RNA–Protein interactions for RNA: ENST00000389134.9

CNEP1R1-201, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 3

Gene CNEP1R1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-201ENST00000389134 DNAJC25Q9H1X3 360 aa23.31■■□□□ 1.32
CNEP1R1-201ENST00000389134 RALYQ9UKM9 306 aaKnown RBP23.31■■□□□ 1.32
CNEP1R1-201ENST00000389134 ASPMQ8IZT6 3477 aa23.31■■□□□ 1.32
CNEP1R1-201ENST00000389134 ABCA7Q8IZY2 2146 aa23.3■■□□□ 1.32
CNEP1R1-201ENST00000389134 M0QZQ0 153 aa23.3■■□□□ 1.32
CNEP1R1-201ENST00000389134 AKAP3O75969 853 aa23.3■■□□□ 1.32
CNEP1R1-201ENST00000389134 VNN2O95498 520 aa23.3■■□□□ 1.32
CNEP1R1-201ENST00000389134 OR52Z1P0C646 297 aa23.3■■□□□ 1.32
CNEP1R1-201ENST00000389134 CCDC192P0DO97 292 aa23.3■■□□□ 1.32
CNEP1R1-201ENST00000389134 HOXC13P31276 330 aa23.3■■□□□ 1.32
CNEP1R1-201ENST00000389134 PEX3P56589 373 aa23.3■■□□□ 1.32
CNEP1R1-201ENST00000389134 DUSP4Q13115 394 aa23.3■■□□□ 1.32
CNEP1R1-201ENST00000389134 GPR17Q13304 367 aa23.3■■□□□ 1.32
CNEP1R1-201ENST00000389134 DMP1Q13316 513 aaPredicted RBP23.3■■□□□ 1.32
CNEP1R1-201ENST00000389134 PTPAQ15257 358 aa23.3■■□□□ 1.32
CNEP1R1-201ENST00000389134 STXBP5Q5T5C0 1151 aa23.3■■□□□ 1.32
CNEP1R1-201ENST00000389134 KBTBD6Q86V97 674 aa23.3■■□□□ 1.32
CNEP1R1-201ENST00000389134 PGLYRP2Q96PD5 576 aa23.3■■□□□ 1.32
CNEP1R1-201ENST00000389134 MKNK1Q9BUB5 465 aa23.3■■□□□ 1.32
CNEP1R1-201ENST00000389134 ARHGAP28Q9P2N2 729 aa23.3■■□□□ 1.32
CNEP1R1-201ENST00000389134 RBM19Q9Y4C8 960 aaKnown RBP23.3■■□□□ 1.32
CNEP1R1-201ENST00000389134 OR6C75A6NL08 312 aa23.29■■□□□ 1.32
CNEP1R1-201ENST00000389134 ABLIM1O14639 778 aa23.29■■□□□ 1.32
CNEP1R1-201ENST00000389134 EXTL3O43909 919 aa23.29■■□□□ 1.32
CNEP1R1-201ENST00000389134 ATG13O75143 517 aa23.29■■□□□ 1.32
CNEP1R1-201ENST00000389134 WEE1P30291 646 aa23.29■■□□□ 1.32
CNEP1R1-201ENST00000389134 CCT6AP40227 531 aaKnown RBP23.29■■□□□ 1.32
CNEP1R1-201ENST00000389134 ORC2Q13416 577 aaPredicted RBP23.29■■□□□ 1.32
CNEP1R1-201ENST00000389134 ARHGAP15Q53QZ3 475 aa23.29■■□□□ 1.32
CNEP1R1-201ENST00000389134 GAREM2Q75VX8 874 aa23.29■■□□□ 1.32
CNEP1R1-201ENST00000389134 TAS1R3Q7RTX0 852 aa23.29■■□□□ 1.32
CNEP1R1-201ENST00000389134 BPIFB1Q8TDL5 484 aa23.29■■□□□ 1.32
CNEP1R1-201ENST00000389134 ZC3H10Q96K80 434 aaKnown RBP23.29■■□□□ 1.32
CNEP1R1-201ENST00000389134 ATXN3LQ9H3M9 355 aa23.29■■□□□ 1.32
CNEP1R1-201ENST00000389134 ECM1Q16610 540 aa23.28■■□□□ 1.32
CNEP1R1-201ENST00000389134 SLC10A6Q3KNW5 377 aa23.28■■□□□ 1.32
CNEP1R1-201ENST00000389134 ITPRIPL2Q3MIP1 535 aa23.28■■□□□ 1.32
CNEP1R1-201ENST00000389134 GPR158Q5T848 1215 aa23.28■■□□□ 1.32
CNEP1R1-201ENST00000389134 CENPPQ6IPU0 288 aa23.28■■□□□ 1.32
CNEP1R1-201ENST00000389134 DNAJB7Q7Z6W7 309 aaPredicted RBP23.28■■□□□ 1.32
CNEP1R1-201ENST00000389134 USP37Q86T82 979 aa23.28■■□□□ 1.32
CNEP1R1-201ENST00000389134 PSMG2Q969U7 264 aa23.28■■□□□ 1.32
CNEP1R1-201ENST00000389134 TMEM209Q96SK2 561 aa23.28■■□□□ 1.32
CNEP1R1-201ENST00000389134 CRISPLD1Q9H336 500 aa23.28■■□□□ 1.32
CNEP1R1-201ENST00000389134 KMT5AQ9NQR1 393 aa23.28■■□□□ 1.32
CNEP1R1-201ENST00000389134 SH2B1Q9NRF2 756 aaPredicted RBP23.28■■□□□ 1.32
CNEP1R1-201ENST00000389134 VPS45Q9NRW7 570 aa23.28■■□□□ 1.32
CNEP1R1-201ENST00000389134 THG1LQ9NWX6 298 aaKnown RBP23.28■■□□□ 1.32
CNEP1R1-201ENST00000389134 SLC8A2Q9UPR5 921 aa23.28■■□□□ 1.32
CNEP1R1-201ENST00000389134 KIAA1024Q9UPX6 916 aa23.28■■□□□ 1.32
CNEP1R1-201ENST00000389134 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.28■■□□□ 1.32
CNEP1R1-201ENST00000389134 PCNX2A6NKB5 2137 aa23.27■■□□□ 1.32
CNEP1R1-201ENST00000389134 THADAQ6YHU6 1953 aa23.27■■□□□ 1.32
CNEP1R1-201ENST00000389134 MEFVO15553 781 aaPredicted RBP23.27■■□□□ 1.32
CNEP1R1-201ENST00000389134 OR4Q2P0C623 313 aa23.27■■□□□ 1.32
CNEP1R1-201ENST00000389134 HARSP12081 509 aaKnown RBP23.27■■□□□ 1.32
CNEP1R1-201ENST00000389134 MPLP40238 635 aa23.27■■□□□ 1.32
CNEP1R1-201ENST00000389134 PXNP49023 591 aaPredicted RBP23.27■■□□□ 1.32
CNEP1R1-201ENST00000389134 TNK2Q07912 1038 aa23.27■■□□□ 1.32
CNEP1R1-201ENST00000389134 RNF43Q68DV7 783 aa23.27■■□□□ 1.32
CNEP1R1-201ENST00000389134 ITIH5Q86UX2 942 aa23.27■■□□□ 1.32
CNEP1R1-201ENST00000389134 NECAB1Q8N987 351 aa23.27■■□□□ 1.32
CNEP1R1-201ENST00000389134 GTF3C6Q969F1 213 aa23.27■■□□□ 1.32
CNEP1R1-201ENST00000389134 TUBGCP4Q9UGJ1 667 aa23.27■■□□□ 1.32
CNEP1R1-201ENST00000389134 ANKRD11Q6UB99 2663 aaPredicted RBP23.26■■□□□ 1.31
CNEP1R1-201ENST00000389134 GABRR2P28476 465 aa23.26■■□□□ 1.31
CNEP1R1-201ENST00000389134 LRPAP1P30533 357 aa23.26■■□□□ 1.31
CNEP1R1-201ENST00000389134 FOSBP53539 338 aa23.26■■□□□ 1.31
CNEP1R1-201ENST00000389134 CACNB1Q02641 598 aaPredicted RBP23.26■■□□□ 1.31
CNEP1R1-201ENST00000389134 GRSF1Q12849 480 aaKnown RBP eCLIP23.26■■□□□ 1.31
CNEP1R1-201ENST00000389134 MYBPC2Q14324 1141 aa23.26■■□□□ 1.31
CNEP1R1-201ENST00000389134 NOLC1Q14978 699 aaKnown RBP eCLIP23.26■■□□□ 1.31
CNEP1R1-201ENST00000389134 SAFBQ15424 915 aaKnown RBP eCLIP23.26■■□□□ 1.31
CNEP1R1-201ENST00000389134 ZNF174Q15697 407 aa23.26■■□□□ 1.31
CNEP1R1-201ENST00000389134 PSAPL1Q6NUJ1 521 aa23.26■■□□□ 1.31
CNEP1R1-201ENST00000389134 NSUN7Q8NE18 718 aaKnown RBP23.26■■□□□ 1.31
CNEP1R1-201ENST00000389134 DRC1Q96MC2 740 aa23.26■■□□□ 1.31
CNEP1R1-201ENST00000389134 TASP1Q9H6P5 420 aa23.26■■□□□ 1.31
CNEP1R1-201ENST00000389134 C17orf75Q9HAS0 396 aa23.26■■□□□ 1.31
CNEP1R1-201ENST00000389134 PLEKHA5Q9HAU0 1116 aa23.26■■□□□ 1.31
CNEP1R1-201ENST00000389134 SLC27A5Q9Y2P5 690 aa23.26■■□□□ 1.31
CNEP1R1-201ENST00000389134 TIMM13Q9Y5L4 95 aaPredicted RBP23.26■■□□□ 1.31
CNEP1R1-201ENST00000389134 STK24Q9Y6E0 443 aa23.26■■□□□ 1.31
CNEP1R1-201ENST00000389134 ASCC3Q8N3C0 2202 aaKnown RBP23.25■■□□□ 1.31
CNEP1R1-201ENST00000389134 PI4KAP42356 2102 aa23.25■■□□□ 1.31
CNEP1R1-201ENST00000389134 AARSP49588 968 aaKnown RBP eCLIP23.25■■□□□ 1.31
CNEP1R1-201ENST00000389134 MCM2P49736 904 aa23.25■■□□□ 1.31
CNEP1R1-201ENST00000389134 PKN3Q6P5Z2 889 aa23.25■■□□□ 1.31
CNEP1R1-201ENST00000389134 CAMKK1Q8N5S9 505 aa23.25■■□□□ 1.31
CNEP1R1-201ENST00000389134 ZBTB45Q96K62 511 aaPredicted RBP23.25■■□□□ 1.31
CNEP1R1-201ENST00000389134 DDX19AQ9NUU7 478 aaKnown RBP23.25■■□□□ 1.31
CNEP1R1-201ENST00000389134 HSFX1Q9UBD0 423 aa23.25■■□□□ 1.31
CNEP1R1-201ENST00000389134 GON4LQ3T8J9 2241 aa23.24■■□□□ 1.31
CNEP1R1-201ENST00000389134 MTMR11A4FU01 709 aa23.24■■□□□ 1.31
CNEP1R1-201ENST00000389134 HIP1RO75146 1068 aa23.24■■□□□ 1.31
CNEP1R1-201ENST00000389134 TOM1L1O75674 476 aa23.24■■□□□ 1.31
CNEP1R1-201ENST00000389134 PRAMEF12O95522 483 aa23.24■■□□□ 1.31
CNEP1R1-201ENST00000389134 FXR2P51116 673 aaKnown RBP eCLIP23.24■■□□□ 1.31
CNEP1R1-201ENST00000389134 TMEM196Q5HYL7 178 aa23.24■■□□□ 1.31
CNEP1R1-201ENST00000389134 DSTYKQ6XUX3 929 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms