RNA–Protein interactions for RNA: ENST00000383861.1

RNU1-28P-201, Transcript of RNA, U1 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU1-28P, Length 164 nt, Biotype snRNA, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-28P-201ENST00000383861 PTPN14Q15678 1187 aa9.45□□□□□ -0.9
RNU1-28P-201ENST00000383861 CCDC122Q5T0U0 273 aa9.45□□□□□ -0.9
RNU1-28P-201ENST00000383861 DCLRE1AQ6PJP8 1040 aa9.45□□□□□ -0.9
RNU1-28P-201ENST00000383861 DEFB128Q7Z7B8 93 aa9.45□□□□□ -0.9
RNU1-28P-201ENST00000383861 SLC47A2Q86VL8 602 aa9.45□□□□□ -0.9
RNU1-28P-201ENST00000383861 TMEM86AQ8N2M4 240 aa9.45□□□□□ -0.9
RNU1-28P-201ENST00000383861 APPL2Q8NEU8 664 aa9.45□□□□□ -0.9
RNU1-28P-201ENST00000383861 SLC30A5Q8TAD4 765 aa9.45□□□□□ -0.9
RNU1-28P-201ENST00000383861 LINC01599Q8WXQ3 324 aa9.45□□□□□ -0.9
RNU1-28P-201ENST00000383861 TMEM176AQ96HP8 235 aa9.45□□□□□ -0.9
RNU1-28P-201ENST00000383861 FAM84AQ96KN4 292 aa9.45□□□□□ -0.9
RNU1-28P-201ENST00000383861 PPP1R13BQ96KQ4 1090 aa9.45□□□□□ -0.9
RNU1-28P-201ENST00000383861 ARID3AQ99856 593 aa9.45□□□□□ -0.9
RNU1-28P-201ENST00000383861 DESI2Q9BSY9 194 aa9.45□□□□□ -0.9
RNU1-28P-201ENST00000383861 SYT11Q9BT88 431 aa9.45□□□□□ -0.9
RNU1-28P-201ENST00000383861 HTATIP2Q9BUP3 242 aa9.45□□□□□ -0.9
RNU1-28P-201ENST00000383861 NT5C1AQ9BXI3 368 aa9.45□□□□□ -0.9
RNU1-28P-201ENST00000383861 ZNF518BQ9C0D4 1074 aa9.45□□□□□ -0.9
RNU1-28P-201ENST00000383861 PRDM5Q9NQX1 630 aaPredicted RBP9.45□□□□□ -0.9
RNU1-28P-201ENST00000383861 MIOSQ9NXC5 875 aa9.45□□□□□ -0.9
RNU1-28P-201ENST00000383861 TRMT1Q9NXH9 659 aaKnown RBP9.45□□□□□ -0.9
RNU1-28P-201ENST00000383861 MYO1AQ9UBC5 1043 aa9.45□□□□□ -0.9
RNU1-28P-201ENST00000383861 NAGPAQ9UK23 515 aa9.45□□□□□ -0.9
RNU1-28P-201ENST00000383861 DSEQ9UL01 958 aa9.45□□□□□ -0.9
RNU1-28P-201ENST00000383861 POLIQ9UNA4 740 aa9.45□□□□□ -0.9
RNU1-28P-201ENST00000383861 INPP5FQ9Y2H2 1132 aa9.45□□□□□ -0.9
RNU1-28P-201ENST00000383861 CEP83Q9Y592 693 aa9.45□□□□□ -0.9
RNU1-28P-201ENST00000383861 MEIS3P2A8K0S8 358 aa9.44□□□□□ -0.9
RNU1-28P-201ENST00000383861 BTNL10A8MVZ5 291 aa9.44□□□□□ -0.9
RNU1-28P-201ENST00000383861 TMEM189-UBE2V1I3L0A0 370 aa9.44□□□□□ -0.9
RNU1-28P-201ENST00000383861 DDX3XO00571 662 aaKnown RBP eCLIP9.44□□□□□ -0.9
RNU1-28P-201ENST00000383861 PJA2O43164 708 aa9.44□□□□□ -0.9
RNU1-28P-201ENST00000383861 TRAPPC3O43617 180 aa9.44□□□□□ -0.9
RNU1-28P-201ENST00000383861 KIF5CO60282 957 aa9.44□□□□□ -0.9
RNU1-28P-201ENST00000383861 RTN2O75298 545 aa9.44□□□□□ -0.9
RNU1-28P-201ENST00000383861 LSM8O95777 96 aaKnown RBP9.44□□□□□ -0.9
RNU1-28P-201ENST00000383861 POMCP01189 267 aa9.44□□□□□ -0.9
RNU1-28P-201ENST00000383861 AMHP03971 560 aa9.44□□□□□ -0.9
RNU1-28P-201ENST00000383861 H2AFZP0C0S5 128 aa9.44□□□□□ -0.9
RNU1-28P-201ENST00000383861 PNMA6AP0CW24 399 aaPredicted RBP9.44□□□□□ -0.9
RNU1-28P-201ENST00000383861 VDRP11473 427 aa9.44□□□□□ -0.9
RNU1-28P-201ENST00000383861 CD58P19256 250 aa9.44□□□□□ -0.9
RNU1-28P-201ENST00000383861 EN2P19622 333 aaPredicted RBP9.44□□□□□ -0.9
RNU1-28P-201ENST00000383861 LHX1P48742 406 aa9.44□□□□□ -0.9
RNU1-28P-201ENST00000383861 GFPT1Q06210 699 aaPredicted RBP9.44□□□□□ -0.9
RNU1-28P-201ENST00000383861 SOX4Q06945 474 aaPredicted RBP9.44□□□□□ -0.9
RNU1-28P-201ENST00000383861 PPIGQ13427 754 aaKnown RBP eCLIP9.44□□□□□ -0.9
RNU1-28P-201ENST00000383861 IFI16Q16666 785 aaKnown RBP9.44□□□□□ -0.9
RNU1-28P-201ENST00000383861 UPP1Q16831 310 aa9.44□□□□□ -0.9
RNU1-28P-201ENST00000383861 DSTYKQ6XUX3 929 aa9.44□□□□□ -0.9
RNU1-28P-201ENST00000383861 SCARA5Q6ZMJ2 495 aa9.44□□□□□ -0.9
RNU1-28P-201ENST00000383861 H2AFVQ71UI9 128 aa9.44□□□□□ -0.9
RNU1-28P-201ENST00000383861 LIMS2Q7Z4I7 341 aa9.44□□□□□ -0.9
RNU1-28P-201ENST00000383861 NOP9Q86U38 636 aaKnown RBP9.44□□□□□ -0.9
RNU1-28P-201ENST00000383861 METTL23Q86XA0 190 aa9.44□□□□□ -0.9
RNU1-28P-201ENST00000383861 GLYCTKQ8IVS8 523 aa9.44□□□□□ -0.9
RNU1-28P-201ENST00000383861 REXO1L1PQ8IX06 675 aa9.44□□□□□ -0.9
RNU1-28P-201ENST00000383861 RNF10Q8N5U6 811 aaKnown RBP9.44□□□□□ -0.9
RNU1-28P-201ENST00000383861 ACRBPQ8NEB7 543 aa9.44□□□□□ -0.9
RNU1-28P-201ENST00000383861 TRIM11Q96F44 468 aa9.44□□□□□ -0.9
RNU1-28P-201ENST00000383861 TNIP3Q96KP6 325 aa9.44□□□□□ -0.9
RNU1-28P-201ENST00000383861 CXCL16Q9H2A7 254 aa9.44□□□□□ -0.9
RNU1-28P-201ENST00000383861 SNX25Q9H3E2 840 aa9.44□□□□□ -0.9
RNU1-28P-201ENST00000383861 SEPT11Q9NVA2 429 aaKnown RBP9.44□□□□□ -0.9
RNU1-28P-201ENST00000383861 NOCTQ9UK39 431 aaKnown RBP9.44□□□□□ -0.9
RNU1-28P-201ENST00000383861 ANK1P16157 1881 aa9.44□□□□□ -0.9
RNU1-28P-201ENST00000383861 CITO14578 2027 aa9.44□□□□□ -0.9
RNU1-28P-201ENST00000383861 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.43□□□□□ -0.9
RNU1-28P-201ENST00000383861 ANKRD62A6NC57 917 aa9.43□□□□□ -0.9
RNU1-28P-201ENST00000383861 TRIM43BA6NCK2 446 aa9.43□□□□□ -0.9
RNU1-28P-201ENST00000383861 CYB561D2O14569 222 aa9.43□□□□□ -0.9
RNU1-28P-201ENST00000383861 THAP12O43422 761 aa9.43□□□□□ -0.9
RNU1-28P-201ENST00000383861 B3GAT3O94766 335 aa9.43□□□□□ -0.9
RNU1-28P-201ENST00000383861 ALDH2P05091 517 aa9.43□□□□□ -0.9
RNU1-28P-201ENST00000383861 ODC1P11926 461 aa9.43□□□□□ -0.9
RNU1-28P-201ENST00000383861 IBSPP21815 317 aaPredicted RBP9.43□□□□□ -0.9
RNU1-28P-201ENST00000383861 WARSP23381 471 aaKnown RBP9.43□□□□□ -0.9
RNU1-28P-201ENST00000383861 GNL1P36915 607 aaPredicted RBP9.43□□□□□ -0.9
RNU1-28P-201ENST00000383861 AARSP49588 968 aaKnown RBP eCLIP9.43□□□□□ -0.9
RNU1-28P-201ENST00000383861 CLCNKBP51801 687 aa9.43□□□□□ -0.9
RNU1-28P-201ENST00000383861 RAD23BP54727 409 aa9.43□□□□□ -0.9
RNU1-28P-201ENST00000383861 FMO1Q01740 532 aa9.43□□□□□ -0.9
RNU1-28P-201ENST00000383861 CYP27A1Q02318 531 aa9.43□□□□□ -0.9
RNU1-28P-201ENST00000383861 DSC1Q08554 894 aa9.43□□□□□ -0.9
RNU1-28P-201ENST00000383861 SOWAHAQ2M3V2 549 aa9.43□□□□□ -0.9
RNU1-28P-201ENST00000383861 SGO2Q562F6 1265 aa9.43□□□□□ -0.9
RNU1-28P-201ENST00000383861 CLLU1OSQ5K130 101 aa9.43□□□□□ -0.9
RNU1-28P-201ENST00000383861 ADGRF2Q8IZF7 708 aa9.43□□□□□ -0.9
RNU1-28P-201ENST00000383861 MSANTD4Q8NCY6 345 aa9.43□□□□□ -0.9
RNU1-28P-201ENST00000383861 OR6B3Q8NGW1 331 aa9.43□□□□□ -0.9
RNU1-28P-201ENST00000383861 LNX1Q8TBB1 728 aaPredicted RBP9.43□□□□□ -0.9
RNU1-28P-201ENST00000383861 UBE2Q2Q8WVN8 375 aa9.43□□□□□ -0.9
RNU1-28P-201ENST00000383861 ZNF606Q8WXB4 792 aa9.43□□□□□ -0.9
RNU1-28P-201ENST00000383861 CTNNBL1Q8WYA6 563 aaPredicted RBP9.43□□□□□ -0.9
RNU1-28P-201ENST00000383861 DDX1Q92499 740 aaKnown RBP9.43□□□□□ -0.9
RNU1-28P-201ENST00000383861 ELMO3Q96BJ8 720 aa9.43□□□□□ -0.9
RNU1-28P-201ENST00000383861 TRIM43Q96BQ3 446 aaPredicted RBP9.43□□□□□ -0.9
RNU1-28P-201ENST00000383861 VCPIP1Q96JH7 1222 aa9.43□□□□□ -0.9
RNU1-28P-201ENST00000383861 HEXIM2Q96MH2 286 aaKnown RBP9.43□□□□□ -0.9
RNU1-28P-201ENST00000383861 TMEM175Q9BSA9 504 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms