RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 DDX42Q86XP3 938 aaKnown RBP eCLIP12.9□□□□□ -0.34
GABPB1-203ENST00000380877 SLC13A5Q86YT5 568 aaPredicted RBP12.9□□□□□ -0.34
GABPB1-203ENST00000380877 COPS5Q92905 334 aa12.9□□□□□ -0.34
GABPB1-203ENST00000380877 FSD1LQ9BXM9 530 aa12.9□□□□□ -0.34
GABPB1-203ENST00000380877 BNIP3LO60238 219 aa12.9□□□□□ -0.34
GABPB1-203ENST00000380877 B3GAT3O94766 335 aa12.9□□□□□ -0.34
GABPB1-203ENST00000380877 RALAP11233 206 aa12.9□□□□□ -0.34
GABPB1-203ENST00000380877 SERPINB6P35237 376 aa12.9□□□□□ -0.34
GABPB1-203ENST00000380877 HIF1AQ16665 826 aa12.9□□□□□ -0.34
GABPB1-203ENST00000380877 ACOT1Q86TX2 421 aa12.9□□□□□ -0.34
GABPB1-203ENST00000380877 ATP6V1G3Q96LB4 118 aa12.9□□□□□ -0.34
GABPB1-203ENST00000380877 NUDCD1Q96RS6 583 aa12.9□□□□□ -0.34
GABPB1-203ENST00000380877 ERP44Q9BS26 406 aa12.9□□□□□ -0.34
GABPB1-203ENST00000380877 PLEKHA5Q9HAU0 1116 aa12.9□□□□□ -0.34
GABPB1-203ENST00000380877 KIAA1257Q9ULG3 409 aa12.9□□□□□ -0.34
GABPB1-203ENST00000380877 IRX4P78413 519 aa12.9□□□□□ -0.35
GABPB1-203ENST00000380877 ARHGEF19Q8IW93 802 aa12.9□□□□□ -0.35
GABPB1-203ENST00000380877 BRSK2Q8IWQ3 736 aa12.9□□□□□ -0.35
GABPB1-203ENST00000380877 MCUQ8NE86 351 aa12.9□□□□□ -0.35
GABPB1-203ENST00000380877 PRG3Q9Y2Y8 225 aaPredicted RBP12.9□□□□□ -0.35
GABPB1-203ENST00000380877 RIPK3Q9Y572 518 aa12.9□□□□□ -0.35
GABPB1-203ENST00000380877 SPEF2Q9C093 1822 aa12.9□□□□□ -0.35
GABPB1-203ENST00000380877 ASTN1O14525 1302 aa12.89□□□□□ -0.35
GABPB1-203ENST00000380877 NFASCO94856 1347 aa12.89□□□□□ -0.35
GABPB1-203ENST00000380877 PPP1R12AO14974 1030 aaPredicted RBP12.89□□□□□ -0.35
GABPB1-203ENST00000380877 KCNN4O15554 427 aa12.89□□□□□ -0.35
GABPB1-203ENST00000380877 LGALS2P05162 132 aa12.89□□□□□ -0.35
GABPB1-203ENST00000380877 VDRP11473 427 aa12.89□□□□□ -0.35
GABPB1-203ENST00000380877 ITIH2P19823 946 aa12.89□□□□□ -0.35
GABPB1-203ENST00000380877 GTF2BQ00403 316 aa12.89□□□□□ -0.35
GABPB1-203ENST00000380877 PSMD6Q15008 389 aa12.89□□□□□ -0.35
GABPB1-203ENST00000380877 DCAF6Q58WW2 860 aa12.89□□□□□ -0.35
GABPB1-203ENST00000380877 CELF3Q5SZQ8 465 aaKnown RBP12.89□□□□□ -0.35
GABPB1-203ENST00000380877 TREML2Q5T2D2 321 aa12.89□□□□□ -0.35
GABPB1-203ENST00000380877 TLK2Q86UE8 772 aa12.89□□□□□ -0.35
GABPB1-203ENST00000380877 INPP4AQ96PE3 977 aaPredicted RBP12.89□□□□□ -0.35
GABPB1-203ENST00000380877 CASZ1Q86V15 1759 aa12.89□□□□□ -0.35
GABPB1-203ENST00000380877 SPATA31C2B4DYI2 1134 aa12.89□□□□□ -0.35
GABPB1-203ENST00000380877 GPR182O15218 404 aa12.89□□□□□ -0.35
GABPB1-203ENST00000380877 FAM200BP0CF97 657 aa12.89□□□□□ -0.35
GABPB1-203ENST00000380877 MCF2P10911 925 aa12.89□□□□□ -0.35
GABPB1-203ENST00000380877 BRAFP15056 766 aa12.89□□□□□ -0.35
GABPB1-203ENST00000380877 OR1G1P47890 313 aa12.89□□□□□ -0.35
GABPB1-203ENST00000380877 GCNT1Q02742 428 aa12.89□□□□□ -0.35
GABPB1-203ENST00000380877 SPARCL1Q14515 664 aa12.89□□□□□ -0.35
GABPB1-203ENST00000380877 P3H1Q32P28 736 aa12.89□□□□□ -0.35
GABPB1-203ENST00000380877 ITPRIPL1Q6GPH6 555 aa12.89□□□□□ -0.35
GABPB1-203ENST00000380877 SKA2Q8WVK7 121 aaPredicted RBP12.89□□□□□ -0.35
GABPB1-203ENST00000380877 VIPAS39Q9H9C1 493 aa12.89□□□□□ -0.35
GABPB1-203ENST00000380877 RSAD1Q9HA92 442 aa12.89□□□□□ -0.35
GABPB1-203ENST00000380877 NFKBIEO00221 500 aa12.89□□□□□ -0.35
GABPB1-203ENST00000380877 COPEO14579 308 aa12.89□□□□□ -0.35
GABPB1-203ENST00000380877 RBP3P10745 1247 aa12.89□□□□□ -0.35
GABPB1-203ENST00000380877 PPP2R2AP63151 447 aa12.89□□□□□ -0.35
GABPB1-203ENST00000380877 DEUP1Q05D60 604 aa12.89□□□□□ -0.35
GABPB1-203ENST00000380877 VEPH1Q14D04 833 aa12.89□□□□□ -0.35
GABPB1-203ENST00000380877 PLCB4Q15147 1175 aa12.89□□□□□ -0.35
GABPB1-203ENST00000380877 EFHC1Q5JVL4 640 aa12.89□□□□□ -0.35
GABPB1-203ENST00000380877 MIIPQ5JXC2 388 aa12.89□□□□□ -0.35
GABPB1-203ENST00000380877 TMEM161BQ8NDZ6 487 aa12.89□□□□□ -0.35
GABPB1-203ENST00000380877 PRDM5Q9NQX1 630 aaPredicted RBP12.89□□□□□ -0.35
GABPB1-203ENST00000380877 AHDC1Q5TGY3 1603 aaPredicted RBP12.89□□□□□ -0.35
GABPB1-203ENST00000380877 A0A0A6YYK5 440 aaPredicted RBP12.88□□□□□ -0.35
GABPB1-203ENST00000380877 UPP2O95045 317 aa12.88□□□□□ -0.35
GABPB1-203ENST00000380877 PMLP29590 882 aa12.88□□□□□ -0.35
GABPB1-203ENST00000380877 KPNA2P52292 529 aaKnown RBP12.88□□□□□ -0.35
GABPB1-203ENST00000380877 PPP3CAQ08209 521 aa12.88□□□□□ -0.35
GABPB1-203ENST00000380877 ASPHQ12797 758 aa12.88□□□□□ -0.35
GABPB1-203ENST00000380877 ARSHQ5FYA8 562 aa12.88□□□□□ -0.35
GABPB1-203ENST00000380877 IQSEC1Q6DN90 963 aa12.88□□□□□ -0.35
GABPB1-203ENST00000380877 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.88□□□□□ -0.35
GABPB1-203ENST00000380877 ELMO3Q96BJ8 720 aa12.88□□□□□ -0.35
GABPB1-203ENST00000380877 VPS39Q96JC1 886 aa12.88□□□□□ -0.35
GABPB1-203ENST00000380877 SPON2Q9BUD6 331 aa12.88□□□□□ -0.35
GABPB1-203ENST00000380877 LRRIQ3A6PVS8 624 aaPredicted RBP12.88□□□□□ -0.35
GABPB1-203ENST00000380877 GPC4O75487 556 aa12.88□□□□□ -0.35
GABPB1-203ENST00000380877 ZNF280AP59817 542 aaPredicted RBP12.88□□□□□ -0.35
GABPB1-203ENST00000380877 PCSK9Q8NBP7 692 aaKnown RBP12.88□□□□□ -0.35
GABPB1-203ENST00000380877 SPATA18Q8TC71 538 aa12.88□□□□□ -0.35
GABPB1-203ENST00000380877 ASAP3Q8TDY4 903 aa12.88□□□□□ -0.35
GABPB1-203ENST00000380877 DNAJB3Q8WWF6 145 aa12.88□□□□□ -0.35
GABPB1-203ENST00000380877 RBM15Q96T37 977 aaKnown RBP eCLIP12.88□□□□□ -0.357e-13■■■■■ 35
GABPB1-203ENST00000380877 TINF2Q9BSI4 451 aa12.88□□□□□ -0.35
GABPB1-203ENST00000380877 SYT17Q9BSW7 474 aa12.88□□□□□ -0.35
GABPB1-203ENST00000380877 ZNF518BQ9C0D4 1074 aa12.88□□□□□ -0.35
GABPB1-203ENST00000380877 ARFGEF2Q9Y6D5 1785 aa12.88□□□□□ -0.35
GABPB1-203ENST00000380877 LRP6O75581 1613 aa12.88□□□□□ -0.35
GABPB1-203ENST00000380877 ZBTB24O43167 697 aaPredicted RBP12.88□□□□□ -0.35
GABPB1-203ENST00000380877 ALDH1A1P00352 501 aa12.88□□□□□ -0.35
GABPB1-203ENST00000380877 GLRA2P23416 452 aa12.88□□□□□ -0.35
GABPB1-203ENST00000380877 PTPN11Q06124 597 aaPredicted RBP12.88□□□□□ -0.35
GABPB1-203ENST00000380877 EPM2AIP1Q7L775 607 aaPredicted RBP12.88□□□□□ -0.35
GABPB1-203ENST00000380877 TTC17Q96AE7 1141 aa12.88□□□□□ -0.35
GABPB1-203ENST00000380877 C9orf72Q96LT7 481 aa12.88□□□□□ -0.35
GABPB1-203ENST00000380877 CYP3A43Q9HB55 503 aa12.88□□□□□ -0.35
GABPB1-203ENST00000380877 RAB6BQ9NRW1 208 aa12.88□□□□□ -0.35
GABPB1-203ENST00000380877 DDX3XO00571 662 aaKnown RBP eCLIP12.88□□□□□ -0.354e-11■■■□□ 15.2
GABPB1-203ENST00000380877 SH3BP5O60239 455 aa12.88□□□□□ -0.35
GABPB1-203ENST00000380877 APRTP07741 180 aa12.88□□□□□ -0.35
GABPB1-203ENST00000380877 MLXIPLQ9NP71 852 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms