RNA–Protein interactions for RNA: ENST00000378910.9

NPHS1-202, Transcript of NPHS1, nephrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHS1, Length 4,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1-202ENST00000378910 AGPAT1Q99943 283 aa12.4□□□□□ -0.43
NPHS1-202ENST00000378910 PAGR1Q9BTK6 254 aa12.4□□□□□ -0.43
NPHS1-202ENST00000378910 MRPL46Q9H2W6 279 aaKnown RBP12.4□□□□□ -0.43
NPHS1-202ENST00000378910 MINPP1Q9UNW1 487 aa12.4□□□□□ -0.43
NPHS1-202ENST00000378910 CAB39Q9Y376 341 aaPredicted RBP12.4□□□□□ -0.43
NPHS1-202ENST00000378910 TOM1L1O75674 476 aa12.39□□□□□ -0.43
NPHS1-202ENST00000378910 TJP3O95049 919 aa12.39□□□□□ -0.43
NPHS1-202ENST00000378910 TMEM253P0C7T8 217 aa12.39□□□□□ -0.43
NPHS1-202ENST00000378910 ITGA4P13612 1032 aa12.39□□□□□ -0.43
NPHS1-202ENST00000378910 POLR2BP30876 1174 aaKnown RBP12.39□□□□□ -0.43
NPHS1-202ENST00000378910 ARHGAP4P98171 946 aa12.39□□□□□ -0.43
NPHS1-202ENST00000378910 NACC2Q96BF6 587 aa12.39□□□□□ -0.43
NPHS1-202ENST00000378910 ZNF577Q9BSK1 485 aa12.39□□□□□ -0.43
NPHS1-202ENST00000378910 LRRIQ4A6NIV6 560 aa12.39□□□□□ -0.43
NPHS1-202ENST00000378910 ZSCAN5BA6NJL1 495 aa12.39□□□□□ -0.43
NPHS1-202ENST00000378910 GOLGA8SH3BPF8 625 aa12.39□□□□□ -0.43
NPHS1-202ENST00000378910 RGL2O15211 777 aa12.39□□□□□ -0.43
NPHS1-202ENST00000378910 PIK3CAP42336 1068 aa12.39□□□□□ -0.43
NPHS1-202ENST00000378910 CD97P48960 835 aa12.39□□□□□ -0.43
NPHS1-202ENST00000378910 DMP1Q13316 513 aaPredicted RBP12.39□□□□□ -0.43
NPHS1-202ENST00000378910 SMU1Q2TAY7 513 aa12.39□□□□□ -0.43
NPHS1-202ENST00000378910 LACTB2Q53H82 288 aaPredicted RBP12.39□□□□□ -0.43
NPHS1-202ENST00000378910 ATG16L1Q676U5 607 aa12.39□□□□□ -0.43
NPHS1-202ENST00000378910 CHURC1Q8WUH1 139 aa12.39□□□□□ -0.43
NPHS1-202ENST00000378910 RNF25Q96BH1 459 aaPredicted RBP12.39□□□□□ -0.43
NPHS1-202ENST00000378910 FERD3LQ96RJ6 166 aa12.39□□□□□ -0.43
NPHS1-202ENST00000378910 SENP1Q9P0U3 644 aa12.39□□□□□ -0.43
NPHS1-202ENST00000378910 SRRM3A6NNA2 597 aaPredicted RBP12.39□□□□□ -0.43
NPHS1-202ENST00000378910 CLDN3O15551 220 aa12.39□□□□□ -0.43
NPHS1-202ENST00000378910 ARHGEF9O43307 516 aa12.39□□□□□ -0.43
NPHS1-202ENST00000378910 ASLP04424 464 aa12.39□□□□□ -0.43
NPHS1-202ENST00000378910 PGM1P36871 562 aa12.39□□□□□ -0.43
NPHS1-202ENST00000378910 LRRC36Q1X8D7 754 aa12.39□□□□□ -0.43
NPHS1-202ENST00000378910 C12orf60Q5U649 245 aa12.39□□□□□ -0.43
NPHS1-202ENST00000378910 KRT80Q6KB66 452 aa12.39□□□□□ -0.43
NPHS1-202ENST00000378910 SCYL2Q6P3W7 929 aa12.39□□□□□ -0.43
NPHS1-202ENST00000378910 SUPT20HQ8NEM7 779 aa12.39□□□□□ -0.43
NPHS1-202ENST00000378910 SMYD3Q9H7B4 428 aa12.39□□□□□ -0.43
NPHS1-202ENST00000378910 METTL5Q9NRN9 209 aaKnown RBP12.39□□□□□ -0.43
NPHS1-202ENST00000378910 TMEM221A6NGB7 291 aa12.38□□□□□ -0.43
NPHS1-202ENST00000378910 TTC34A8MYJ7 566 aa12.38□□□□□ -0.43
NPHS1-202ENST00000378910 COPEO14579 308 aa12.38□□□□□ -0.43
NPHS1-202ENST00000378910 ZBTB5O15062 677 aa12.38□□□□□ -0.43
NPHS1-202ENST00000378910 BAIAP3O94812 1187 aa12.38□□□□□ -0.43
NPHS1-202ENST00000378910 KRT19P08727 400 aa12.38□□□□□ -0.43
NPHS1-202ENST00000378910 ITIH2P19823 946 aa12.38□□□□□ -0.43
NPHS1-202ENST00000378910 EPHB1P54762 984 aa12.38□□□□□ -0.43
NPHS1-202ENST00000378910 DNAJC3Q13217 504 aa12.38□□□□□ -0.43
NPHS1-202ENST00000378910 GEN1Q17RS7 908 aa12.38□□□□□ -0.43
NPHS1-202ENST00000378910 BRDTQ58F21 947 aaPredicted RBP12.38□□□□□ -0.43
NPHS1-202ENST00000378910 RFX6Q8HWS3 928 aa12.38□□□□□ -0.43
NPHS1-202ENST00000378910 CRLF3Q8IUI8 442 aa12.38□□□□□ -0.43
NPHS1-202ENST00000378910 C4orf33Q8N1A6 199 aa12.38□□□□□ -0.43
NPHS1-202ENST00000378910 ICA1LQ8NDH6 482 aa12.38□□□□□ -0.43
NPHS1-202ENST00000378910 ZNF507Q8TCN5 953 aa12.38□□□□□ -0.43
NPHS1-202ENST00000378910 FAM84BQ96KN1 310 aaPredicted RBP12.38□□□□□ -0.43
NPHS1-202ENST00000378910 CDCA7Q9BWT1 371 aaPredicted RBP12.38□□□□□ -0.43
NPHS1-202ENST00000378910 SNX25Q9H3E2 840 aa12.38□□□□□ -0.43
NPHS1-202ENST00000378910 NPHS2Q9NP85 383 aa12.38□□□□□ -0.43
NPHS1-202ENST00000378910 TBCCD1Q9NVR7 557 aa12.38□□□□□ -0.43
NPHS1-202ENST00000378910 CYP39A1Q9NYL5 469 aa12.38□□□□□ -0.43
NPHS1-202ENST00000378910 MRPL11Q9Y3B7 192 aaKnown RBP12.38□□□□□ -0.43
NPHS1-202ENST00000378910 TSPAN1O60635 241 aa12.38□□□□□ -0.43
NPHS1-202ENST00000378910 HNRNPCL1O60812 293 aaKnown RBP12.38□□□□□ -0.43
NPHS1-202ENST00000378910 CYP2C9P11712 490 aa12.38□□□□□ -0.43
NPHS1-202ENST00000378910 CCNCP24863 283 aa12.38□□□□□ -0.43
NPHS1-202ENST00000378910 CASP7P55210 303 aa12.38□□□□□ -0.43
NPHS1-202ENST00000378910 ARL4CP56559 192 aa12.38□□□□□ -0.43
NPHS1-202ENST00000378910 C21orf59P57076 290 aa12.38□□□□□ -0.43
NPHS1-202ENST00000378910 NUP107P57740 925 aa12.38□□□□□ -0.43
NPHS1-202ENST00000378910 STX3Q13277 289 aa12.38□□□□□ -0.43
NPHS1-202ENST00000378910 METTL21CQ5VZV1 264 aa12.38□□□□□ -0.43
NPHS1-202ENST00000378910 DNAJC24Q6P3W2 148 aa12.38□□□□□ -0.43
NPHS1-202ENST00000378910 TRAF7Q6Q0C0 670 aa12.38□□□□□ -0.43
NPHS1-202ENST00000378910 TMC3Q7Z5M5 1100 aa12.38□□□□□ -0.43
NPHS1-202ENST00000378910 CD302Q8IX05 232 aa12.38□□□□□ -0.43
NPHS1-202ENST00000378910 ZBED8Q8IZ13 594 aa12.38□□□□□ -0.43
NPHS1-202ENST00000378910 HDAC2Q92769 488 aaKnown RBP12.38□□□□□ -0.43
NPHS1-202ENST00000378910 NSUN4Q96CB9 384 aaKnown RBP12.38□□□□□ -0.43
NPHS1-202ENST00000378910 DNAJC1Q96KC8 554 aaKnown RBP12.38□□□□□ -0.43
NPHS1-202ENST00000378910 ALG13Q9NP73 1137 aaKnown RBP12.38□□□□□ -0.43
NPHS1-202ENST00000378910 GOLGA8RI6L899 631 aa12.38□□□□□ -0.43
NPHS1-202ENST00000378910 ASAP2O43150 1006 aa12.38□□□□□ -0.43
NPHS1-202ENST00000378910 PJA2O43164 708 aa12.38□□□□□ -0.43
NPHS1-202ENST00000378910 CCDC22O60826 627 aa12.38□□□□□ -0.43
NPHS1-202ENST00000378910 TARSP26639 723 aaKnown RBP12.38□□□□□ -0.43
NPHS1-202ENST00000378910 SERPINB1P30740 379 aa12.38□□□□□ -0.43
NPHS1-202ENST00000378910 HOXA13P31271 388 aaPredicted RBP12.38□□□□□ -0.43
NPHS1-202ENST00000378910 ASPHQ12797 758 aa12.38□□□□□ -0.43
NPHS1-202ENST00000378910 CLEC4GQ6UXB4 293 aa12.38□□□□□ -0.43
NPHS1-202ENST00000378910 NAT14Q8WUY8 206 aa12.38□□□□□ -0.43
NPHS1-202ENST00000378910 DGCR14Q96DF8 476 aaKnown RBP12.38□□□□□ -0.43
NPHS1-202ENST00000378910 GIN1Q9NXP7 522 aa12.38□□□□□ -0.43
NPHS1-202ENST00000378910 MRPL39Q9NYK5 338 aaKnown RBP12.38□□□□□ -0.43
NPHS1-202ENST00000378910 KIDINS220Q9ULH0 1771 aa12.38□□□□□ -0.43
NPHS1-202ENST00000378910 SLIT1O75093 1534 aa12.38□□□□□ -0.43
NPHS1-202ENST00000378910 ATP2B4P23634 1241 aa12.37□□□□□ -0.43
NPHS1-202ENST00000378910 POU5F1Q01860 360 aaKnown RBP12.37□□□□□ -0.43
NPHS1-202ENST00000378910 GPS1Q13098 491 aa12.37□□□□□ -0.43
NPHS1-202ENST00000378910 ZNF268Q14587 947 aaPredicted RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms