RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 RGS5O15539 181 aa11.72□□□□□ -0.53
PTCHD1-201ENST00000379361 RPN2P04844 631 aa11.72□□□□□ -0.53
PTCHD1-201ENST00000379361 CDK8P49336 464 aa11.72□□□□□ -0.53
PTCHD1-201ENST00000379361 ORC2Q13416 577 aaPredicted RBP11.72□□□□□ -0.53
PTCHD1-201ENST00000379361 HIBCHQ6NVY1 386 aaPredicted RBP11.72□□□□□ -0.53
PTCHD1-201ENST00000379361 PLEKHG2Q9H7P9 1386 aa11.72□□□□□ -0.53
PTCHD1-201ENST00000379361 MMP10P09238 476 aa11.72□□□□□ -0.53
PTCHD1-201ENST00000379361 STX5Q13190 355 aa11.72□□□□□ -0.53
PTCHD1-201ENST00000379361 ZBTB7BO15156 539 aaPredicted RBP11.72□□□□□ -0.53
PTCHD1-201ENST00000379361 TRIM32Q13049 653 aa11.72□□□□□ -0.53
PTCHD1-201ENST00000379361 PIGUQ9H490 435 aa11.72□□□□□ -0.53
PTCHD1-201ENST00000379361 EXOSC4Q9NPD3 245 aaKnown RBP11.72□□□□□ -0.53
PTCHD1-201ENST00000379361 CACNB1Q02641 598 aaPredicted RBP11.72□□□□□ -0.53
PTCHD1-201ENST00000379361 CYP24A1Q07973 514 aa11.72□□□□□ -0.53
PTCHD1-201ENST00000379361 DAB2IPQ5VWQ8 1189 aa11.72□□□□□ -0.53
PTCHD1-201ENST00000379361 P3H2Q8IVL5 708 aa11.72□□□□□ -0.53
PTCHD1-201ENST00000379361 LCORLQ8N3X6 602 aa11.72□□□□□ -0.53
PTCHD1-201ENST00000379361 LAMC1P11047 1609 aa11.72□□□□□ -0.53
PTCHD1-201ENST00000379361 TRPC5OSA6NMA1 111 aa11.72□□□□□ -0.53
PTCHD1-201ENST00000379361 TTLL13PA6NNM8 815 aa11.72□□□□□ -0.53
PTCHD1-201ENST00000379361 NDUFA10O95299 355 aa11.72□□□□□ -0.53
PTCHD1-201ENST00000379361 TALDO1P37837 337 aa11.72□□□□□ -0.53
PTCHD1-201ENST00000379361 ALDH18A1P54886 795 aaKnown RBP11.72□□□□□ -0.53
PTCHD1-201ENST00000379361 SLC7A5Q01650 507 aa11.72□□□□□ -0.53
PTCHD1-201ENST00000379361 STILQ15468 1287 aa11.72□□□□□ -0.53
PTCHD1-201ENST00000379361 NDUFA5Q16718 116 aa11.72□□□□□ -0.53
PTCHD1-201ENST00000379361 SH3BP5LQ7L8J4 393 aa11.72□□□□□ -0.53
PTCHD1-201ENST00000379361 FLCNQ8NFG4 579 aa11.72□□□□□ -0.53
PTCHD1-201ENST00000379361 CLCC1Q96S66 551 aa11.72□□□□□ -0.53
PTCHD1-201ENST00000379361 EXO5Q9H790 373 aa11.72□□□□□ -0.53
PTCHD1-201ENST00000379361 BCL2L12Q9HB09 334 aa11.72□□□□□ -0.53
PTCHD1-201ENST00000379361 RNF181Q9P0P0 153 aa11.72□□□□□ -0.53
PTCHD1-201ENST00000379361 DNAJC12Q9UKB3 198 aa11.72□□□□□ -0.53
PTCHD1-201ENST00000379361 MAN1B1Q9UKM7 699 aa11.72□□□□□ -0.53
PTCHD1-201ENST00000379361 RGS12O14924 1447 aa11.72□□□□□ -0.53
PTCHD1-201ENST00000379361 C1DQ13901 141 aaKnown RBP11.72□□□□□ -0.53
PTCHD1-201ENST00000379361 ANKRD13CQ8N6S4 541 aa11.72□□□□□ -0.53
PTCHD1-201ENST00000379361 NUP205Q92621 2012 aa11.72□□□□□ -0.53
PTCHD1-201ENST00000379361 ARAP3Q8WWN8 1544 aa11.71□□□□□ -0.53
PTCHD1-201ENST00000379361 PNMA6EA0A0J9YXQ4 647 aa11.71□□□□□ -0.53
PTCHD1-201ENST00000379361 KCNN4O15554 427 aa11.71□□□□□ -0.53
PTCHD1-201ENST00000379361 ACADSBP45954 432 aa11.71□□□□□ -0.53
PTCHD1-201ENST00000379361 KRT24Q2M2I5 525 aa11.71□□□□□ -0.53
PTCHD1-201ENST00000379361 CYFIP1Q7L576 1253 aa11.71□□□□□ -0.53
PTCHD1-201ENST00000379361 WNK4Q96J92 1243 aa11.71□□□□□ -0.53
PTCHD1-201ENST00000379361 SMAD5Q99717 465 aaKnown RBP11.71□□□□□ -0.53
PTCHD1-201ENST00000379361 DOCK9Q9BZ29 2069 aa11.71□□□□□ -0.53
PTCHD1-201ENST00000379361 CASZ1Q86V15 1759 aa11.71□□□□□ -0.53
PTCHD1-201ENST00000379361 USP17L10C9JJH3 530 aa11.71□□□□□ -0.53
PTCHD1-201ENST00000379361 ATP9BO43861 1147 aa11.71□□□□□ -0.53
PTCHD1-201ENST00000379361 CLEC16AQ2KHT3 1053 aa11.71□□□□□ -0.53
PTCHD1-201ENST00000379361 ALG11Q2TAA5 492 aa11.71□□□□□ -0.53
PTCHD1-201ENST00000379361 RABGAP1LQ5R372 815 aa11.71□□□□□ -0.53
PTCHD1-201ENST00000379361 TDRD10Q5VZ19 366 aaKnown RBP11.71□□□□□ -0.53
PTCHD1-201ENST00000379361 EPC1Q9H2F5 836 aa11.71□□□□□ -0.53
PTCHD1-201ENST00000379361 ENOPH1Q9UHY7 261 aa11.71□□□□□ -0.53
PTCHD1-201ENST00000379361 EP300Q09472 2414 aaPredicted RBP11.71□□□□□ -0.53
PTCHD1-201ENST00000379361 IL13P35225 146 aa11.71□□□□□ -0.53
PTCHD1-201ENST00000379361 ALKBH5Q6P6C2 394 aaKnown RBP11.71□□□□□ -0.53
PTCHD1-201ENST00000379361 ATP7AQ04656 1500 aa11.71□□□□□ -0.53
PTCHD1-201ENST00000379361 LRRC14BA6NHZ5 514 aa11.71□□□□□ -0.53
PTCHD1-201ENST00000379361 STAG3L1P0CL83 205 aa11.71□□□□□ -0.53
PTCHD1-201ENST00000379361 RFX3P48380 749 aa11.71□□□□□ -0.53
PTCHD1-201ENST00000379361 LIMA1Q9UHB6 759 aaKnown RBP11.71□□□□□ -0.53
PTCHD1-201ENST00000379361 SCN1AP35498 2009 aa11.71□□□□□ -0.53
PTCHD1-201ENST00000379361 PIGHQ14442 188 aaPredicted RBP11.71□□□□□ -0.53
PTCHD1-201ENST00000379361 NBPF15Q8N660 670 aa11.71□□□□□ -0.53
PTCHD1-201ENST00000379361 SERHL2Q9H4I8 314 aa11.71□□□□□ -0.53
PTCHD1-201ENST00000379361 SERHLQ9NQF3 203 aa11.71□□□□□ -0.53
PTCHD1-201ENST00000379361 KLHL20Q9Y2M5 609 aa11.71□□□□□ -0.53
PTCHD1-201ENST00000379361 GADD45BO75293 160 aaPredicted RBP11.71□□□□□ -0.53
PTCHD1-201ENST00000379361 VN1R5Q7Z5H4 357 aa11.71□□□□□ -0.53
PTCHD1-201ENST00000379361 RASGRP4Q8TDF6 673 aa11.71□□□□□ -0.53
PTCHD1-201ENST00000379361 THOC1Q96FV9 657 aaKnown RBP11.71□□□□□ -0.53
PTCHD1-201ENST00000379361 MCCC1Q96RQ3 725 aaPredicted RBP11.71□□□□□ -0.53
PTCHD1-201ENST00000379361 EIF3LQ9Y262 564 aaKnown RBP11.71□□□□□ -0.53
PTCHD1-201ENST00000379361 GNG14A0A1W2PPG7 69 aa11.71□□□□□ -0.54
PTCHD1-201ENST00000379361 FLT3P36888 993 aa11.71□□□□□ -0.54
PTCHD1-201ENST00000379361 FNTAP49354 379 aa11.71□□□□□ -0.54
PTCHD1-201ENST00000379361 C19orf18Q8NEA5 215 aa11.71□□□□□ -0.54
PTCHD1-201ENST00000379361 CNDP1Q96KN2 507 aa11.71□□□□□ -0.54
PTCHD1-201ENST00000379361 SIKE1Q9BRV8 207 aa11.71□□□□□ -0.54
PTCHD1-201ENST00000379361 LGR6Q9HBX8 967 aa11.71□□□□□ -0.54
PTCHD1-201ENST00000379361 WDR35Q9P2L0 1181 aa11.71□□□□□ -0.54
PTCHD1-201ENST00000379361 PPIEQ9UNP9 301 aaKnown RBP11.71□□□□□ -0.54
PTCHD1-201ENST00000379361 SOAT2O75908 522 aa11.71□□□□□ -0.54
PTCHD1-201ENST00000379361 NOS3P29474 1203 aa11.71□□□□□ -0.54
PTCHD1-201ENST00000379361 CRKP46108 304 aa11.71□□□□□ -0.54
PTCHD1-201ENST00000379361 SLC11A2P49281 568 aa11.71□□□□□ -0.54
PTCHD1-201ENST00000379361 GRAPQ13588 217 aa11.71□□□□□ -0.54
PTCHD1-201ENST00000379361 PWP1Q13610 501 aa11.71□□□□□ -0.54
PTCHD1-201ENST00000379361 SLC44A4Q53GD3 710 aa11.71□□□□□ -0.54
PTCHD1-201ENST00000379361 HERC6Q8IVU3 1022 aa11.71□□□□□ -0.54
PTCHD1-201ENST00000379361 GRAPLQ8TC17 118 aaPredicted RBP11.71□□□□□ -0.54
PTCHD1-201ENST00000379361 HERC5Q9UII4 1024 aaKnown RBP11.71□□□□□ -0.54
PTCHD1-201ENST00000379361 GRID2IPA4D2P6 1211 aa11.71□□□□□ -0.54
PTCHD1-201ENST00000379361 ZNF827Q17R98 1081 aa11.71□□□□□ -0.54
PTCHD1-201ENST00000379361 S100A13Q99584 98 aa11.71□□□□□ -0.54
PTCHD1-201ENST00000379361 NDST4Q9H3R1 872 aa11.71□□□□□ -0.54
PTCHD1-201ENST00000379361 SF3B1O75533 1304 aaKnown RBP eCLIP11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms