RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 SPTLC1O15269 473 aa11.27□□□□□ -0.61
CLCN4-202ENST00000380833 C6orf222P0C671 652 aaPredicted RBP11.27□□□□□ -0.61
CLCN4-202ENST00000380833 CASP1P29466 404 aa11.27□□□□□ -0.61
CLCN4-202ENST00000380833 MKRN4PQ13434 485 aaPredicted RBP11.27□□□□□ -0.61
CLCN4-202ENST00000380833 MAPK11Q15759 364 aa11.27□□□□□ -0.61
CLCN4-202ENST00000380833 TMEM270Q6UE05 265 aa11.27□□□□□ -0.61
CLCN4-202ENST00000380833 ZNF589Q86UQ0 364 aaPredicted RBP11.27□□□□□ -0.61
CLCN4-202ENST00000380833 C19orf18Q8NEA5 215 aa11.27□□□□□ -0.61
CLCN4-202ENST00000380833 NSL1Q96IY1 281 aa11.27□□□□□ -0.61
CLCN4-202ENST00000380833 PIN4Q9Y237 131 aaKnown RBP11.27□□□□□ -0.61
CLCN4-202ENST00000380833 AFF2P51816 1311 aa11.27□□□□□ -0.61
CLCN4-202ENST00000380833 KRT36O76013 467 aa11.27□□□□□ -0.61
CLCN4-202ENST00000380833 ZNF667Q5HYK9 610 aa11.27□□□□□ -0.61
CLCN4-202ENST00000380833 TMEM260Q9NX78 707 aa11.27□□□□□ -0.61
CLCN4-202ENST00000380833 RBMX2Q9Y388 322 aaKnown RBP11.27□□□□□ -0.61
CLCN4-202ENST00000380833 ARIH2O95376 493 aa11.27□□□□□ -0.61
CLCN4-202ENST00000380833 SEC24CP53992 1094 aa11.27□□□□□ -0.61
CLCN4-202ENST00000380833 RPS6P62753 249 aaKnown RBP11.27□□□□□ -0.61
CLCN4-202ENST00000380833 PLOD1Q02809 727 aaPredicted RBP11.27□□□□□ -0.61
CLCN4-202ENST00000380833 RC3H1Q5TC82 1133 aaKnown RBP11.27□□□□□ -0.61
CLCN4-202ENST00000380833 DDIASQ8IXT1 998 aa11.27□□□□□ -0.61
CLCN4-202ENST00000380833 OR6P1Q8NGX9 317 aa11.27□□□□□ -0.61
CLCN4-202ENST00000380833 AGBL1Q96MI9 1066 aa11.27□□□□□ -0.61
CLCN4-202ENST00000380833 TIMMDC1Q9NPL8 285 aa11.27□□□□□ -0.61
CLCN4-202ENST00000380833 MLXQ9UH92 298 aa11.27□□□□□ -0.61
CLCN4-202ENST00000380833 LEMD3Q9Y2U8 911 aa11.27□□□□□ -0.61
CLCN4-202ENST00000380833 A0A0G2JPF8 293 aa11.26□□□□□ -0.61
CLCN4-202ENST00000380833 CCDC182A6NF36 153 aa11.26□□□□□ -0.61
CLCN4-202ENST00000380833 HNRNPCL3B7ZW38 293 aa11.26□□□□□ -0.61
CLCN4-202ENST00000380833 EPN2O95208 641 aa11.26□□□□□ -0.61
CLCN4-202ENST00000380833 PLEKHA8P1O95397 391 aa11.26□□□□□ -0.61
CLCN4-202ENST00000380833 HNRNPCL4P0DMR1 293 aa11.26□□□□□ -0.61
CLCN4-202ENST00000380833 PLCG1P19174 1290 aa11.26□□□□□ -0.61
CLCN4-202ENST00000380833 GPC3P51654 580 aa11.26□□□□□ -0.61
CLCN4-202ENST00000380833 DMC1Q14565 340 aa11.26□□□□□ -0.61
CLCN4-202ENST00000380833 SPDYE7PQ495Y7 208 aa11.26□□□□□ -0.61
CLCN4-202ENST00000380833 GRPEL2Q8TAA5 225 aa11.26□□□□□ -0.61
CLCN4-202ENST00000380833 UBASH3BQ8TF42 649 aa11.26□□□□□ -0.61
CLCN4-202ENST00000380833 AURKCQ9UQB9 309 aa11.26□□□□□ -0.61
CLCN4-202ENST00000380833 MTMR6Q9Y217 621 aa11.26□□□□□ -0.61
CLCN4-202ENST00000380833 ATP9BO43861 1147 aa11.26□□□□□ -0.61
CLCN4-202ENST00000380833 BCAP31P51572 246 aa11.26□□□□□ -0.61
CLCN4-202ENST00000380833 ZNF746Q6NUN9 644 aaPredicted RBP11.26□□□□□ -0.61
CLCN4-202ENST00000380833 INPP5DQ92835 1189 aa11.26□□□□□ -0.61
CLCN4-202ENST00000380833 TEX12Q9BXU0 123 aa11.26□□□□□ -0.61
CLCN4-202ENST00000380833 RRN3Q9NYV6 651 aa11.26□□□□□ -0.61
CLCN4-202ENST00000380833 RARBP10826 455 aa11.26□□□□□ -0.61
CLCN4-202ENST00000380833 CDH2P19022 906 aaPredicted RBP11.26□□□□□ -0.61
CLCN4-202ENST00000380833 YWHABP31946 246 aaKnown RBP11.26□□□□□ -0.61
CLCN4-202ENST00000380833 GCLMP48507 274 aa11.26□□□□□ -0.61
CLCN4-202ENST00000380833 SERPINH1P50454 418 aaKnown RBP11.26□□□□□ -0.61
CLCN4-202ENST00000380833 CAV1Q03135 178 aa11.26□□□□□ -0.61
CLCN4-202ENST00000380833 EPS8Q12929 822 aa11.26□□□□□ -0.61
CLCN4-202ENST00000380833 USF2Q15853 346 aaPredicted RBP11.26□□□□□ -0.61
CLCN4-202ENST00000380833 SUSD4Q5VX71 490 aa11.26□□□□□ -0.61
CLCN4-202ENST00000380833 ATG14Q6ZNE5 492 aa11.26□□□□□ -0.61
CLCN4-202ENST00000380833 RTKN2Q8IZC4 609 aa11.26□□□□□ -0.61
CLCN4-202ENST00000380833 MDM1Q8TC05 714 aa11.26□□□□□ -0.61
CLCN4-202ENST00000380833 SLC9A1P19634 815 aa11.26□□□□□ -0.61
CLCN4-202ENST00000380833 CLCN2P51788 898 aa11.26□□□□□ -0.61
CLCN4-202ENST00000380833 BPIFB4P59827 614 aa11.26□□□□□ -0.61
CLCN4-202ENST00000380833 LGALS3BPQ08380 585 aa11.26□□□□□ -0.61
CLCN4-202ENST00000380833 TAF1CQ15572 869 aaPredicted RBP11.26□□□□□ -0.61
CLCN4-202ENST00000380833 TTC23LQ6PF05 361 aa11.26□□□□□ -0.61
CLCN4-202ENST00000380833 UNC45BQ8IWX7 931 aa11.26□□□□□ -0.61
CLCN4-202ENST00000380833 RHOT2Q8IXI1 618 aa11.26□□□□□ -0.61
CLCN4-202ENST00000380833 RANBP17Q9H2T7 1088 aaKnown RBP11.26□□□□□ -0.61
CLCN4-202ENST00000380833 AASDHPPTQ9NRN7 309 aa11.26□□□□□ -0.61
CLCN4-202ENST00000380833 TADA2AO75478 443 aa11.26□□□□□ -0.61
CLCN4-202ENST00000380833 PCCAP05165 728 aaPredicted RBP11.26□□□□□ -0.61
CLCN4-202ENST00000380833 PDIA3P30101 505 aaKnown RBP11.26□□□□□ -0.61
CLCN4-202ENST00000380833 WEE1P30291 646 aa11.26□□□□□ -0.61
CLCN4-202ENST00000380833 CAPZA2P47755 286 aa11.26□□□□□ -0.61
CLCN4-202ENST00000380833 TAF8Q7Z7C8 310 aa11.26□□□□□ -0.61
CLCN4-202ENST00000380833 IQCF2Q8IXL9 164 aa11.26□□□□□ -0.61
CLCN4-202ENST00000380833 SPRTNQ9H040 489 aaPredicted RBP11.26□□□□□ -0.61
CLCN4-202ENST00000380833 ZNF302Q9NR11 478 aa11.26□□□□□ -0.61
CLCN4-202ENST00000380833 EMILIN3Q9NT22 766 aa11.26□□□□□ -0.61
CLCN4-202ENST00000380833 CDHR2Q9BYE9 1310 aa11.25□□□□□ -0.61
CLCN4-202ENST00000380833 ZNF335Q9H4Z2 1342 aaPredicted RBP11.25□□□□□ -0.61
CLCN4-202ENST00000380833 NPM3O75607 178 aaKnown RBP11.25□□□□□ -0.61
CLCN4-202ENST00000380833 TOMM70O94826 608 aa11.25□□□□□ -0.61
CLCN4-202ENST00000380833 MED26O95402 600 aa11.25□□□□□ -0.61
CLCN4-202ENST00000380833 FOSP01100 380 aaPredicted RBP11.25□□□□□ -0.61
CLCN4-202ENST00000380833 H2AFXP16104 143 aaPredicted RBP11.25□□□□□ -0.61
CLCN4-202ENST00000380833 AKT1P31749 480 aa11.25□□□□□ -0.61
CLCN4-202ENST00000380833 TAB1Q15750 504 aa11.25□□□□□ -0.61
CLCN4-202ENST00000380833 GPATCH4Q5T3I0 446 aaKnown RBP11.25□□□□□ -0.61
CLCN4-202ENST00000380833 CACUL1Q86Y37 369 aa11.25□□□□□ -0.61
CLCN4-202ENST00000380833 DRAXINQ8NBI3 349 aaPredicted RBP11.25□□□□□ -0.61
CLCN4-202ENST00000380833 PYROXD1Q8WU10 500 aa11.25□□□□□ -0.61
CLCN4-202ENST00000380833 KIF12Q96FN5 646 aa11.25□□□□□ -0.61
CLCN4-202ENST00000380833 COX4I2Q96KJ9 171 aa11.25□□□□□ -0.61
CLCN4-202ENST00000380833 PIH1D3Q9NQM4 214 aaKnown RBP11.25□□□□□ -0.61
CLCN4-202ENST00000380833 GPC6Q9Y625 555 aaPredicted RBP11.25□□□□□ -0.61
CLCN4-202ENST00000380833 POTEMA6NI47 508 aa11.25□□□□□ -0.61
CLCN4-202ENST00000380833 ATXN3P54252 364 aaPredicted RBP11.25□□□□□ -0.61
CLCN4-202ENST00000380833 HMGCS2P54868 508 aa11.25□□□□□ -0.61
CLCN4-202ENST00000380833 TNFAIP2Q03169 654 aa11.25□□□□□ -0.61
CLCN4-202ENST00000380833 SYTL3Q4VX76 610 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms