RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 ADCY6O43306 1168 aa15.17■□□□□ 0.02
CLCN4-201ENST00000380829 SPOPO43791 374 aa15.17■□□□□ 0.02
CLCN4-201ENST00000380829 FAM153BP0C7A2 387 aa15.17■□□□□ 0.02
CLCN4-201ENST00000380829 EZRP15311 586 aaKnown RBP15.17■□□□□ 0.02
CLCN4-201ENST00000380829 CD58P19256 250 aa15.17■□□□□ 0.02
CLCN4-201ENST00000380829 TNFRSF8P28908 595 aa15.17■□□□□ 0.02
CLCN4-201ENST00000380829 HPDP32754 393 aaPredicted RBP15.17■□□□□ 0.02
CLCN4-201ENST00000380829 SARNPP82979 210 aaKnown RBP15.17■□□□□ 0.02
CLCN4-201ENST00000380829 DUOXA2Q1HG44 320 aa15.17■□□□□ 0.02
CLCN4-201ENST00000380829 FAM110CQ1W6H9 321 aa15.17■□□□□ 0.02
CLCN4-201ENST00000380829 FAM153CQ494X1 144 aa15.17■□□□□ 0.02
CLCN4-201ENST00000380829 ZNF677Q86XU0 584 aa15.17■□□□□ 0.02
CLCN4-201ENST00000380829 MCOLN2Q8IZK6 566 aa15.17■□□□□ 0.02
CLCN4-201ENST00000380829 UBL4BQ8N7F7 174 aa15.17■□□□□ 0.02
CLCN4-201ENST00000380829 EMID1Q96A84 441 aaPredicted RBP15.17■□□□□ 0.02
CLCN4-201ENST00000380829 ZSWIM1Q9BR11 485 aa15.17■□□□□ 0.02
CLCN4-201ENST00000380829 TINF2Q9BSI4 451 aa15.17■□□□□ 0.02
CLCN4-201ENST00000380829 OSBPL7Q9BZF2 842 aa15.17■□□□□ 0.02
CLCN4-201ENST00000380829 TRIM7Q9C029 511 aa15.17■□□□□ 0.02
CLCN4-201ENST00000380829 UVRAGQ9P2Y5 699 aa15.17■□□□□ 0.02
CLCN4-201ENST00000380829 FAM153AQ9UHL3 310 aa15.17■□□□□ 0.02
CLCN4-201ENST00000380829 CPA4Q9UI42 421 aa15.17■□□□□ 0.02
CLCN4-201ENST00000380829 CENPFP49454 3210 aa15.17■□□□□ 0.02
CLCN4-201ENST00000380829 CCDC188H7C350 402 aa15.17■□□□□ 0.02
CLCN4-201ENST00000380829 GPR25O00155 361 aa15.17■□□□□ 0.02
CLCN4-201ENST00000380829 TMEM191BP0C7N4 346 aa15.17■□□□□ 0.02
CLCN4-201ENST00000380829 RRM1P23921 792 aa15.17■□□□□ 0.02
CLCN4-201ENST00000380829 PEX19P40855 299 aa15.17■□□□□ 0.02
CLCN4-201ENST00000380829 PHKA2P46019 1235 aa15.17■□□□□ 0.02
CLCN4-201ENST00000380829 NSFP46459 744 aaKnown RBP15.17■□□□□ 0.02
CLCN4-201ENST00000380829 AP3M2P53677 418 aa15.17■□□□□ 0.02
CLCN4-201ENST00000380829 GRM1Q13255 1194 aa15.17■□□□□ 0.02
CLCN4-201ENST00000380829 ALS2CLQ60I27 953 aa15.17■□□□□ 0.02
CLCN4-201ENST00000380829 SCARA5Q6ZMJ2 495 aa15.17■□□□□ 0.02
CLCN4-201ENST00000380829 CCDC121Q6ZUS5 278 aa15.17■□□□□ 0.02
CLCN4-201ENST00000380829 PPP1R13LQ8WUF5 828 aa15.17■□□□□ 0.02
CLCN4-201ENST00000380829 TBC1D31Q96DN5 1066 aa15.17■□□□□ 0.02
CLCN4-201ENST00000380829 CPB2Q96IY4 423 aa15.17■□□□□ 0.02
CLCN4-201ENST00000380829 ANAPC7Q9UJX3 599 aa15.17■□□□□ 0.02
CLCN4-201ENST00000380829 TTC7AQ9ULT0 858 aaPredicted RBP15.17■□□□□ 0.02
CLCN4-201ENST00000380829 MIF4GDA9UHW6 222 aaKnown RBP15.16■□□□□ 0.02
CLCN4-201ENST00000380829 THAP12O43422 761 aa15.16■□□□□ 0.02
CLCN4-201ENST00000380829 CYP1A1P04798 512 aaPredicted RBP15.16■□□□□ 0.02
CLCN4-201ENST00000380829 GBP2P32456 591 aaPredicted RBP15.16■□□□□ 0.02
CLCN4-201ENST00000380829 TRPC3Q13507 836 aa15.16■□□□□ 0.02
CLCN4-201ENST00000380829 ACVR2BQ13705 512 aa15.16■□□□□ 0.02
CLCN4-201ENST00000380829 ZNF394Q53GI3 561 aa15.16■□□□□ 0.02
CLCN4-201ENST00000380829 C6orf89Q6UWU4 347 aa15.16■□□□□ 0.02
CLCN4-201ENST00000380829 LINC01465Q8N7H1 131 aa15.16■□□□□ 0.02
CLCN4-201ENST00000380829 OR6J1Q8NGC5 347 aa15.16■□□□□ 0.02
CLCN4-201ENST00000380829 RPS6KC1Q96S38 1066 aa15.16■□□□□ 0.02
CLCN4-201ENST00000380829 CELF4Q9BZC1 486 aaKnown RBP15.16■□□□□ 0.02
CLCN4-201ENST00000380829 PRMT7Q9NVM4 692 aaPredicted RBP15.16■□□□□ 0.02
CLCN4-201ENST00000380829 TNFSF13BQ9Y275 285 aa15.16■□□□□ 0.02
CLCN4-201ENST00000380829 GOLGA6L7A0A1B0GV03 622 aa15.16■□□□□ 0.02
CLCN4-201ENST00000380829 KIF3CO14782 793 aa15.16■□□□□ 0.02
CLCN4-201ENST00000380829 FAM107AO95990 144 aa15.16■□□□□ 0.02
CLCN4-201ENST00000380829 IRX1P78414 480 aaPredicted RBP15.16■□□□□ 0.02
CLCN4-201ENST00000380829 CENPCQ03188 943 aa15.16■□□□□ 0.02
CLCN4-201ENST00000380829 DUSP28Q4G0W2 176 aa15.16■□□□□ 0.02
CLCN4-201ENST00000380829 PRAMEF19Q5SWL8 479 aa15.16■□□□□ 0.02
CLCN4-201ENST00000380829 CST9Q5W186 159 aa15.16■□□□□ 0.02
CLCN4-201ENST00000380829 EMBQ6PCB8 327 aa15.16■□□□□ 0.02
CLCN4-201ENST00000380829 MTHFD1LQ6UB35 978 aa15.16■□□□□ 0.02
CLCN4-201ENST00000380829 CD101Q93033 1021 aa15.16■□□□□ 0.02
CLCN4-201ENST00000380829 C11orf70Q9BRQ4 267 aa15.16■□□□□ 0.02
CLCN4-201ENST00000380829 ERVK-5Q9HDB9 667 aa15.16■□□□□ 0.02
CLCN4-201ENST00000380829 MAGEB2O15479 319 aa15.15■□□□□ 0.02
CLCN4-201ENST00000380829 MMP3P08254 477 aa15.15■□□□□ 0.02
CLCN4-201ENST00000380829 GCKP35557 465 aa15.15■□□□□ 0.02
CLCN4-201ENST00000380829 MDH1P40925 334 aaKnown RBP15.15■□□□□ 0.02
CLCN4-201ENST00000380829 PEX5P50542 639 aa15.15■□□□□ 0.02
CLCN4-201ENST00000380829 GUCY2FP51841 1108 aa15.15■□□□□ 0.02
CLCN4-201ENST00000380829 PAK2Q13177 524 aa15.15■□□□□ 0.02
CLCN4-201ENST00000380829 AMHR2Q16671 573 aa15.15■□□□□ 0.02
CLCN4-201ENST00000380829 QPCTQ16769 361 aa15.15■□□□□ 0.02
CLCN4-201ENST00000380829 DDX42Q86XP3 938 aaKnown RBP eCLIP15.15■□□□□ 0.02
CLCN4-201ENST00000380829 ZNF483Q8TF39 744 aaPredicted RBP15.15■□□□□ 0.02
CLCN4-201ENST00000380829 NLRP7Q8WX94 980 aa15.15■□□□□ 0.02
CLCN4-201ENST00000380829 NFKBIZQ9BYH8 718 aa15.15■□□□□ 0.02
CLCN4-201ENST00000380829 ABHD16BQ9H3Z7 469 aa15.15■□□□□ 0.02
CLCN4-201ENST00000380829 RPF1Q9H9Y2 349 aaKnown RBP15.15■□□□□ 0.02
CLCN4-201ENST00000380829 CNTN6Q9UQ52 1028 aa15.15■□□□□ 0.02
CLCN4-201ENST00000380829 MROH7Q68CQ1 1323 aa15.15■□□□□ 0.02
CLCN4-201ENST00000380829 TTI1O43156 1089 aa15.15■□□□□ 0.02
CLCN4-201ENST00000380829 NFICP08651 508 aa15.15■□□□□ 0.02
CLCN4-201ENST00000380829 KRT19P08727 400 aa15.15■□□□□ 0.02
CLCN4-201ENST00000380829 WEE2P0C1S8 567 aa15.15■□□□□ 0.02
CLCN4-201ENST00000380829 TMOD1P28289 359 aa15.15■□□□□ 0.02
CLCN4-201ENST00000380829 CDC25CP30307 473 aa15.15■□□□□ 0.02
CLCN4-201ENST00000380829 MAPK4P31152 587 aa15.15■□□□□ 0.02
CLCN4-201ENST00000380829 NOMO3P69849 1222 aa15.15■□□□□ 0.02
CLCN4-201ENST00000380829 SURF1Q15526 300 aa15.15■□□□□ 0.02
CLCN4-201ENST00000380829 GRIK4Q16099 956 aa15.15■□□□□ 0.02
CLCN4-201ENST00000380829 SGSM1Q2NKQ1 1148 aa15.15■□□□□ 0.02
CLCN4-201ENST00000380829 ZNF699Q32M78 642 aa15.15■□□□□ 0.02
CLCN4-201ENST00000380829 CFAP58Q5T655 872 aa15.15■□□□□ 0.02
CLCN4-201ENST00000380829 MON1BQ7L1V2 547 aa15.15■□□□□ 0.02
CLCN4-201ENST00000380829 CAVIN3Q969G5 261 aa15.15■□□□□ 0.02
CLCN4-201ENST00000380829 NIF3L1Q9GZT8 377 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms