RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 EFTUD2Q15029 972 aaKnown RBP eCLIP15.8■□□□□ 0.12
CTNS-202ENST00000381870 ASPRV1Q53RT3 343 aa15.8■□□□□ 0.12
CTNS-202ENST00000381870 PPP1R18Q6NYC8 613 aa15.8■□□□□ 0.12
CTNS-202ENST00000381870 GSTA5Q7RTV2 222 aa15.8■□□□□ 0.12
CTNS-202ENST00000381870 ANKS1BQ7Z6G8 1248 aa15.8■□□□□ 0.12
CTNS-202ENST00000381870 SCUBE1Q8IWY4 988 aa15.8■□□□□ 0.12
CTNS-202ENST00000381870 SLFN12Q8IYM2 578 aa15.8■□□□□ 0.12
CTNS-202ENST00000381870 ARHGAP24Q8N264 748 aa15.8■□□□□ 0.12
CTNS-202ENST00000381870 BBOF1Q8ND07 529 aa15.8■□□□□ 0.12
CTNS-202ENST00000381870 RBM15BQ8NDT2 890 aaKnown RBP15.8■□□□□ 0.12
CTNS-202ENST00000381870 ERMNQ8TAM6 284 aa15.8■□□□□ 0.12
CTNS-202ENST00000381870 SHKBP1Q8TBC3 707 aa15.8■□□□□ 0.12
CTNS-202ENST00000381870 ETNPPLQ8TBG4 499 aa15.8■□□□□ 0.12
CTNS-202ENST00000381870 CCDC110Q8TBZ0 833 aa15.8■□□□□ 0.12
CTNS-202ENST00000381870 GTF3C4Q9UKN8 822 aa15.8■□□□□ 0.12
CTNS-202ENST00000381870 ZNF232Q9UNY5 417 aa15.8■□□□□ 0.12
CTNS-202ENST00000381870 DDX60LQ5H9U9 1706 aaKnown RBP15.8■□□□□ 0.12
CTNS-202ENST00000381870 USP17L10C9JJH3 530 aa15.8■□□□□ 0.12
CTNS-202ENST00000381870 MAGEC1O60732 1142 aa15.8■□□□□ 0.12
CTNS-202ENST00000381870 BANF1O75531 89 aa15.8■□□□□ 0.12
CTNS-202ENST00000381870 FAM13AO94988 1023 aa15.8■□□□□ 0.12
CTNS-202ENST00000381870 ENO1P06733 434 aaKnown RBP15.8■□□□□ 0.12
CTNS-202ENST00000381870 DLDP09622 509 aaKnown RBP15.8■□□□□ 0.12
CTNS-202ENST00000381870 ZSCAN5DPP0CG00 497 aa15.8■□□□□ 0.12
CTNS-202ENST00000381870 R3HDM1Q15032 1099 aaKnown RBP15.8■□□□□ 0.12
CTNS-202ENST00000381870 TBC1D9BQ66K14 1250 aa15.8■□□□□ 0.12
CTNS-202ENST00000381870 RINT1Q6NUQ1 792 aa15.8■□□□□ 0.12
CTNS-202ENST00000381870 NET1Q7Z628 596 aaPredicted RBP15.8■□□□□ 0.12
CTNS-202ENST00000381870 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.8■□□□□ 0.12
CTNS-202ENST00000381870 OXNAD1Q96HP4 312 aaPredicted RBP15.8■□□□□ 0.12
CTNS-202ENST00000381870 DMAC2Q9NW81 257 aa15.8■□□□□ 0.12
CTNS-202ENST00000381870 ANAPC7Q9UJX3 599 aa15.8■□□□□ 0.12
CTNS-202ENST00000381870 MTO1Q9Y2Z2 717 aaKnown RBP15.8■□□□□ 0.12
CTNS-202ENST00000381870 ITGB4P16144 1822 aa15.8■□□□□ 0.12
CTNS-202ENST00000381870 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.79■□□□□ 0.12
CTNS-202ENST00000381870 A0A0J9YVX5 310 aa15.79■□□□□ 0.12
CTNS-202ENST00000381870 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.79■□□□□ 0.12
CTNS-202ENST00000381870 TULP1O00294 542 aaPredicted RBP15.79■□□□□ 0.12
CTNS-202ENST00000381870 EIF3DO15371 548 aaKnown RBP eCLIP15.79■□□□□ 0.12
CTNS-202ENST00000381870 SLC26A4O43511 780 aa15.79■□□□□ 0.12
CTNS-202ENST00000381870 TMCC1O94876 653 aa15.79■□□□□ 0.12
CTNS-202ENST00000381870 NOP14P78316 857 aaKnown RBP15.79■□□□□ 0.12
CTNS-202ENST00000381870 HPCAP84074 193 aa15.79■□□□□ 0.12
CTNS-202ENST00000381870 RASA2Q15283 850 aa15.79■□□□□ 0.12
CTNS-202ENST00000381870 RASSF3Q86WH2 238 aa15.79■□□□□ 0.12
CTNS-202ENST00000381870 TREML1Q86YW5 311 aa15.79■□□□□ 0.12
CTNS-202ENST00000381870 THTPAQ9BU02 230 aa15.79■□□□□ 0.12
CTNS-202ENST00000381870 PSMC3IPQ9P2W1 217 aaPredicted RBP15.79■□□□□ 0.12
CTNS-202ENST00000381870 UVRAGQ9P2Y5 699 aa15.79■□□□□ 0.12
CTNS-202ENST00000381870 SLC7A8Q9UHI5 535 aa15.79■□□□□ 0.12
CTNS-202ENST00000381870 RABGAP1Q9Y3P9 1069 aa15.79■□□□□ 0.12
CTNS-202ENST00000381870 NAV1Q8NEY1 1877 aa15.79■□□□□ 0.12
CTNS-202ENST00000381870 ZBTB39O15060 712 aa15.79■□□□□ 0.12
CTNS-202ENST00000381870 PGM3O95394 542 aa15.79■□□□□ 0.12
CTNS-202ENST00000381870 MYL2P10916 166 aa15.79■□□□□ 0.12
CTNS-202ENST00000381870 BMP3P12645 472 aa15.79■□□□□ 0.12
CTNS-202ENST00000381870 GYS1P13807 737 aa15.79■□□□□ 0.12
CTNS-202ENST00000381870 RFX1P22670 979 aa15.79■□□□□ 0.12
CTNS-202ENST00000381870 MAPK4P31152 587 aa15.79■□□□□ 0.12
CTNS-202ENST00000381870 GCLMP48507 274 aa15.79■□□□□ 0.12
CTNS-202ENST00000381870 ACTR3P61158 418 aa15.79■□□□□ 0.12
CTNS-202ENST00000381870 PPP3CAQ08209 521 aa15.79■□□□□ 0.12
CTNS-202ENST00000381870 PDIA2Q13087 525 aaKnown RBP15.79■□□□□ 0.12
CTNS-202ENST00000381870 SFT2D3Q587I9 215 aa15.79■□□□□ 0.12
CTNS-202ENST00000381870 PDSS2Q86YH6 399 aa15.79■□□□□ 0.12
CTNS-202ENST00000381870 TRIM42Q8IWZ5 723 aa15.79■□□□□ 0.12
CTNS-202ENST00000381870 ULK2Q8IYT8 1036 aa15.79■□□□□ 0.12
CTNS-202ENST00000381870 ZBED8Q8IZ13 594 aa15.79■□□□□ 0.12
CTNS-202ENST00000381870 OR6Y1Q8NGX8 325 aa15.79■□□□□ 0.12
CTNS-202ENST00000381870 DDX27Q96GQ7 796 aaKnown RBP15.79■□□□□ 0.12
CTNS-202ENST00000381870 NAP1L4Q99733 375 aaKnown RBP15.79■□□□□ 0.12
CTNS-202ENST00000381870 ANO3Q9BYT9 981 aa15.79■□□□□ 0.12
CTNS-202ENST00000381870 FHDC1Q9C0D6 1143 aaPredicted RBP15.79■□□□□ 0.12
CTNS-202ENST00000381870 TAF1LQ8IZX4 1826 aa15.79■□□□□ 0.12
CTNS-202ENST00000381870 SPATA31A5Q5VU36 1347 aa15.79■□□□□ 0.12
CTNS-202ENST00000381870 SPATA31A6Q5VVP1 1343 aa15.79■□□□□ 0.12
CTNS-202ENST00000381870 SPATA31A7Q8IWB4 1347 aa15.79■□□□□ 0.12
CTNS-202ENST00000381870 ATRNL1Q5VV63 1379 aa15.79■□□□□ 0.12
CTNS-202ENST00000381870 FAM237BA0A1B0GVD1 139 aa15.78■□□□□ 0.12
CTNS-202ENST00000381870 EML1O00423 815 aa15.78■□□□□ 0.12
CTNS-202ENST00000381870 CCDC166P0CW27 439 aa15.78■□□□□ 0.12
CTNS-202ENST00000381870 NOVP48745 357 aa15.78■□□□□ 0.12
CTNS-202ENST00000381870 CENPCQ03188 943 aa15.78■□□□□ 0.12
CTNS-202ENST00000381870 KLF1Q13351 362 aaPredicted RBP15.78■□□□□ 0.12
CTNS-202ENST00000381870 HNRNPDQ14103 355 aaKnown RBP15.78■□□□□ 0.12
CTNS-202ENST00000381870 NFIL3Q16649 462 aa15.78■□□□□ 0.12
CTNS-202ENST00000381870 TMPRSS6Q8IU80 811 aa15.78■□□□□ 0.12
CTNS-202ENST00000381870 ANKMY2Q8IV38 441 aa15.78■□□□□ 0.12
CTNS-202ENST00000381870 PLA2G4CQ9UP65 541 aa15.78■□□□□ 0.12
CTNS-202ENST00000381870 CIB2O75838 187 aa15.78■□□□□ 0.12
CTNS-202ENST00000381870 CALCAP01258 141 aa15.78■□□□□ 0.12
CTNS-202ENST00000381870 FDX1P10109 184 aa15.78■□□□□ 0.12
CTNS-202ENST00000381870 ETS1P14921 441 aa15.78■□□□□ 0.12
CTNS-202ENST00000381870 SFSWAPQ12872 951 aaKnown RBP15.78■□□□□ 0.12
CTNS-202ENST00000381870 MSLNQ13421 630 aaPredicted RBP15.78■□□□□ 0.12
CTNS-202ENST00000381870 MED21Q13503 144 aa15.78■□□□□ 0.12
CTNS-202ENST00000381870 RASA3Q14644 834 aa15.78■□□□□ 0.12
CTNS-202ENST00000381870 SF3B3Q15393 1217 aaKnown RBP15.78■□□□□ 0.12
CTNS-202ENST00000381870 TRMT5Q32P41 509 aaKnown RBP15.78■□□□□ 0.12
CTNS-202ENST00000381870 SH2D4BQ5SQS7 431 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms