RNA–Protein interactions for RNA: ENST00000378823.7

RAD50-201, Transcript of RAD50 double strand break repair protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAD50, Length 8,306 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-201ENST00000378823 TMEM120BA0PK00 339 aa11.72□□□□□ -0.53
RAD50-201ENST00000378823 PHF20L1A8MW92 1017 aa11.72□□□□□ -0.53
RAD50-201ENST00000378823 H0YC42 278 aa11.72□□□□□ -0.53
RAD50-201ENST00000378823 EYA4O95677 639 aa11.72□□□□□ -0.53
RAD50-201ENST00000378823 CYBBP04839 570 aa11.72□□□□□ -0.53
RAD50-201ENST00000378823 CDC42EP1Q00587 391 aa11.72□□□□□ -0.53
RAD50-201ENST00000378823 TBL3Q12788 808 aaKnown RBP11.72□□□□□ -0.53
RAD50-201ENST00000378823 SUSD4Q5VX71 490 aa11.72□□□□□ -0.53
RAD50-201ENST00000378823 BBS7Q8IWZ6 715 aa11.72□□□□□ -0.53
RAD50-201ENST00000378823 DIABLOQ9NR28 239 aa11.72□□□□□ -0.53
RAD50-201ENST00000378823 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.72□□□□□ -0.53
RAD50-201ENST00000378823 FDX1P10109 184 aa11.72□□□□□ -0.53
RAD50-201ENST00000378823 WLSQ5T9L3 541 aa11.72□□□□□ -0.53
RAD50-201ENST00000378823 P3H2Q8IVL5 708 aa11.72□□□□□ -0.53
RAD50-201ENST00000378823 ECSITQ9BQ95 431 aa11.72□□□□□ -0.53
RAD50-201ENST00000378823 GOLPH3Q9H4A6 298 aa11.72□□□□□ -0.53
RAD50-201ENST00000378823 DTNAQ9Y4J8 743 aa11.72□□□□□ -0.53
RAD50-201ENST00000378823 LOC102724159A0A0B4J2E5 919 aa11.72□□□□□ -0.53
RAD50-201ENST00000378823 A0A1B0GTH6 734 aa11.72□□□□□ -0.53
RAD50-201ENST00000378823 TMEM132DQ14C87 1099 aa11.72□□□□□ -0.53
RAD50-201ENST00000378823 PWP2Q15269 919 aaKnown RBP11.72□□□□□ -0.53
RAD50-201ENST00000378823 ROPN1BQ9BZX4 212 aaPredicted RBP11.72□□□□□ -0.53
RAD50-201ENST00000378823 ROPN1Q9HAT0 212 aaPredicted RBP11.72□□□□□ -0.53
RAD50-201ENST00000378823 RGS5O15539 181 aa11.72□□□□□ -0.53
RAD50-201ENST00000378823 ALX1Q15699 326 aa11.72□□□□□ -0.53
RAD50-201ENST00000378823 PRDM5Q9NQX1 630 aaPredicted RBP11.72□□□□□ -0.53
RAD50-201ENST00000378823 KRT84Q9NSB2 600 aa11.72□□□□□ -0.53
RAD50-201ENST00000378823 KCND2Q9NZV8 630 aa11.72□□□□□ -0.53
RAD50-201ENST00000378823 CCT8L1PA6NM43 557 aa11.72□□□□□ -0.53
RAD50-201ENST00000378823 PP2D1A8MPX8 630 aa11.72□□□□□ -0.53
RAD50-201ENST00000378823 RSPH10B2B2RC85 870 aa11.72□□□□□ -0.53
RAD50-201ENST00000378823 RASSF9O75901 435 aa11.72□□□□□ -0.53
RAD50-201ENST00000378823 RSPH10BP0C881 870 aa11.72□□□□□ -0.53
RAD50-201ENST00000378823 PSMA3P25788 255 aa11.72□□□□□ -0.53
RAD50-201ENST00000378823 NPEPPSP55786 919 aa11.72□□□□□ -0.53
RAD50-201ENST00000378823 LVRNQ6Q4G3 990 aa11.72□□□□□ -0.53
RAD50-201ENST00000378823 HDDC2Q7Z4H3 204 aa11.72□□□□□ -0.53
RAD50-201ENST00000378823 C2orf69Q8N8R5 385 aa11.72□□□□□ -0.53
RAD50-201ENST00000378823 RNF149Q8NC42 400 aa11.72□□□□□ -0.53
RAD50-201ENST00000378823 SLC44A5Q8NCS7 719 aa11.72□□□□□ -0.53
RAD50-201ENST00000378823 NEO1Q92859 1461 aa11.72□□□□□ -0.53
RAD50-201ENST00000378823 HES6Q96HZ4 224 aa11.72□□□□□ -0.53
RAD50-201ENST00000378823 TRIM9Q9C026 710 aa11.72□□□□□ -0.53
RAD50-201ENST00000378823 MANSC1Q9H8J5 431 aa11.72□□□□□ -0.53
RAD50-201ENST00000378823 PAK5Q9P286 719 aa11.72□□□□□ -0.53
RAD50-201ENST00000378823 HERC5Q9UII4 1024 aaKnown RBP11.72□□□□□ -0.53
RAD50-201ENST00000378823 ERBB3P21860 1342 aa11.71□□□□□ -0.53
RAD50-201ENST00000378823 TUBGCP3Q96CW5 907 aa11.71□□□□□ -0.53
RAD50-201ENST00000378823 CCSER1Q9C0I3 900 aa11.71□□□□□ -0.53
RAD50-201ENST00000378823 NDEL1Q9GZM8 345 aa11.71□□□□□ -0.53
RAD50-201ENST00000378823 MUC3BQ9H195 1237 aa11.71□□□□□ -0.53
RAD50-201ENST00000378823 AP4S1Q9Y587 144 aa11.71□□□□□ -0.53
RAD50-201ENST00000378823 PALLDQ8WX93 1383 aa11.71□□□□□ -0.53
RAD50-201ENST00000378823 SNRPAP09012 282 aaKnown RBP11.71□□□□□ -0.53
RAD50-201ENST00000378823 MLH1P40692 756 aa11.71□□□□□ -0.53
RAD50-201ENST00000378823 ACAD9Q9H845 621 aa11.71□□□□□ -0.53
RAD50-201ENST00000378823 VIRMAQ69YN4 1812 aaKnown RBP11.71□□□□□ -0.53
RAD50-201ENST00000378823 UBXN8O00124 270 aa11.71□□□□□ -0.53
RAD50-201ENST00000378823 SLC26A4O43511 780 aa11.71□□□□□ -0.53
RAD50-201ENST00000378823 SLC9A5Q14940 896 aa11.71□□□□□ -0.53
RAD50-201ENST00000378823 STILQ15468 1287 aa11.71□□□□□ -0.53
RAD50-201ENST00000378823 FGD2Q7Z6J4 655 aa11.71□□□□□ -0.53
RAD50-201ENST00000378823 DDX53Q86TM3 631 aaKnown RBP11.71□□□□□ -0.53
RAD50-201ENST00000378823 C4orf33Q8N1A6 199 aa11.71□□□□□ -0.53
RAD50-201ENST00000378823 PIGBQ92521 554 aa11.71□□□□□ -0.53
RAD50-201ENST00000378823 SPATA16Q9BXB7 569 aa11.71□□□□□ -0.53
RAD50-201ENST00000378823 BBS2Q9BXC9 721 aa11.71□□□□□ -0.53
RAD50-201ENST00000378823 CXorf56Q9H5V9 222 aa11.71□□□□□ -0.53
RAD50-201ENST00000378823 RNF103O00237 685 aa11.71□□□□□ -0.53
RAD50-201ENST00000378823 UCHL3P15374 230 aa11.71□□□□□ -0.53
RAD50-201ENST00000378823 ATXN3P54252 364 aaPredicted RBP11.71□□□□□ -0.53
RAD50-201ENST00000378823 NR1I3Q14994 352 aa11.71□□□□□ -0.53
RAD50-201ENST00000378823 SNRNP35Q16560 246 aaKnown RBP11.71□□□□□ -0.53
RAD50-201ENST00000378823 SGMS1Q86VZ5 419 aa11.71□□□□□ -0.53
RAD50-201ENST00000378823 NSL1Q96IY1 281 aa11.71□□□□□ -0.53
RAD50-201ENST00000378823 VPS50Q96JG6 964 aa11.71□□□□□ -0.53
RAD50-201ENST00000378823 RGL1Q9NZL6 768 aa11.71□□□□□ -0.53
RAD50-201ENST00000378823 NAA30Q147X3 362 aaPredicted RBP11.71□□□□□ -0.54
RAD50-201ENST00000378823 TTC33Q6PID6 262 aaPredicted RBP11.71□□□□□ -0.54
RAD50-201ENST00000378823 NFKBIL1Q9UBC1 381 aaPredicted RBP11.71□□□□□ -0.54
RAD50-201ENST00000378823 ZNF521Q96K83 1311 aa11.71□□□□□ -0.54
RAD50-201ENST00000378823 TDP2O95551 362 aa11.71□□□□□ -0.54
RAD50-201ENST00000378823 APOA4P06727 396 aa11.71□□□□□ -0.54
RAD50-201ENST00000378823 GALCP54803 685 aa11.71□□□□□ -0.54
RAD50-201ENST00000378823 CACNB2Q08289 660 aaPredicted RBP11.71□□□□□ -0.54
RAD50-201ENST00000378823 RINLQ6ZS11 566 aa11.71□□□□□ -0.54
RAD50-201ENST00000378823 ADCK2Q7Z695 626 aa11.71□□□□□ -0.54
RAD50-201ENST00000378823 TMEM117Q9H0C3 514 aa11.71□□□□□ -0.54
RAD50-201ENST00000378823 CATSPERBQ9H7T0 1116 aa11.71□□□□□ -0.54
RAD50-201ENST00000378823 C6orf203Q9P0P8 240 aaPredicted RBP11.71□□□□□ -0.54
RAD50-201ENST00000378823 H2AFYO75367 372 aaKnown RBP11.71□□□□□ -0.54
RAD50-201ENST00000378823 COPAP53621 1224 aa11.71□□□□□ -0.54
RAD50-201ENST00000378823 KCNK10P57789 538 aa11.71□□□□□ -0.54
RAD50-201ENST00000378823 NAB2Q15742 525 aa11.71□□□□□ -0.54
RAD50-201ENST00000378823 PCSK7Q16549 785 aa11.71□□□□□ -0.54
RAD50-201ENST00000378823 QRICH1Q2TAL8 776 aa11.71□□□□□ -0.54
RAD50-201ENST00000378823 PTRHD1Q6GMV3 140 aaKnown RBP11.71□□□□□ -0.54
RAD50-201ENST00000378823 MICU2Q8IYU8 434 aa11.71□□□□□ -0.54
RAD50-201ENST00000378823 SNX31Q8N9S9 440 aa11.71□□□□□ -0.54
RAD50-201ENST00000378823 ZNF280CQ8ND82 737 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms