RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 CDY1Q9Y6F8 540 aa16.89■□□□□ 0.29
SHANK1-204ENST00000391814 ZNF23P17027 643 aa16.89■□□□□ 0.29
SHANK1-204ENST00000391814 RRM2BQ7LG56 351 aa16.89■□□□□ 0.29
SHANK1-204ENST00000391814 ABHD8Q96I13 439 aa16.89■□□□□ 0.29
SHANK1-204ENST00000391814 KIAA1586Q9HCI6 787 aa16.89■□□□□ 0.29
SHANK1-204ENST00000391814 ASAP1Q9ULH1 1129 aa16.89■□□□□ 0.29
SHANK1-204ENST00000391814 ZMYND8Q9ULU4 1186 aaPredicted RBP16.89■□□□□ 0.29
SHANK1-204ENST00000391814 ZBTB5O15062 677 aa16.88■□□□□ 0.29
SHANK1-204ENST00000391814 KCNK10P57789 538 aa16.88■□□□□ 0.29
SHANK1-204ENST00000391814 MRPS26Q9BYN8 205 aaKnown RBP16.88■□□□□ 0.29
SHANK1-204ENST00000391814 XDHP47989 1333 aa16.88■□□□□ 0.29
SHANK1-204ENST00000391814 SUPT3HB4E1H0 165 aa16.88■□□□□ 0.29
SHANK1-204ENST00000391814 USP11P51784 963 aa16.88■□□□□ 0.29
SHANK1-204ENST00000391814 JAK3P52333 1124 aa16.88■□□□□ 0.29
SHANK1-204ENST00000391814 PPIDQ08752 370 aaKnown RBP16.88■□□□□ 0.29
SHANK1-204ENST00000391814 BCORL1Q5H9F3 1711 aa16.88■□□□□ 0.29
SHANK1-204ENST00000391814 ARMCX4Q5H9R4 360 aa16.88■□□□□ 0.29
SHANK1-204ENST00000391814 EFHC2Q5JST6 749 aa16.88■□□□□ 0.29
SHANK1-204ENST00000391814 REXO4Q9GZR2 422 aaKnown RBP16.88■□□□□ 0.29
SHANK1-204ENST00000391814 SP110Q9HB58 689 aa16.88■□□□□ 0.29
SHANK1-204ENST00000391814 GRID1Q9ULK0 1009 aa16.88■□□□□ 0.29
SHANK1-204ENST00000391814 AVPR1AP37288 418 aa16.88■□□□□ 0.29
SHANK1-204ENST00000391814 AASDHQ4L235 1098 aaPredicted RBP16.88■□□□□ 0.29
SHANK1-204ENST00000391814 EFHC1Q5JVL4 640 aa16.88■□□□□ 0.29
SHANK1-204ENST00000391814 C12orf60Q5U649 245 aa16.88■□□□□ 0.29
SHANK1-204ENST00000391814 TMEM47Q9BQJ4 181 aa16.88■□□□□ 0.29
SHANK1-204ENST00000391814 CSADQ9Y600 493 aa16.88■□□□□ 0.29
SHANK1-204ENST00000391814 USP17L10C9JJH3 530 aa16.88■□□□□ 0.29
SHANK1-204ENST00000391814 MAPK10P53779 464 aa16.88■□□□□ 0.29
SHANK1-204ENST00000391814 CCDC149Q6ZUS6 474 aa16.88■□□□□ 0.29
SHANK1-204ENST00000391814 P3H2Q8IVL5 708 aa16.88■□□□□ 0.29
SHANK1-204ENST00000391814 CEP95Q96GE4 821 aa16.88■□□□□ 0.29
SHANK1-204ENST00000391814 FAM210AQ96ND0 272 aa16.88■□□□□ 0.29
SHANK1-204ENST00000391814 AATKQ6ZMQ8 1374 aa16.88■□□□□ 0.29
SHANK1-204ENST00000391814 PODNQ7Z5L7 613 aa16.88■□□□□ 0.29
SHANK1-204ENST00000391814 CENPCQ03188 943 aa16.87■□□□□ 0.29
SHANK1-204ENST00000391814 MTMR1Q13613 665 aa16.87■□□□□ 0.29
SHANK1-204ENST00000391814 NKX1-1Q15270 411 aaPredicted RBP16.87■□□□□ 0.29
SHANK1-204ENST00000391814 PREPLQ4J6C6 727 aaPredicted RBP16.87■□□□□ 0.29
SHANK1-204ENST00000391814 SETD3Q86TU7 594 aaPredicted RBP16.87■□□□□ 0.29
SHANK1-204ENST00000391814 CAVIN3Q969G5 261 aa16.87■□□□□ 0.29
SHANK1-204ENST00000391814 TRIM45Q9H8W5 580 aaPredicted RBP16.87■□□□□ 0.29
SHANK1-204ENST00000391814 TRIM24O15164 1050 aa16.87■□□□□ 0.29
SHANK1-204ENST00000391814 GSNP06396 782 aa16.87■□□□□ 0.29
SHANK1-204ENST00000391814 MYBP10242 640 aa16.87■□□□□ 0.29
SHANK1-204ENST00000391814 BNC2Q6ZN30 1099 aaPredicted RBP16.87■□□□□ 0.29
SHANK1-204ENST00000391814 LRRC39Q96DD0 335 aa16.87■□□□□ 0.29
SHANK1-204ENST00000391814 MYLK2Q9H1R3 596 aa16.87■□□□□ 0.29
SHANK1-204ENST00000391814 UVRAGQ9P2Y5 699 aa16.87■□□□□ 0.29
SHANK1-204ENST00000391814 FSBPO95073 299 aa16.87■□□□□ 0.29
SHANK1-204ENST00000391814 SULT1E1P49888 294 aa16.87■□□□□ 0.29
SHANK1-204ENST00000391814 Q4G0T1 1027 aa16.87■□□□□ 0.29
SHANK1-204ENST00000391814 C7orf25Q9BPX7 421 aa16.87■□□□□ 0.29
SHANK1-204ENST00000391814 MKNK1Q9BUB5 465 aa16.87■□□□□ 0.29
SHANK1-204ENST00000391814 SERPINB13Q9UIV8 391 aa16.87■□□□□ 0.29
SHANK1-204ENST00000391814 ARIH2O95376 493 aa16.87■□□□□ 0.29
SHANK1-204ENST00000391814 ACTR2P61160 394 aa16.87■□□□□ 0.29
SHANK1-204ENST00000391814 EXOSC10Q01780 885 aaKnown RBP16.87■□□□□ 0.29
SHANK1-204ENST00000391814 EPHA10Q5JZY3 1008 aa16.87■□□□□ 0.29
SHANK1-204ENST00000391814 CAPSLQ8WWF8 208 aa16.87■□□□□ 0.29
SHANK1-204ENST00000391814 ATP7AQ04656 1500 aa16.87■□□□□ 0.29
SHANK1-204ENST00000391814 RHOBTB3O94955 611 aa16.87■□□□□ 0.29
SHANK1-204ENST00000391814 EPHB2P29323 1055 aa16.87■□□□□ 0.29
SHANK1-204ENST00000391814 GSTT1P30711 240 aa16.87■□□□□ 0.29
SHANK1-204ENST00000391814 PTK2BQ14289 1009 aa16.87■□□□□ 0.29
SHANK1-204ENST00000391814 MAPRE1Q15691 268 aaKnown RBP16.87■□□□□ 0.29
SHANK1-204ENST00000391814 TCHHL1Q5QJ38 904 aaPredicted RBP16.87■□□□□ 0.29
SHANK1-204ENST00000391814 ANKS1AQ92625 1134 aa16.87■□□□□ 0.29
SHANK1-204ENST00000391814 ANKRD27Q96NW4 1050 aa16.87■□□□□ 0.29
SHANK1-204ENST00000391814 ALDH5A1P51649 535 aaPredicted RBP16.86■□□□□ 0.29
SHANK1-204ENST00000391814 ENOSF1Q7L5Y1 443 aa16.86■□□□□ 0.29
SHANK1-204ENST00000391814 RERGLQ9H628 205 aa16.86■□□□□ 0.29
SHANK1-204ENST00000391814 TPD52L2O43399 206 aaKnown RBP16.86■□□□□ 0.29
SHANK1-204ENST00000391814 PECAM1P16284 738 aaPredicted RBP16.86■□□□□ 0.29
SHANK1-204ENST00000391814 LRRC74AQ0VAA2 488 aa16.86■□□□□ 0.29
SHANK1-204ENST00000391814 ZNF568Q3ZCX4 644 aa16.86■□□□□ 0.29
SHANK1-204ENST00000391814 PDPK2PQ6A1A2 396 aa16.86■□□□□ 0.29
SHANK1-204ENST00000391814 PRUNE1Q86TP1 453 aa16.86■□□□□ 0.29
SHANK1-204ENST00000391814 TNIP2Q8NFZ5 429 aa16.86■□□□□ 0.29
SHANK1-204ENST00000391814 USP13Q92995 863 aaPredicted RBP16.86■□□□□ 0.29
SHANK1-204ENST00000391814 TRIM9Q9C026 710 aa16.86■□□□□ 0.29
SHANK1-204ENST00000391814 ARHGEF38Q9NXL2 777 aa16.86■□□□□ 0.29
SHANK1-204ENST00000391814 BCL10O95999 233 aa16.86■□□□□ 0.29
SHANK1-204ENST00000391814 BGNP21810 368 aa16.86■□□□□ 0.29
SHANK1-204ENST00000391814 INAQ16352 499 aa16.86■□□□□ 0.29
SHANK1-204ENST00000391814 CLEC4GQ6UXB4 293 aa16.86■□□□□ 0.29
SHANK1-204ENST00000391814 PPIL6Q8IXY8 311 aa16.86■□□□□ 0.29
SHANK1-204ENST00000391814 NDUFAF2Q8N183 169 aa16.86■□□□□ 0.29
SHANK1-204ENST00000391814 ACSF2Q96CM8 615 aaPredicted RBP16.86■□□□□ 0.29
SHANK1-204ENST00000391814 POLR3FQ9H1D9 316 aaPredicted RBP16.86■□□□□ 0.29
SHANK1-204ENST00000391814 RMI1Q9H9A7 625 aa16.86■□□□□ 0.29
SHANK1-204ENST00000391814 AQP5P55064 265 aa16.86■□□□□ 0.29
SHANK1-204ENST00000391814 BTBD10Q9BSF8 475 aa16.86■□□□□ 0.29
SHANK1-204ENST00000391814 TMEM165Q9HC07 324 aa16.86■□□□□ 0.29
SHANK1-204ENST00000391814 FAM217BQ9NTX9 383 aaPredicted RBP16.86■□□□□ 0.29
SHANK1-204ENST00000391814 LRFN2Q9ULH4 789 aa16.86■□□□□ 0.29
SHANK1-204ENST00000391814 IPPQ9Y573 584 aa16.86■□□□□ 0.29
SHANK1-204ENST00000391814 RFX7Q2KHR2 1363 aa16.86■□□□□ 0.29
SHANK1-204ENST00000391814 SARSP49591 514 aaKnown RBP16.86■□□□□ 0.29
SHANK1-204ENST00000391814 NME5P56597 212 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms