RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 LINC01565O15544 149 aa12.6□□□□□ -0.39
DEPDC4-202ENST00000378244 HUS1O60921 280 aa12.6□□□□□ -0.39
DEPDC4-202ENST00000378244 GNA14O95837 355 aa12.6□□□□□ -0.39
DEPDC4-202ENST00000378244 ODC1P11926 461 aa12.6□□□□□ -0.39
DEPDC4-202ENST00000378244 OR1D2P34982 312 aa12.6□□□□□ -0.39
DEPDC4-202ENST00000378244 AARSP49588 968 aaKnown RBP eCLIP12.6□□□□□ -0.39
DEPDC4-202ENST00000378244 MYL5Q02045 173 aa12.6□□□□□ -0.39
DEPDC4-202ENST00000378244 HYAL1Q12794 435 aa12.6□□□□□ -0.39
DEPDC4-202ENST00000378244 LRMPQ12912 555 aa12.6□□□□□ -0.39
DEPDC4-202ENST00000378244 CTXN3Q4LDR2 81 aa12.6□□□□□ -0.39
DEPDC4-202ENST00000378244 SCARA5Q6ZMJ2 495 aa12.6□□□□□ -0.39
DEPDC4-202ENST00000378244 TRIM59Q8IWR1 403 aa12.6□□□□□ -0.39
DEPDC4-202ENST00000378244 PPP2R3CQ969Q6 453 aa12.6□□□□□ -0.39
DEPDC4-202ENST00000378244 FUCA2Q9BTY2 467 aa12.6□□□□□ -0.39
DEPDC4-202ENST00000378244 XYLT2Q9H1B5 865 aa12.6□□□□□ -0.39
DEPDC4-202ENST00000378244 TMEM8AQ9HCN3 771 aa12.6□□□□□ -0.39
DEPDC4-202ENST00000378244 MAGEC2Q9UBF1 373 aaPredicted RBP12.6□□□□□ -0.39
DEPDC4-202ENST00000378244 POLIQ9UNA4 740 aa12.6□□□□□ -0.39
DEPDC4-202ENST00000378244 SYN3O14994 580 aa12.59□□□□□ -0.39
DEPDC4-202ENST00000378244 HCRTO43612 131 aa12.59□□□□□ -0.39
DEPDC4-202ENST00000378244 LILRB3O75022 631 aa12.59□□□□□ -0.39
DEPDC4-202ENST00000378244 OR4Q2P0C623 313 aa12.59□□□□□ -0.39
DEPDC4-202ENST00000378244 POU3F3P20264 500 aaPredicted RBP12.59□□□□□ -0.39
DEPDC4-202ENST00000378244 KCNH2Q12809 1159 aa12.59□□□□□ -0.39
DEPDC4-202ENST00000378244 OVOS1Q6IE37 1185 aa12.59□□□□□ -0.39
DEPDC4-202ENST00000378244 C15orf39Q6ZRI6 1047 aa12.59□□□□□ -0.39
DEPDC4-202ENST00000378244 APPL2Q8NEU8 664 aa12.59□□□□□ -0.39
DEPDC4-202ENST00000378244 PIK3R5Q8WYR1 880 aa12.59□□□□□ -0.39
DEPDC4-202ENST00000378244 SEMA4DQ92854 862 aa12.59□□□□□ -0.39
DEPDC4-202ENST00000378244 KLHL5Q96PQ7 755 aa12.59□□□□□ -0.39
DEPDC4-202ENST00000378244 CLSTN3Q9BQT9 956 aa12.59□□□□□ -0.39
DEPDC4-202ENST00000378244 EMILIN2Q9BXX0 1053 aa12.59□□□□□ -0.39
DEPDC4-202ENST00000378244 CLDND1Q9NY35 253 aa12.59□□□□□ -0.39
DEPDC4-202ENST00000378244 STK39Q9UEW8 545 aa12.59□□□□□ -0.39
DEPDC4-202ENST00000378244 PCDHB8Q9UN66 801 aa12.59□□□□□ -0.39
DEPDC4-202ENST00000378244 L1RE1Q9UN81 338 aa12.59□□□□□ -0.39
DEPDC4-202ENST00000378244 HCFC2Q9Y5Z7 792 aa12.59□□□□□ -0.39
DEPDC4-202ENST00000378244 IRAK3Q9Y616 596 aa12.59□□□□□ -0.39
DEPDC4-202ENST00000378244 KCNJ18B7U540 433 aa12.59□□□□□ -0.39
DEPDC4-202ENST00000378244 FMO5P49326 533 aa12.59□□□□□ -0.39
DEPDC4-202ENST00000378244 CDH8P55286 799 aa12.59□□□□□ -0.39
DEPDC4-202ENST00000378244 KCNJ12Q14500 433 aa12.59□□□□□ -0.39
DEPDC4-202ENST00000378244 SOWAHAQ2M3V2 549 aa12.59□□□□□ -0.39
DEPDC4-202ENST00000378244 CT47A1Q5JQC4 288 aaPredicted RBP12.59□□□□□ -0.39
DEPDC4-202ENST00000378244 PDE12Q6L8Q7 609 aaKnown RBP12.59□□□□□ -0.39
DEPDC4-202ENST00000378244 ANKS3Q6ZW76 656 aa12.59□□□□□ -0.39
DEPDC4-202ENST00000378244 PDCL2Q8N4E4 241 aa12.59□□□□□ -0.39
DEPDC4-202ENST00000378244 FBXL13Q8NEE6 735 aa12.59□□□□□ -0.39
DEPDC4-202ENST00000378244 CRACR2AQ9BSW2 395 aa12.59□□□□□ -0.39
DEPDC4-202ENST00000378244 IMPG2Q9BZV3 1241 aa12.59□□□□□ -0.39
DEPDC4-202ENST00000378244 THAP9Q9H5L6 903 aa12.59□□□□□ -0.39
DEPDC4-202ENST00000378244 PRDM6Q9NQX0 595 aa12.59□□□□□ -0.39
DEPDC4-202ENST00000378244 STX10O60499 249 aa12.58□□□□□ -0.4
DEPDC4-202ENST00000378244 EPCAMP16422 314 aa12.58□□□□□ -0.4
DEPDC4-202ENST00000378244 RAP1GAPP47736 663 aa12.58□□□□□ -0.4
DEPDC4-202ENST00000378244 TNNC1P63316 161 aa12.58□□□□□ -0.4
DEPDC4-202ENST00000378244 SGSM1Q2NKQ1 1148 aa12.58□□□□□ -0.4
DEPDC4-202ENST00000378244 ZNF667Q5HYK9 610 aa12.58□□□□□ -0.4
DEPDC4-202ENST00000378244 APOL5Q9BWW9 433 aa12.58□□□□□ -0.4
DEPDC4-202ENST00000378244 RAB20Q9NX57 234 aa12.58□□□□□ -0.4
DEPDC4-202ENST00000378244 FBXL5Q9UKA1 691 aa12.58□□□□□ -0.4
DEPDC4-202ENST00000378244 STXBP5LQ9Y2K9 1186 aa12.58□□□□□ -0.4
DEPDC4-202ENST00000378244 SPDYE4A6NLX3 237 aa12.57□□□□□ -0.4
DEPDC4-202ENST00000378244 BECN2A8MW95 431 aa12.57□□□□□ -0.4
DEPDC4-202ENST00000378244 CLASP2O75122 1294 aaKnown RBP12.57□□□□□ -0.4
DEPDC4-202ENST00000378244 AFPP02771 609 aaKnown RBP12.57□□□□□ -0.4
DEPDC4-202ENST00000378244 ADH1AP07327 375 aa12.57□□□□□ -0.4
DEPDC4-202ENST00000378244 WEE2P0C1S8 567 aa12.57□□□□□ -0.4
DEPDC4-202ENST00000378244 CPB1P15086 417 aa12.57□□□□□ -0.4
DEPDC4-202ENST00000378244 CDK11BP21127 795 aaKnown RBP12.57□□□□□ -0.4
DEPDC4-202ENST00000378244 ACAT1P24752 427 aaKnown RBP12.57□□□□□ -0.4
DEPDC4-202ENST00000378244 MARSP56192 900 aaKnown RBP12.57□□□□□ -0.4
DEPDC4-202ENST00000378244 MYL7Q01449 175 aa12.57□□□□□ -0.4
DEPDC4-202ENST00000378244 DLX2Q07687 328 aaPredicted RBP12.57□□□□□ -0.4
DEPDC4-202ENST00000378244 NCAPHQ15003 741 aa12.57□□□□□ -0.4
DEPDC4-202ENST00000378244 ZNF280DQ6N043 979 aa12.57□□□□□ -0.4
DEPDC4-202ENST00000378244 LUZP1Q86V48 1076 aa12.57□□□□□ -0.4
DEPDC4-202ENST00000378244 METTL23Q86XA0 190 aa12.57□□□□□ -0.4
DEPDC4-202ENST00000378244 FAM114A1Q8IWE2 563 aa12.57□□□□□ -0.4
DEPDC4-202ENST00000378244 VN1R2Q8NFZ6 395 aa12.57□□□□□ -0.4
DEPDC4-202ENST00000378244 PGLYRP2Q96PD5 576 aa12.57□□□□□ -0.4
DEPDC4-202ENST00000378244 TMEM209Q96SK2 561 aa12.57□□□□□ -0.4
DEPDC4-202ENST00000378244 TUBGCP2Q9BSJ2 902 aa12.57□□□□□ -0.4
DEPDC4-202ENST00000378244 BARX2Q9UMQ3 279 aaPredicted RBP12.57□□□□□ -0.4
DEPDC4-202ENST00000378244 SSX2IPQ9Y2D8 614 aa12.57□□□□□ -0.4
DEPDC4-202ENST00000378244 H3BQ06 376 aaPredicted RBP12.57□□□□□ -0.4
DEPDC4-202ENST00000378244 ASS1P00966 412 aaKnown RBP12.57□□□□□ -0.4
DEPDC4-202ENST00000378244 PDGFRBP09619 1106 aa12.57□□□□□ -0.4
DEPDC4-202ENST00000378244 ATP1A3P13637 1013 aa12.57□□□□□ -0.4
DEPDC4-202ENST00000378244 GTF2H1P32780 548 aa12.57□□□□□ -0.4
DEPDC4-202ENST00000378244 NOP14P78316 857 aaKnown RBP12.57□□□□□ -0.4
DEPDC4-202ENST00000378244 CLUL1Q15846 466 aa12.57□□□□□ -0.4
DEPDC4-202ENST00000378244 CCDC142Q17RM4 750 aa12.57□□□□□ -0.4
DEPDC4-202ENST00000378244 TCP11X2Q5H9J9 407 aa12.57□□□□□ -0.4
DEPDC4-202ENST00000378244 DHX40Q8IX18 779 aaKnown RBP12.57□□□□□ -0.4
DEPDC4-202ENST00000378244 ADGRF2Q8IZF7 708 aa12.57□□□□□ -0.4
DEPDC4-202ENST00000378244 MRPL45Q9BRJ2 306 aaKnown RBP12.57□□□□□ -0.4
DEPDC4-202ENST00000378244 VPS16Q9H269 839 aa12.57□□□□□ -0.4
DEPDC4-202ENST00000378244 SMYD3Q9H7B4 428 aa12.57□□□□□ -0.4
DEPDC4-202ENST00000378244 APOBEC3GQ9HC16 384 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms