RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 CPB2Q96IY4 423 aa13.89□□□□□ -0.19
NPHP4-203ENST00000378169 FSD1LQ9BXM9 530 aa13.89□□□□□ -0.19
NPHP4-203ENST00000378169 TRABDQ9H4I3 376 aa13.89□□□□□ -0.19
NPHP4-203ENST00000378169 CISHQ9NSE2 258 aa13.89□□□□□ -0.19
NPHP4-203ENST00000378169 LCMT1Q9UIC8 334 aa13.89□□□□□ -0.19
NPHP4-203ENST00000378169 POLIQ9UNA4 740 aa13.89□□□□□ -0.19
NPHP4-203ENST00000378169 LPXNO60711 386 aa13.88□□□□□ -0.19
NPHP4-203ENST00000378169 SASH3O75995 380 aa13.88□□□□□ -0.19
NPHP4-203ENST00000378169 MAGEA9P43362 315 aa13.88□□□□□ -0.19
NPHP4-203ENST00000378169 NR1H3Q13133 447 aa13.88□□□□□ -0.19
NPHP4-203ENST00000378169 STAT4Q14765 748 aa13.88□□□□□ -0.19
NPHP4-203ENST00000378169 DCAF6Q58WW2 860 aa13.88□□□□□ -0.19
NPHP4-203ENST00000378169 HSD17B14Q9BPX1 270 aa13.88□□□□□ -0.19
NPHP4-203ENST00000378169 TRIM66O15016 1216 aa13.88□□□□□ -0.19
NPHP4-203ENST00000378169 IL18RAPO95256 599 aa13.88□□□□□ -0.19
NPHP4-203ENST00000378169 CYP2C8P10632 490 aa13.88□□□□□ -0.19
NPHP4-203ENST00000378169 PMLP29590 882 aa13.88□□□□□ -0.19
NPHP4-203ENST00000378169 EPHB1P54762 984 aa13.88□□□□□ -0.19
NPHP4-203ENST00000378169 ACOT1Q86TX2 421 aa13.88□□□□□ -0.19
NPHP4-203ENST00000378169 VSIG10LQ86VR7 867 aa13.88□□□□□ -0.19
NPHP4-203ENST00000378169 HIPK4Q8NE63 616 aa13.88□□□□□ -0.19
NPHP4-203ENST00000378169 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.88□□□□□ -0.19
NPHP4-203ENST00000378169 TXLNGQ9NUQ3 528 aa13.88□□□□□ -0.19
NPHP4-203ENST00000378169 TYW5A2RUC4 315 aaKnown RBP13.88□□□□□ -0.19
NPHP4-203ENST00000378169 ZNF286BP0CG31 522 aa13.88□□□□□ -0.19
NPHP4-203ENST00000378169 INSRRP14616 1297 aa13.88□□□□□ -0.19
NPHP4-203ENST00000378169 ELF1P32519 619 aa13.88□□□□□ -0.19
NPHP4-203ENST00000378169 EPHX2P34913 555 aa13.88□□□□□ -0.19
NPHP4-203ENST00000378169 TSTA3Q13630 321 aaPredicted RBP13.88□□□□□ -0.19
NPHP4-203ENST00000378169 ARSHQ5FYA8 562 aa13.88□□□□□ -0.19
NPHP4-203ENST00000378169 CREG2Q8IUH2 290 aa13.88□□□□□ -0.19
NPHP4-203ENST00000378169 FAM71DQ8N9W8 422 aa13.88□□□□□ -0.19
NPHP4-203ENST00000378169 ARHGEF26Q96DR7 871 aa13.88□□□□□ -0.19
NPHP4-203ENST00000378169 MAGEA4P43358 317 aa13.88□□□□□ -0.19
NPHP4-203ENST00000378169 LAMTOR4Q0VGL1 99 aa13.88□□□□□ -0.19
NPHP4-203ENST00000378169 CRLF3Q8IUI8 442 aa13.88□□□□□ -0.19
NPHP4-203ENST00000378169 SPON2Q9BUD6 331 aa13.88□□□□□ -0.19
NPHP4-203ENST00000378169 ASTN1O14525 1302 aa13.87□□□□□ -0.19
NPHP4-203ENST00000378169 CYP3A7-CYP3A51PA0A087WV96 503 aa13.87□□□□□ -0.19
NPHP4-203ENST00000378169 H3BRB1 525 aa13.87□□□□□ -0.19
NPHP4-203ENST00000378169 CFLARO15519 480 aa13.87□□□□□ -0.19
NPHP4-203ENST00000378169 RPS6KA5O75582 802 aa13.87□□□□□ -0.19
NPHP4-203ENST00000378169 AGTP01019 485 aa13.87□□□□□ -0.19
NPHP4-203ENST00000378169 SNHG28P0DPA3 235 aa13.87□□□□□ -0.19
NPHP4-203ENST00000378169 CYP3A7P24462 503 aa13.87□□□□□ -0.19
NPHP4-203ENST00000378169 KYAT1Q16773 422 aa13.87□□□□□ -0.19
NPHP4-203ENST00000378169 MPZL3Q6UWV2 235 aa13.87□□□□□ -0.19
NPHP4-203ENST00000378169 TRMT10CQ7L0Y3 403 aaKnown RBP13.87□□□□□ -0.19
NPHP4-203ENST00000378169 CDKL3Q8IVW4 592 aaPredicted RBP13.87□□□□□ -0.19
NPHP4-203ENST00000378169 WDR75Q8IWA0 830 aaKnown RBP13.87□□□□□ -0.19
NPHP4-203ENST00000378169 SPIRE2Q8WWL2 714 aa13.87□□□□□ -0.19
NPHP4-203ENST00000378169 ATP6V1E2Q96A05 226 aa13.87□□□□□ -0.19
NPHP4-203ENST00000378169 PGBD4Q96DM1 585 aa13.87□□□□□ -0.19
NPHP4-203ENST00000378169 LRRC37BQ96QE4 947 aa13.87□□□□□ -0.19
NPHP4-203ENST00000378169 TUT1Q9H6E5 874 aaKnown RBP13.87□□□□□ -0.19
NPHP4-203ENST00000378169 TPX2Q9ULW0 747 aaKnown RBP13.87□□□□□ -0.19
NPHP4-203ENST00000378169 STAG3L1P0CL83 205 aa13.87□□□□□ -0.19
NPHP4-203ENST00000378169 HSPA9P38646 679 aaKnown RBP13.87□□□□□ -0.19
NPHP4-203ENST00000378169 SULT1E1P49888 294 aa13.87□□□□□ -0.19
NPHP4-203ENST00000378169 SLC12A1Q13621 1099 aa13.87□□□□□ -0.19
NPHP4-203ENST00000378169 MYBPC2Q14324 1141 aa13.87□□□□□ -0.19
NPHP4-203ENST00000378169 SH2D4BQ5SQS7 431 aa13.87□□□□□ -0.19
NPHP4-203ENST00000378169 ATG16L1Q676U5 607 aa13.87□□□□□ -0.19
NPHP4-203ENST00000378169 C3orf62Q6ZUJ4 267 aa13.87□□□□□ -0.19
NPHP4-203ENST00000378169 AGR3Q8TD06 166 aa13.87□□□□□ -0.19
NPHP4-203ENST00000378169 PPP1R13LQ8WUF5 828 aa13.87□□□□□ -0.19
NPHP4-203ENST00000378169 EPN3Q9H201 632 aa13.87□□□□□ -0.19
NPHP4-203ENST00000378169 TAS2R14Q9NYV8 317 aa13.87□□□□□ -0.19
NPHP4-203ENST00000378169 NALCNQ8IZF0 1738 aa13.87□□□□□ -0.19
NPHP4-203ENST00000378169 TMEM120BA0PK00 339 aa13.87□□□□□ -0.19
NPHP4-203ENST00000378169 YDJCA8MPS7 323 aa13.87□□□□□ -0.19
NPHP4-203ENST00000378169 H3BRJ5 948 aa13.87□□□□□ -0.19
NPHP4-203ENST00000378169 TYK2P29597 1187 aa13.87□□□□□ -0.19
NPHP4-203ENST00000378169 ERFP50548 548 aa13.87□□□□□ -0.19
NPHP4-203ENST00000378169 PPATQ06203 517 aa13.87□□□□□ -0.19
NPHP4-203ENST00000378169 GOLGA7BQ2TAP0 167 aa13.87□□□□□ -0.19
NPHP4-203ENST00000378169 SH3BP5LQ7L8J4 393 aa13.87□□□□□ -0.19
NPHP4-203ENST00000378169 ASCC2Q9H1I8 757 aaPredicted RBP13.87□□□□□ -0.19
NPHP4-203ENST00000378169 ETNK1Q9HBU6 452 aa13.87□□□□□ -0.19
NPHP4-203ENST00000378169 XPO7Q9UIA9 1087 aaKnown RBP13.87□□□□□ -0.19
NPHP4-203ENST00000378169 PFDN6O15212 129 aa13.86□□□□□ -0.19
NPHP4-203ENST00000378169 GJB6O95452 261 aa13.86□□□□□ -0.19
NPHP4-203ENST00000378169 HSPA4LO95757 839 aa13.86□□□□□ -0.19
NPHP4-203ENST00000378169 CPB1P15086 417 aa13.86□□□□□ -0.19
NPHP4-203ENST00000378169 ARHGEF6Q15052 776 aa13.86□□□□□ -0.19
NPHP4-203ENST00000378169 PAN2Q504Q3 1202 aaKnown RBP13.86□□□□□ -0.19
NPHP4-203ENST00000378169 BTBD8Q5XKL5 378 aa13.86□□□□□ -0.19
NPHP4-203ENST00000378169 ACTRT1Q8TDG2 376 aa13.86□□□□□ -0.19
NPHP4-203ENST00000378169 ZNF473Q8WTR7 871 aaKnown RBP13.86□□□□□ -0.19
NPHP4-203ENST00000378169 BAP1Q92560 729 aa13.86□□□□□ -0.19
NPHP4-203ENST00000378169 CYTH2Q99418 400 aa13.86□□□□□ -0.19
NPHP4-203ENST00000378169 CGRRF1Q99675 332 aa13.86□□□□□ -0.19
NPHP4-203ENST00000378169 RNF19AQ9NV58 838 aa13.86□□□□□ -0.19
NPHP4-203ENST00000378169 DPP3Q9NY33 737 aa13.86□□□□□ -0.19
NPHP4-203ENST00000378169 ALDH5A1P51649 535 aaPredicted RBP13.86□□□□□ -0.19
NPHP4-203ENST00000378169 CDH8P55286 799 aa13.86□□□□□ -0.19
NPHP4-203ENST00000378169 VGLL4Q14135 290 aa13.86□□□□□ -0.19
NPHP4-203ENST00000378169 LRRC31Q6UY01 552 aa13.86□□□□□ -0.19
NPHP4-203ENST00000378169 NOP9Q86U38 636 aaKnown RBP13.86□□□□□ -0.19
NPHP4-203ENST00000378169 GBP7Q8N8V2 638 aaPredicted RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms