RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 LIMS2Q7Z4I7 341 aa20.16■□□□□ 0.82
SMN2-202ENST00000380742 ARHGEF19Q8IW93 802 aa20.16■□□□□ 0.82
SMN2-202ENST00000380742 LRCH3Q96II8 777 aa20.16■□□□□ 0.82
SMN2-202ENST00000380742 NT5C1BQ96P26 610 aa20.16■□□□□ 0.82
SMN2-202ENST00000380742 HERC2P3Q9BVR0 1158 aa20.16■□□□□ 0.82
SMN2-202ENST00000380742 CHST7Q9NS84 486 aa20.16■□□□□ 0.82
SMN2-202ENST00000380742 L1RE1Q9UN81 338 aa20.16■□□□□ 0.82
SMN2-202ENST00000380742 LZTS1Q9Y250 596 aa20.16■□□□□ 0.82
SMN2-202ENST00000380742 TIMM13Q9Y5L4 95 aaPredicted RBP20.16■□□□□ 0.82
SMN2-202ENST00000380742 MYO9BQ13459 2157 aa20.15■□□□□ 0.82
SMN2-202ENST00000380742 ODC1P11926 461 aa20.15■□□□□ 0.82
SMN2-202ENST00000380742 ASPAP45381 313 aa20.15■□□□□ 0.82
SMN2-202ENST00000380742 PLCB2Q00722 1185 aa20.15■□□□□ 0.82
SMN2-202ENST00000380742 USP41Q3LFD5 358 aa20.15■□□□□ 0.82
SMN2-202ENST00000380742 RTP2Q5QGT7 225 aa20.15■□□□□ 0.82
SMN2-202ENST00000380742 WSCD1Q658N2 575 aa20.15■□□□□ 0.82
SMN2-202ENST00000380742 SARM1Q6SZW1 724 aa20.15■□□□□ 0.82
SMN2-202ENST00000380742 SCARA5Q6ZMJ2 495 aa20.15■□□□□ 0.82
SMN2-202ENST00000380742 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.15■□□□□ 0.82
SMN2-202ENST00000380742 VPS52Q8N1B4 723 aa20.15■□□□□ 0.82
SMN2-202ENST00000380742 TOP6BLQ8N6T0 577 aa20.15■□□□□ 0.82
SMN2-202ENST00000380742 POF1BQ8WVV4 589 aa20.15■□□□□ 0.82
SMN2-202ENST00000380742 MMS19Q96T76 1030 aa20.15■□□□□ 0.82
SMN2-202ENST00000380742 NIF3L1Q9GZT8 377 aa20.15■□□□□ 0.82
SMN2-202ENST00000380742 SDCBP2Q9H190 292 aa20.15■□□□□ 0.82
SMN2-202ENST00000380742 TTYH1Q9H313 450 aaPredicted RBP20.15■□□□□ 0.82
SMN2-202ENST00000380742 SMYD3Q9H7B4 428 aa20.15■□□□□ 0.82
SMN2-202ENST00000380742 RFXAPO00287 272 aa20.14■□□□□ 0.81
SMN2-202ENST00000380742 SYN3O14994 580 aa20.14■□□□□ 0.81
SMN2-202ENST00000380742 HUS1O60921 280 aa20.14■□□□□ 0.81
SMN2-202ENST00000380742 CYP11A1P05108 521 aa20.14■□□□□ 0.81
SMN2-202ENST00000380742 TYMPP19971 482 aa20.14■□□□□ 0.81
SMN2-202ENST00000380742 RAP1GAPP47736 663 aa20.14■□□□□ 0.81
SMN2-202ENST00000380742 CDH8P55286 799 aa20.14■□□□□ 0.81
SMN2-202ENST00000380742 UBE3AQ05086 875 aa20.14■□□□□ 0.81
SMN2-202ENST00000380742 CAMK1Q14012 370 aa20.14■□□□□ 0.81
SMN2-202ENST00000380742 GJB7Q6PEY0 223 aa20.14■□□□□ 0.81
SMN2-202ENST00000380742 DPH6Q7L8W6 267 aa20.14■□□□□ 0.81
SMN2-202ENST00000380742 CEP57Q86XR8 500 aa20.14■□□□□ 0.81
SMN2-202ENST00000380742 PDCL2Q8N4E4 241 aa20.14■□□□□ 0.81
SMN2-202ENST00000380742 APPL2Q8NEU8 664 aa20.14■□□□□ 0.81
SMN2-202ENST00000380742 GDPD5Q8WTR4 605 aa20.14■□□□□ 0.81
SMN2-202ENST00000380742 ARID3AQ99856 593 aa20.14■□□□□ 0.81
SMN2-202ENST00000380742 LSM14BQ9BX40 385 aaKnown RBP20.14■□□□□ 0.81
SMN2-202ENST00000380742 BCO2Q9BYV7 579 aa20.14■□□□□ 0.81
SMN2-202ENST00000380742 ZBP1Q9H171 429 aa20.14■□□□□ 0.81
SMN2-202ENST00000380742 PUF60Q9UHX1 559 aaKnown RBP20.14■□□□□ 0.81
SMN2-202ENST00000380742 CDH23Q9H251 3354 aa20.14■□□□□ 0.81
SMN2-202ENST00000380742 WEE2P0C1S8 567 aa20.13■□□□□ 0.81
SMN2-202ENST00000380742 P4HA1P13674 534 aa20.13■□□□□ 0.81
SMN2-202ENST00000380742 PBX1P40424 430 aa20.13■□□□□ 0.81
SMN2-202ENST00000380742 ERVFC1P60507 584 aa20.13■□□□□ 0.81
SMN2-202ENST00000380742 KIAA0319Q5VV43 1072 aa20.13■□□□□ 0.81
SMN2-202ENST00000380742 RRAGAQ7L523 313 aa20.13■□□□□ 0.81
SMN2-202ENST00000380742 OSTM1Q86WC4 334 aa20.13■□□□□ 0.81
SMN2-202ENST00000380742 PPM1KQ8N3J5 372 aa20.13■□□□□ 0.81
SMN2-202ENST00000380742 KBTBD7Q8WVZ9 684 aa20.13■□□□□ 0.81
SMN2-202ENST00000380742 KAT5Q92993 513 aa20.13■□□□□ 0.81
SMN2-202ENST00000380742 MRPL45Q9BRJ2 306 aaKnown RBP20.13■□□□□ 0.81
SMN2-202ENST00000380742 TTPALQ9BTX7 342 aa20.13■□□□□ 0.81
SMN2-202ENST00000380742 APEX2Q9UBZ4 518 aa20.13■□□□□ 0.81
SMN2-202ENST00000380742 AJAP1Q9UKB5 411 aaPredicted RBP20.13■□□□□ 0.81
SMN2-202ENST00000380742 TMEM265A0A087WTH1 108 aa20.12■□□□□ 0.81
SMN2-202ENST00000380742 CBFA2T2O43439 604 aa20.12■□□□□ 0.81
SMN2-202ENST00000380742 LPXNO60711 386 aa20.12■□□□□ 0.81
SMN2-202ENST00000380742 NOL4O94818 638 aa20.12■□□□□ 0.81
SMN2-202ENST00000380742 CTSAP10619 480 aa20.12■□□□□ 0.81
SMN2-202ENST00000380742 GLUD2P49448 558 aa20.12■□□□□ 0.81
SMN2-202ENST00000380742 DSG1Q02413 1049 aa20.12■□□□□ 0.81
SMN2-202ENST00000380742 CUL2Q13617 745 aa20.12■□□□□ 0.81
SMN2-202ENST00000380742 MRPL58Q14197 206 aaKnown RBP20.12■□□□□ 0.81
SMN2-202ENST00000380742 HABP4Q5JVS0 413 aaKnown RBP20.12■□□□□ 0.81
SMN2-202ENST00000380742 VARS2Q5ST30 1063 aaKnown RBP20.12■□□□□ 0.81
SMN2-202ENST00000380742 KLHDC7AQ5VTJ3 777 aa20.12■□□□□ 0.81
SMN2-202ENST00000380742 PRSS55Q6UWB4 352 aaPredicted RBP20.12■□□□□ 0.81
SMN2-202ENST00000380742 ADGRF2Q8IZF7 708 aa20.12■□□□□ 0.81
SMN2-202ENST00000380742 AUTS2Q8WXX7 1259 aa20.12■□□□□ 0.81
SMN2-202ENST00000380742 RIN2Q8WYP3 895 aaPredicted RBP20.12■□□□□ 0.81
SMN2-202ENST00000380742 FAXDC2Q96IV6 333 aa20.12■□□□□ 0.81
SMN2-202ENST00000380742 KREMEN1Q96MU8 473 aa20.12■□□□□ 0.81
SMN2-202ENST00000380742 UBE2TQ9NPD8 197 aaPredicted RBP20.12■□□□□ 0.81
SMN2-202ENST00000380742 PLCB1Q9NQ66 1216 aa20.12■□□□□ 0.81
SMN2-202ENST00000380742 STK39Q9UEW8 545 aa20.12■□□□□ 0.81
SMN2-202ENST00000380742 DSEQ9UL01 958 aa20.12■□□□□ 0.81
SMN2-202ENST00000380742 NME7Q9Y5B8 376 aa20.12■□□□□ 0.81
SMN2-202ENST00000380742 A0A1W2PQC6 194 aa20.11■□□□□ 0.81
SMN2-202ENST00000380742 ARHGEF37A1IGU5 675 aa20.11■□□□□ 0.81
SMN2-202ENST00000380742 FSD2A1L4K1 749 aa20.11■□□□□ 0.81
SMN2-202ENST00000380742 EPHB6O15197 1021 aa20.11■□□□□ 0.81
SMN2-202ENST00000380742 TACC1O75410 805 aa20.11■□□□□ 0.81
SMN2-202ENST00000380742 CSPG5O95196 566 aa20.11■□□□□ 0.81
SMN2-202ENST00000380742 GCNT1Q02742 428 aa20.11■□□□□ 0.81
SMN2-202ENST00000380742 OVOS1Q6IE37 1185 aa20.11■□□□□ 0.81
SMN2-202ENST00000380742 TMEM86AQ8N2M4 240 aa20.11■□□□□ 0.81
SMN2-202ENST00000380742 LNX1Q8TBB1 728 aaPredicted RBP20.11■□□□□ 0.81
SMN2-202ENST00000380742 PCMTD1Q96MG8 357 aaPredicted RBP20.11■□□□□ 0.81
SMN2-202ENST00000380742 RTP3Q9BQQ7 232 aa20.11■□□□□ 0.81
SMN2-202ENST00000380742 TRIM5Q9C035 493 aa20.11■□□□□ 0.81
SMN2-202ENST00000380742 GANQ9H2C0 597 aa20.11■□□□□ 0.81
SMN2-202ENST00000380742 CYP3A43Q9HB55 503 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms