RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 HNRNPMP52272 730 aaKnown RBP eCLIP4.46□□□□□ -1.7
TRAV40-201ENST00000390467 ADKP55263 362 aaKnown RBP4.46□□□□□ -1.7
TRAV40-201ENST00000390467 NHLH1Q02575 133 aa4.46□□□□□ -1.7
TRAV40-201ENST00000390467 FPGSQ05932 587 aa4.46□□□□□ -1.7
TRAV40-201ENST00000390467 HNRNPA0Q13151 305 aaKnown RBP4.46□□□□□ -1.7
TRAV40-201ENST00000390467 DYRK1AQ13627 763 aa4.46□□□□□ -1.7
TRAV40-201ENST00000390467 CCDC93Q567U6 631 aa4.46□□□□□ -1.7
TRAV40-201ENST00000390467 EFCAB2Q5VUJ9 269 aa4.46□□□□□ -1.7
TRAV40-201ENST00000390467 SLC4A10Q6U841 1118 aa4.46□□□□□ -1.7
TRAV40-201ENST00000390467 ZNF384Q8TF68 577 aa4.46□□□□□ -1.7
TRAV40-201ENST00000390467 FBXL20Q96IG2 436 aa4.46□□□□□ -1.7
TRAV40-201ENST00000390467 SLC13A1Q9BZW2 595 aa4.46□□□□□ -1.7
TRAV40-201ENST00000390467 FRMD4BQ9Y2L6 1034 aa4.46□□□□□ -1.7
TRAV40-201ENST00000390467 MPPED1O15442 326 aa4.45□□□□□ -1.7
TRAV40-201ENST00000390467 CHRM2P08172 466 aa4.45□□□□□ -1.7
TRAV40-201ENST00000390467 FXR1P51114 621 aaKnown RBP eCLIP4.45□□□□□ -1.7
TRAV40-201ENST00000390467 PSMC1P62191 440 aaKnown RBP4.45□□□□□ -1.7
TRAV40-201ENST00000390467 POU6F2P78424 691 aaPredicted RBP4.45□□□□□ -1.7
TRAV40-201ENST00000390467 TXNRD1Q16881 649 aa4.45□□□□□ -1.7
TRAV40-201ENST00000390467 PREPLQ4J6C6 727 aaPredicted RBP4.45□□□□□ -1.7
TRAV40-201ENST00000390467 ZKSCAN2Q63HK3 967 aa4.45□□□□□ -1.7
TRAV40-201ENST00000390467 PPP4R3AQ6IN85 833 aa4.45□□□□□ -1.7
TRAV40-201ENST00000390467 TOR1AIP2Q8NFQ8 470 aa4.45□□□□□ -1.7
TRAV40-201ENST00000390467 SNX19Q92543 992 aa4.45□□□□□ -1.7
TRAV40-201ENST00000390467 C1orf43Q9BWL3 253 aa4.45□□□□□ -1.7
TRAV40-201ENST00000390467 ETAA1Q9NY74 926 aa4.45□□□□□ -1.7
TRAV40-201ENST00000390467 SLC17A6Q9P2U8 582 aa4.45□□□□□ -1.7
TRAV40-201ENST00000390467 ARPP21Q9UBL0 812 aaPredicted RBP4.45□□□□□ -1.7
TRAV40-201ENST00000390467 WASHC2CQ9Y4E1 1318 aa4.45□□□□□ -1.7
TRAV40-201ENST00000390467 LINC00473A8K010 186 aa4.44□□□□□ -1.7
TRAV40-201ENST00000390467 ZNF785A8K8V0 405 aa4.44□□□□□ -1.7
TRAV40-201ENST00000390467 GJB1P08034 283 aa4.44□□□□□ -1.7
TRAV40-201ENST00000390467 RHOP08100 348 aa4.44□□□□□ -1.7
TRAV40-201ENST00000390467 PIGFQ07326 219 aa4.44□□□□□ -1.7
TRAV40-201ENST00000390467 KAZNQ674X7 775 aa4.44□□□□□ -1.7
TRAV40-201ENST00000390467 MICALCLQ6ZW33 695 aa4.44□□□□□ -1.7
TRAV40-201ENST00000390467 TTC7BQ86TV6 843 aa4.44□□□□□ -1.7
TRAV40-201ENST00000390467 NELL1Q92832 810 aa4.44□□□□□ -1.7
TRAV40-201ENST00000390467 UROC1Q96N76 676 aa4.44□□□□□ -1.7
TRAV40-201ENST00000390467 TRIB1Q96RU8 372 aa4.44□□□□□ -1.7
TRAV40-201ENST00000390467 HEPHQ9BQS7 1158 aa4.44□□□□□ -1.7
TRAV40-201ENST00000390467 SMOC2Q9H3U7 446 aa4.44□□□□□ -1.7
TRAV40-201ENST00000390467 AGAP1Q9UPQ3 857 aa4.44□□□□□ -1.7
TRAV40-201ENST00000390467 NEU2Q9Y3R4 380 aa4.44□□□□□ -1.7
TRAV40-201ENST00000390467 WDR27A2RRH5 827 aa4.43□□□□□ -1.7
TRAV40-201ENST00000390467 ALG1L2C9J202 215 aa4.43□□□□□ -1.7
TRAV40-201ENST00000390467 CHRM3P20309 590 aa4.43□□□□□ -1.7
TRAV40-201ENST00000390467 LMO1P25800 156 aa4.43□□□□□ -1.7
TRAV40-201ENST00000390467 GRIA3P42263 894 aa4.43□□□□□ -1.7
TRAV40-201ENST00000390467 PHKA1P46020 1223 aa4.43□□□□□ -1.7
TRAV40-201ENST00000390467 NPTX2P47972 431 aa4.43□□□□□ -1.7
TRAV40-201ENST00000390467 ZNF135P52742 658 aaPredicted RBP4.43□□□□□ -1.7
TRAV40-201ENST00000390467 HLXQ14774 488 aaPredicted RBP4.43□□□□□ -1.7
TRAV40-201ENST00000390467 AKNAD1Q5T1N1 836 aa4.43□□□□□ -1.7
TRAV40-201ENST00000390467 SLC30A10Q6XR72 485 aa4.43□□□□□ -1.7
TRAV40-201ENST00000390467 PDSS2Q86YH6 399 aa4.43□□□□□ -1.7
TRAV40-201ENST00000390467 POC1BQ8TC44 478 aa4.43□□□□□ -1.7
TRAV40-201ENST00000390467 SCAMP4Q969E2 229 aa4.43□□□□□ -1.7
TRAV40-201ENST00000390467 SMOQ99835 787 aa4.43□□□□□ -1.7
TRAV40-201ENST00000390467 SLAMF7Q9NQ25 335 aa4.43□□□□□ -1.7
TRAV40-201ENST00000390467 ADAM21Q9UKJ8 722 aa4.43□□□□□ -1.7
TRAV40-201ENST00000390467 ENTPD2Q9Y5L3 495 aa4.43□□□□□ -1.7
TRAV40-201ENST00000390467 COL4A3BPQ9Y5P4 624 aa4.43□□□□□ -1.7
TRAV40-201ENST00000390467 ADGRA2Q96PE1 1338 aa4.43□□□□□ -1.7
TRAV40-201ENST00000390467 WIPF3A6NGB9 483 aa4.42□□□□□ -1.7
TRAV40-201ENST00000390467 E7ENX8 843 aa4.42□□□□□ -1.7
TRAV40-201ENST00000390467 POLRMTO00411 1230 aaKnown RBP4.42□□□□□ -1.7
TRAV40-201ENST00000390467 ANXA1P04083 346 aa4.42□□□□□ -1.7
TRAV40-201ENST00000390467 ITPKBP27987 946 aa4.42□□□□□ -1.7
TRAV40-201ENST00000390467 PRDX5P30044 214 aa4.42□□□□□ -1.7
TRAV40-201ENST00000390467 TAP2Q03519 686 aa4.42□□□□□ -1.7
TRAV40-201ENST00000390467 FOXF2Q12947 444 aa4.42□□□□□ -1.7
TRAV40-201ENST00000390467 NOGQ13253 232 aa4.42□□□□□ -1.7
TRAV40-201ENST00000390467 PTPRRQ15256 657 aa4.42□□□□□ -1.7
TRAV40-201ENST00000390467 NBPF8Q3BBV2 869 aa4.42□□□□□ -1.7
TRAV40-201ENST00000390467 TSTD2Q5T7W7 516 aa4.42□□□□□ -1.7
TRAV40-201ENST00000390467 ZNF788Q6ZQV5 615 aa4.42□□□□□ -1.7
TRAV40-201ENST00000390467 CATIPQ7Z7H3 387 aa4.42□□□□□ -1.7
TRAV40-201ENST00000390467 AMIGO2Q86SJ2 522 aa4.42□□□□□ -1.7
TRAV40-201ENST00000390467 FAM90A1Q86YD7 464 aa4.42□□□□□ -1.7
TRAV40-201ENST00000390467 FAM9AQ8IZU1 332 aaPredicted RBP4.42□□□□□ -1.7
TRAV40-201ENST00000390467 B3GALNT2Q8NCR0 500 aa4.42□□□□□ -1.7
TRAV40-201ENST00000390467 PSD4Q8NDX1 1056 aa4.42□□□□□ -1.7
TRAV40-201ENST00000390467 SARAFQ96BY9 339 aa4.42□□□□□ -1.7
TRAV40-201ENST00000390467 PGBD1Q96JS3 809 aa4.42□□□□□ -1.7
TRAV40-201ENST00000390467 TIMP4Q99727 224 aa4.42□□□□□ -1.7
TRAV40-201ENST00000390467 BRD9Q9H8M2 597 aa4.42□□□□□ -1.7
TRAV40-201ENST00000390467 GPR35Q9HC97 309 aa4.42□□□□□ -1.7
TRAV40-201ENST00000390467 CPNE5Q9HCH3 593 aa4.42□□□□□ -1.7
TRAV40-201ENST00000390467 PCDH12Q9NPG4 1184 aa4.42□□□□□ -1.7
TRAV40-201ENST00000390467 RLIMQ9NVW2 624 aa4.42□□□□□ -1.7
TRAV40-201ENST00000390467 SIDT1Q9NXL6 827 aaKnown RBP4.42□□□□□ -1.7
TRAV40-201ENST00000390467 ST3GAL5Q9UNP4 418 aa4.42□□□□□ -1.7
TRAV40-201ENST00000390467 PCDHA3Q9Y5H8 950 aa4.42□□□□□ -1.7
TRAV40-201ENST00000390467 A0A0B4J269 797 aa4.41□□□□□ -1.7
TRAV40-201ENST00000390467 CCDC151A5D8V7 595 aa4.41□□□□□ -1.7
TRAV40-201ENST00000390467 CGB1A6NKQ9 187 aa4.41□□□□□ -1.7
TRAV40-201ENST00000390467 WT1P19544 449 aaPredicted RBP4.41□□□□□ -1.7
TRAV40-201ENST00000390467 PCSK6P29122 969 aa4.41□□□□□ -1.7
TRAV40-201ENST00000390467 CYP2C19P33261 490 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms