 257 aa13.64□□□□□ -0.23
GGPS1-203ENST00000391855 GDAP2Q9NXN4 497 aa13.64□□□□□ -0.23
GGPS1-203ENST00000391855 EPS15L1Q9UBC2 864 aa13.64□□□□□ -0.23
GGPS1-203ENST00000391855 SORCS3Q9UPU3 1222 aa13.64□□□□□ -0.23
GGPS1-203ENST00000391855 VCANP13611 3396 aa13.64□□□□□ -0.23
GGPS1-203ENST00000391855 SCN1AP35498 2009 aa13.64□□□□□ -0.23
GGPS1-203ENST00000391855 HAX1O00165 279 aa13.64□□□□□ -0.23
GGPS1-203ENST00000391855 MAPK13O15264 365 aa13.64□□□□□ -0.23
GGPS1-203ENST00000391855 NR3C1P04150 777 aa13.64□□□□□ -0.23
GGPS1-203ENST00000391855 DLATP10515 647 aaKnown RBP13.64□□□□□ -0.23
GGPS1-203ENST00000391855 RPL13P26373 211 aaKnown RBP13.64□□□□□ -0.23
GGPS1-203ENST00000391855 ENPEPQ07075 957 aa13.64□□□□□ -0.23
GGPS1-203ENST00000391855 ADCY1Q08828 1119 aa13.64□□□□□ -0.23
GGPS1-203ENST00000391855 BFSP1Q12934 665 aa13.64□□□□□ -0.23
GGPS1-203ENST00000391855 MTMR3Q13615 1198 aa13.64□□□□□ -0.23
GGPS1-203ENST00000391855 GET4Q7L5D6 327 aaPredicted RBP13.64□□□□□ -0.23
GGPS1-203ENST00000391855 DPH6Q7L8W6 267 aa13.64□□□□□ -0.23
GGPS1-203ENST00000391855 GRASPQ7Z6J2 395 aaPredicted RBP13.64□□□□□ -0.23
GGPS1-203ENST00000391855 UBALD2Q8IYN6 164 aa13.64□□□□□ -0.23
GGPS1-203ENST00000391855 TOP6BLQ8N6T0 577 aa13.64□□□□□ -0.23
GGPS1-203ENST00000391855 RDH13Q8NBN7 331 aa13.64□□□□□ -0.23
GGPS1-203ENST00000391855 LEMD2Q8NC56 503 aa13.64□□□□□ -0.23
GGPS1-203ENST00000391855 CXorf38Q8TB03 319 aa13.64□□□□□ -0.23
GGPS1-203ENST00000391855 EDAQ92838 391 aa13.64□□□□□ -0.23
GGPS1-203ENST00000391855 NXPE3Q969Y0 559 aa13.64□□□□□ -0.23
GGPS1-203ENST00000391855 CCDC127Q96BQ5 260 aa13.64□□□□□ -0.23
GGPS1-203ENST00000391855 IGSF9Q9P2J2 1179 aa13.64□□□□□ -0.23
GGPS1-203ENST00000391855 SIX4Q9UIU6 781 aa13.64□□□□□ -0.23
GGPS1-203ENST00000391855 POLIQ9UNA4 740 aa13.64□□□□□ -0.23
GGPS1-203ENST00000391855 PTPRJQ12913 1337 aa13.63□□□□□ -0.23
GGPS1-203ENST00000391855 PRR33A8MZF0 331 aa13.63□□□□□ -0.23
GGPS1-203ENST00000391855 STAU1O95793 577 aaKnown RBP13.63□□□□□ -0.23
GGPS1-203ENST00000391855 ZXDAP98168 799 aa13.63□□□□□ -0.23
GGPS1-203ENST00000391855 MYL7Q01449 175 aa13.63□□□□□ -0.23
GGPS1-203ENST00000391855 TSPY1Q01534 308 aa13.63□□□□□ -0.23
GGPS1-203ENST00000391855 PNOCQ13519 176 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms