RNA–Protein interactions for RNA: ENST00000378105.4

PCDHGA1-201, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA1, Length 4,069 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-201ENST00000378105 STAMBPO95630 424 aa11.41□□□□□ -0.58
PCDHGA1-201ENST00000378105 ARL1P40616 181 aaPredicted RBP11.41□□□□□ -0.58
PCDHGA1-201ENST00000378105 EIF2B2P49770 351 aaKnown RBP11.41□□□□□ -0.58
PCDHGA1-201ENST00000378105 TUBA1BP68363 451 aa11.41□□□□□ -0.58
PCDHGA1-201ENST00000378105 ANKDD1AQ495B1 522 aa11.41□□□□□ -0.58
PCDHGA1-201ENST00000378105 OR52E8Q6IFG1 317 aa11.41□□□□□ -0.58
PCDHGA1-201ENST00000378105 CRELD2Q6UXH1 353 aaPredicted RBP11.41□□□□□ -0.58
PCDHGA1-201ENST00000378105 TUBA1AQ71U36 451 aa11.41□□□□□ -0.58
PCDHGA1-201ENST00000378105 METTL16Q86W50 562 aaKnown RBP11.41□□□□□ -0.58
PCDHGA1-201ENST00000378105 SLC38A6Q8IZM9 456 aa11.41□□□□□ -0.58
PCDHGA1-201ENST00000378105 PSD4Q8NDX1 1056 aa11.41□□□□□ -0.58
PCDHGA1-201ENST00000378105 RAET1EQ8TD07 263 aa11.41□□□□□ -0.58
PCDHGA1-201ENST00000378105 U2AF1L4Q8WU68 220 aaKnown RBP11.41□□□□□ -0.58
PCDHGA1-201ENST00000378105 ASIC4Q96FT7 647 aa11.41□□□□□ -0.58
PCDHGA1-201ENST00000378105 AGXT2Q9BYV1 514 aa11.41□□□□□ -0.58
PCDHGA1-201ENST00000378105 NDST4Q9H3R1 872 aa11.41□□□□□ -0.58
PCDHGA1-201ENST00000378105 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.41□□□□□ -0.58
PCDHGA1-201ENST00000378105 CTTNBP2NLQ9P2B4 639 aa11.41□□□□□ -0.58
PCDHGA1-201ENST00000378105 PDLIM1O00151 329 aa11.41□□□□□ -0.58
PCDHGA1-201ENST00000378105 EGFRP00533 1210 aa11.41□□□□□ -0.58
PCDHGA1-201ENST00000378105 ICAM1P05362 532 aa11.41□□□□□ -0.58
PCDHGA1-201ENST00000378105 KRT16P08779 473 aa11.41□□□□□ -0.58
PCDHGA1-201ENST00000378105 CD97P48960 835 aa11.41□□□□□ -0.58
PCDHGA1-201ENST00000378105 POLD2P49005 469 aa11.41□□□□□ -0.58
PCDHGA1-201ENST00000378105 NAA20P61599 178 aa11.41□□□□□ -0.58
PCDHGA1-201ENST00000378105 COASYQ13057 564 aa11.41□□□□□ -0.58
PCDHGA1-201ENST00000378105 UNC13DQ70J99 1090 aa11.41□□□□□ -0.58
PCDHGA1-201ENST00000378105 CATSPER4Q7RTX7 472 aa11.41□□□□□ -0.58
PCDHGA1-201ENST00000378105 C1orf112Q9NSG2 853 aa11.41□□□□□ -0.58
PCDHGA1-201ENST00000378105 AGAP1Q9UPQ3 857 aa11.41□□□□□ -0.58
PCDHGA1-201ENST00000378105 COL6A3P12111 3177 aa11.41□□□□□ -0.58
PCDHGA1-201ENST00000378105 A0A1W2PRG0 241 aa11.41□□□□□ -0.58
PCDHGA1-201ENST00000378105 WDR91A4D1P6 747 aa11.41□□□□□ -0.58
PCDHGA1-201ENST00000378105 ARHGAP6O43182 974 aa11.41□□□□□ -0.58
PCDHGA1-201ENST00000378105 TCEA1P23193 301 aaKnown RBP11.41□□□□□ -0.58
PCDHGA1-201ENST00000378105 MDH1P40925 334 aaKnown RBP11.41□□□□□ -0.58
PCDHGA1-201ENST00000378105 STAT5BP51692 787 aa11.41□□□□□ -0.58
PCDHGA1-201ENST00000378105 SYT2Q8N9I0 419 aaPredicted RBP11.41□□□□□ -0.58
PCDHGA1-201ENST00000378105 CCHCR1Q8TD31 782 aa11.41□□□□□ -0.58
PCDHGA1-201ENST00000378105 MAP3K14Q99558 947 aa11.41□□□□□ -0.58
PCDHGA1-201ENST00000378105 TMEM206Q9H813 350 aa11.41□□□□□ -0.58
PCDHGA1-201ENST00000378105 VIPAS39Q9H9C1 493 aa11.41□□□□□ -0.58
PCDHGA1-201ENST00000378105 C12orf4Q9NQ89 552 aa11.41□□□□□ -0.58
PCDHGA1-201ENST00000378105 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.41□□□□□ -0.58
PCDHGA1-201ENST00000378105 DENND3A2RUS2 1198 aa11.4□□□□□ -0.58
PCDHGA1-201ENST00000378105 GMNCA6NCL1 334 aa11.4□□□□□ -0.58
PCDHGA1-201ENST00000378105 NMT1P30419 496 aaKnown RBP11.4□□□□□ -0.58
PCDHGA1-201ENST00000378105 TOB1P50616 345 aaPredicted RBP11.4□□□□□ -0.58
PCDHGA1-201ENST00000378105 PTPN5P54829 565 aa11.4□□□□□ -0.58
PCDHGA1-201ENST00000378105 PSMC5P62195 406 aa11.4□□□□□ -0.58
PCDHGA1-201ENST00000378105 LACTBP83111 547 aaPredicted RBP11.4□□□□□ -0.58
PCDHGA1-201ENST00000378105 DRP2Q13474 957 aa11.4□□□□□ -0.58
PCDHGA1-201ENST00000378105 TRIM14Q14142 442 aa11.4□□□□□ -0.58
PCDHGA1-201ENST00000378105 C21orf62-AS1Q17RA5 79 aa11.4□□□□□ -0.58
PCDHGA1-201ENST00000378105 P2RX7Q99572 595 aaKnown RBP11.4□□□□□ -0.58
PCDHGA1-201ENST00000378105 CALN1Q9BXU9 219 aa11.4□□□□□ -0.58
PCDHGA1-201ENST00000378105 GBA3Q9H227 469 aa11.4□□□□□ -0.58
PCDHGA1-201ENST00000378105 BTBD7Q9P203 1132 aa11.4□□□□□ -0.58
PCDHGA1-201ENST00000378105 PGAP2Q9UHJ9 254 aa11.4□□□□□ -0.58
PCDHGA1-201ENST00000378105 TACC3Q9Y6A5 838 aa11.4□□□□□ -0.58
PCDHGA1-201ENST00000378105 CARNS1A5YM72 827 aa11.4□□□□□ -0.58
PCDHGA1-201ENST00000378105 A8MU76 341 aa11.4□□□□□ -0.58
PCDHGA1-201ENST00000378105 H0YCG3 227 aa11.4□□□□□ -0.58
PCDHGA1-201ENST00000378105 TNNC2P02585 160 aa11.4□□□□□ -0.58
PCDHGA1-201ENST00000378105 PTPRAP18433 802 aa11.4□□□□□ -0.58
PCDHGA1-201ENST00000378105 PSMC2P35998 433 aaKnown RBP11.4□□□□□ -0.58
PCDHGA1-201ENST00000378105 C2orf54Q08AI8 447 aa11.4□□□□□ -0.58
PCDHGA1-201ENST00000378105 TTC39CQ8N584 583 aa11.4□□□□□ -0.58
PCDHGA1-201ENST00000378105 APPL2Q8NEU8 664 aa11.4□□□□□ -0.58
PCDHGA1-201ENST00000378105 TMEM143Q96AN5 459 aa11.4□□□□□ -0.58
PCDHGA1-201ENST00000378105 GMCL1Q96IK5 515 aa11.4□□□□□ -0.58
PCDHGA1-201ENST00000378105 C8orf48Q96LL4 319 aa11.4□□□□□ -0.58
PCDHGA1-201ENST00000378105 CCDC113Q9H0I3 377 aa11.4□□□□□ -0.58
PCDHGA1-201ENST00000378105 TFR2Q9UP52 801 aa11.4□□□□□ -0.58
PCDHGA1-201ENST00000378105 TLL2Q9Y6L7 1015 aa11.4□□□□□ -0.58
PCDHGA1-201ENST00000378105 ARP10275 920 aa11.4□□□□□ -0.58
PCDHGA1-201ENST00000378105 ZNF131P52739 623 aa11.4□□□□□ -0.58
PCDHGA1-201ENST00000378105 HPCAP84074 193 aa11.4□□□□□ -0.58
PCDHGA1-201ENST00000378105 CD300CQ08708 224 aa11.4□□□□□ -0.58
PCDHGA1-201ENST00000378105 PPIDQ08752 370 aaKnown RBP11.4□□□□□ -0.58
PCDHGA1-201ENST00000378105 VWA3BQ502W6 1294 aa11.4□□□□□ -0.58
PCDHGA1-201ENST00000378105 RNF10Q8N5U6 811 aaKnown RBP11.4□□□□□ -0.58
PCDHGA1-201ENST00000378105 IFT81Q8WYA0 676 aa11.4□□□□□ -0.58
PCDHGA1-201ENST00000378105 VPS33BQ9H267 617 aa11.4□□□□□ -0.58
PCDHGA1-201ENST00000378105 RIOX1Q9H6W3 641 aa11.4□□□□□ -0.58
PCDHGA1-201ENST00000378105 ADAM22Q9P0K1 906 aa11.4□□□□□ -0.58
PCDHGA1-201ENST00000378105 TELO2Q9Y4R8 837 aa11.4□□□□□ -0.58
PCDHGA1-201ENST00000378105 A0A0B4J203 849 aa11.4□□□□□ -0.59
PCDHGA1-201ENST00000378105 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.4□□□□□ -0.59
PCDHGA1-201ENST00000378105 DGKIO75912 1065 aa11.4□□□□□ -0.59
PCDHGA1-201ENST00000378105 NQO1P15559 274 aaKnown RBP11.4□□□□□ -0.59
PCDHGA1-201ENST00000378105 PRKACAP17612 351 aa11.4□□□□□ -0.59
PCDHGA1-201ENST00000378105 GBP1P32455 592 aa11.4□□□□□ -0.59
PCDHGA1-201ENST00000378105 NR1D2Q14995 579 aa11.4□□□□□ -0.59
PCDHGA1-201ENST00000378105 ZNF746Q6NUN9 644 aaPredicted RBP11.4□□□□□ -0.59
PCDHGA1-201ENST00000378105 FIP1L1Q6UN15 594 aaKnown RBP11.4□□□□□ -0.59
PCDHGA1-201ENST00000378105 HACE1Q8IYU2 909 aa11.4□□□□□ -0.59
PCDHGA1-201ENST00000378105 NSMCE3Q96MG7 304 aa11.4□□□□□ -0.59
PCDHGA1-201ENST00000378105 ZIM3Q96PE6 472 aa11.4□□□□□ -0.59
PCDHGA1-201ENST00000378105 IFIH1Q9BYX4 1025 aaKnown RBP11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms