RNA–Protein interactions for RNA: ENST00000380152.7

BRCA2-201, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 5 BASIC

Gene BRCA2, Length 11,986 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-201ENST00000380152 AGAP11Q8TF27 550 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 SNRNP27Q8WVK2 155 aaKnown RBP4.39□□□□□ -1.71
BRCA2-201ENST00000380152 DHX38Q92620 1227 aaKnown RBP4.39□□□□□ -1.71
BRCA2-201ENST00000380152 E2F7Q96AV8 911 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 KIFC3Q9BVG8 833 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 WHRNQ9P202 907 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 TSR3Q9UJK0 312 aaKnown RBP4.39□□□□□ -1.71
BRCA2-201ENST00000380152 PCDHB2Q9Y5E7 798 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 FAM208AQ9UK61 1670 aaKnown RBP4.39□□□□□ -1.71
BRCA2-201ENST00000380152 UBA6A0AVT1 1052 aaPredicted RBP4.39□□□□□ -1.71
BRCA2-201ENST00000380152 TM9SF1O15321 606 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 PYGMP11217 842 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 NPR1P16066 1061 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 RPL21P46778 160 aaKnown RBP4.39□□□□□ -1.71
BRCA2-201ENST00000380152 ELF3P78545 371 aaPredicted RBP4.39□□□□□ -1.71
BRCA2-201ENST00000380152 GRB10Q13322 594 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 TFDP1Q14186 410 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 ACAD10Q6JQN1 1059 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 POTEAQ6S8J7 498 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 C1orf131Q8NDD1 294 aaKnown RBP4.39□□□□□ -1.71
BRCA2-201ENST00000380152 GCNAQ96QF7 691 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 ZCWPW1Q9H0M4 648 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 JMJD4Q9H9V9 463 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 HERC5Q9UII4 1024 aaKnown RBP4.39□□□□□ -1.71
BRCA2-201ENST00000380152 LMTK2Q8IWU2 1503 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 SGPL1O95470 568 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 RBP3P10745 1247 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 PSMC3P17980 439 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 COPAP53621 1224 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 HDAC4P56524 1084 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 QPCTQ16769 361 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 ARMCX2Q7L311 632 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 PID1Q7Z2X4 250 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 LRRC6Q86X45 466 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 EXOC8Q8IYI6 725 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 TTC8Q8TAM2 541 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 SCFD1Q8WVM8 642 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 COL15A1P39059 1388 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 RGPD5Q99666 1765 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 SPDYE2BA6NHP3 402 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 SPDYE6P0CI01 402 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 AQP5P55064 265 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 CCDC92Q53HC0 331 aaPredicted RBP4.39□□□□□ -1.71
BRCA2-201ENST00000380152 LAYNQ6UX15 382 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 SMIM5Q71RC9 77 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 ELMO3Q96BJ8 720 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 KIF17Q9P2E2 1029 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 USP21Q9UK80 565 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 KLHL2O95198 593 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 RPA3P35244 121 aaPredicted RBP4.39□□□□□ -1.71
BRCA2-201ENST00000380152 CC2D2BQ6DHV5 1058 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 NT5DC3Q86UY8 548 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 EIF2AQ9BY44 585 aaKnown RBP4.39□□□□□ -1.71
BRCA2-201ENST00000380152 UBAP1LF5GYI3 381 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 PJA2O43164 708 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 SSTR1P30872 391 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 TRIM28Q13263 835 aaKnown RBP4.39□□□□□ -1.71
BRCA2-201ENST00000380152 DTNBP1Q96EV8 351 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 VPS39Q96JC1 886 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 TMEM8AQ9HCN3 771 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 TBC1D23Q9NUY8 699 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 APOL1O14791 398 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 AKAP3O75969 853 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 TRADDQ15628 312 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 IMPG1Q17R60 797 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 C16orf89Q6UX73 402 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 YTHDF3Q7Z739 585 aaKnown RBP4.39□□□□□ -1.71
BRCA2-201ENST00000380152 MRPL4Q9BYD3 311 aaKnown RBP4.39□□□□□ -1.71
BRCA2-201ENST00000380152 KIAA1683Q9H0B3 1180 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 MYLK2Q9H1R3 596 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 TMEM94Q12767 1356 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 USP34Q70CQ2 3546 aa4.39□□□□□ -1.71
BRCA2-201ENST00000380152 STRNO43815 780 aa4.38□□□□□ -1.71
BRCA2-201ENST00000380152 AP1G2O75843 785 aa4.38□□□□□ -1.71
BRCA2-201ENST00000380152 CCDC159P0C7I6 412 aa4.38□□□□□ -1.71
BRCA2-201ENST00000380152 TFDP2Q14188 446 aa4.38□□□□□ -1.71
BRCA2-201ENST00000380152 SURF1Q15526 300 aa4.38□□□□□ -1.71
BRCA2-201ENST00000380152 NRF1Q16656 503 aa4.38□□□□□ -1.71
BRCA2-201ENST00000380152 SIX6OS1Q8N1H7 587 aa4.38□□□□□ -1.71
BRCA2-201ENST00000380152 FAM71DQ8N9W8 422 aa4.38□□□□□ -1.71
BRCA2-201ENST00000380152 SIK2Q9H0K1 926 aa4.38□□□□□ -1.71
BRCA2-201ENST00000380152 IL1RL2Q9HB29 575 aa4.38□□□□□ -1.71
BRCA2-201ENST00000380152 SARS2Q9NP81 518 aaKnown RBP4.38□□□□□ -1.71
BRCA2-201ENST00000380152 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.38□□□□□ -1.71
BRCA2-201ENST00000380152 ZC3H7BQ9UGR2 993 aaKnown RBP4.38□□□□□ -1.71
BRCA2-201ENST00000380152 MID2Q9UJV3 735 aa4.38□□□□□ -1.71
BRCA2-201ENST00000380152 XRN1Q8IZH2 1706 aaKnown RBP4.38□□□□□ -1.71
BRCA2-201ENST00000380152 RCCD1A6NED2 376 aa4.38□□□□□ -1.71
BRCA2-201ENST00000380152 PTPN4P29074 926 aa4.38□□□□□ -1.71
BRCA2-201ENST00000380152 BTNL9Q6UXG8 535 aa4.38□□□□□ -1.71
BRCA2-201ENST00000380152 PPIL6Q8IXY8 311 aa4.38□□□□□ -1.71
BRCA2-201ENST00000380152 PBXIP1Q96AQ6 731 aa4.38□□□□□ -1.71
BRCA2-201ENST00000380152 MPP4Q96JB8 637 aa4.38□□□□□ -1.71
BRCA2-201ENST00000380152 AGPAT3Q9NRZ7 376 aa4.38□□□□□ -1.71
BRCA2-201ENST00000380152 PNMA3Q9UL41 463 aa4.38□□□□□ -1.71
BRCA2-201ENST00000380152 KIF1AQ12756 1690 aa4.38□□□□□ -1.71
BRCA2-201ENST00000380152 H0Y626 953 aa4.38□□□□□ -1.71
BRCA2-201ENST00000380152 DFFAO00273 331 aa4.38□□□□□ -1.71
BRCA2-201ENST00000380152 TRIM16O95361 564 aa4.38□□□□□ -1.71
BRCA2-201ENST00000380152 POLBP06746 335 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms