RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 CFAP157Q5JU67 520 aa16.76■□□□□ 0.27
CKAP4-201ENST00000378026 BBOF1Q8ND07 529 aa16.76■□□□□ 0.27
CKAP4-201ENST00000378026 PTCD3Q96EY7 689 aaKnown RBP16.76■□□□□ 0.27
CKAP4-201ENST00000378026 NDNQ99608 321 aa16.76■□□□□ 0.27
CKAP4-201ENST00000378026 HSPBP1Q9NZL4 362 aa16.76■□□□□ 0.27
CKAP4-201ENST00000378026 DNPEPQ9ULA0 475 aa16.76■□□□□ 0.27
CKAP4-201ENST00000378026 ZBTB21Q9ULJ3 1066 aa16.76■□□□□ 0.27
CKAP4-201ENST00000378026 RIMBP2O15034 1052 aa16.76■□□□□ 0.27
CKAP4-201ENST00000378026 GAS7O60861 476 aa16.76■□□□□ 0.27
CKAP4-201ENST00000378026 GAD2Q05329 585 aa16.76■□□□□ 0.27
CKAP4-201ENST00000378026 TCP10Q12799 353 aa16.76■□□□□ 0.27
CKAP4-201ENST00000378026 RGS9BPQ6ZS82 235 aa16.76■□□□□ 0.27
CKAP4-201ENST00000378026 PASD1Q8IV76 773 aa16.76■□□□□ 0.27
CKAP4-201ENST00000378026 FBXO27Q8NI29 283 aa16.76■□□□□ 0.27
CKAP4-201ENST00000378026 MANSC1Q9H8J5 431 aa16.76■□□□□ 0.27
CKAP4-201ENST00000378026 STX18Q9P2W9 335 aaKnown RBP16.76■□□□□ 0.27
CKAP4-201ENST00000378026 H3BRJ5 948 aa16.75■□□□□ 0.27
CKAP4-201ENST00000378026 CACNB3P54284 484 aa16.75■□□□□ 0.27
CKAP4-201ENST00000378026 FAM182AQ5T1J6 154 aa16.75■□□□□ 0.27
CKAP4-201ENST00000378026 CBWD2Q8IUF1 395 aa16.75■□□□□ 0.27
CKAP4-201ENST00000378026 CFAP61Q8NHU2 1237 aa16.75■□□□□ 0.27
CKAP4-201ENST00000378026 TTC17Q96AE7 1141 aa16.75■□□□□ 0.27
CKAP4-201ENST00000378026 ACSF2Q96CM8 615 aaPredicted RBP16.75■□□□□ 0.27
CKAP4-201ENST00000378026 TIPINQ9BVW5 301 aa16.75■□□□□ 0.27
CKAP4-201ENST00000378026 C10orf88Q9H8K7 445 aa16.75■□□□□ 0.27
CKAP4-201ENST00000378026 STRCP1A6NGW2 1772 aa16.75■□□□□ 0.27
CKAP4-201ENST00000378026 ADRA2BP18089 450 aa16.75■□□□□ 0.27
CKAP4-201ENST00000378026 RTP1P59025 263 aa16.75■□□□□ 0.27
CKAP4-201ENST00000378026 TFDP1Q14186 410 aa16.75■□□□□ 0.27
CKAP4-201ENST00000378026 CCNG2Q16589 344 aa16.75■□□□□ 0.27
CKAP4-201ENST00000378026 DAW1Q8N136 415 aa16.75■□□□□ 0.27
CKAP4-201ENST00000378026 XXYLT1Q8NBI6 393 aa16.75■□□□□ 0.27
CKAP4-201ENST00000378026 TSSK1BQ9BXA7 367 aa16.75■□□□□ 0.27
CKAP4-201ENST00000378026 B2RBV5 119 aa16.74■□□□□ 0.27
CKAP4-201ENST00000378026 F5H6K3 240 aa16.74■□□□□ 0.27
CKAP4-201ENST00000378026 ENO1P06733 434 aaKnown RBP16.74■□□□□ 0.27
CKAP4-201ENST00000378026 ADRB2P07550 413 aa16.74■□□□□ 0.27
CKAP4-201ENST00000378026 KLRC2P26717 231 aa16.74■□□□□ 0.27
CKAP4-201ENST00000378026 PSMC4P43686 418 aa16.74■□□□□ 0.27
CKAP4-201ENST00000378026 GRAPQ13588 217 aa16.74■□□□□ 0.27
CKAP4-201ENST00000378026 SLF2Q8IX21 1173 aa16.74■□□□□ 0.27
CKAP4-201ENST00000378026 FAM81AQ8TBF8 368 aa16.74■□□□□ 0.27
CKAP4-201ENST00000378026 GRAPLQ8TC17 118 aaPredicted RBP16.74■□□□□ 0.27
CKAP4-201ENST00000378026 SHC3Q92529 594 aa16.74■□□□□ 0.27
CKAP4-201ENST00000378026 PSMC3IPQ9P2W1 217 aaPredicted RBP16.74■□□□□ 0.27
CKAP4-201ENST00000378026 C10orf71Q711Q0 1435 aa16.74■□□□□ 0.27
CKAP4-201ENST00000378026 CYP3A4P08684 503 aa16.74■□□□□ 0.27
CKAP4-201ENST00000378026 ABHD2P08910 425 aa16.74■□□□□ 0.27
CKAP4-201ENST00000378026 CENPCQ03188 943 aa16.74■□□□□ 0.27
CKAP4-201ENST00000378026 ALYREFQ86V81 257 aaKnown RBP16.74■□□□□ 0.27
CKAP4-201ENST00000378026 ZFPM1Q8IX07 1006 aa16.74■□□□□ 0.27
CKAP4-201ENST00000378026 BICD1Q96G01 975 aa16.74■□□□□ 0.27
CKAP4-201ENST00000378026 LMCD1Q9NZU5 365 aa16.74■□□□□ 0.27
CKAP4-201ENST00000378026 PDP2Q9P2J9 529 aa16.74■□□□□ 0.27
CKAP4-201ENST00000378026 SEL1LQ9UBV2 794 aa16.74■□□□□ 0.27
CKAP4-201ENST00000378026 RPL26L1Q9UNX3 145 aaKnown RBP16.74■□□□□ 0.27
CKAP4-201ENST00000378026 PLIN4Q96Q06 1357 aa16.74■□□□□ 0.27
CKAP4-201ENST00000378026 GNPATO15228 680 aa16.73■□□□□ 0.27
CKAP4-201ENST00000378026 KDSRQ06136 332 aa16.73■□□□□ 0.27
CKAP4-201ENST00000378026 KLF1Q13351 362 aaPredicted RBP16.73■□□□□ 0.27
CKAP4-201ENST00000378026 DYNC1I2Q13409 638 aaKnown RBP16.73■□□□□ 0.27
CKAP4-201ENST00000378026 TAS1R2Q8TE23 839 aa16.73■□□□□ 0.27
CKAP4-201ENST00000378026 NACC1Q96RE7 527 aa16.73■□□□□ 0.27
CKAP4-201ENST00000378026 C11orf70Q9BRQ4 267 aa16.73■□□□□ 0.27
CKAP4-201ENST00000378026 LXNQ9BS40 222 aa16.73■□□□□ 0.27
CKAP4-201ENST00000378026 FAM237BA0A1B0GVD1 139 aa16.73■□□□□ 0.27
CKAP4-201ENST00000378026 DNALI1O14645 258 aaPredicted RBP16.73■□□□□ 0.27
CKAP4-201ENST00000378026 MYL2P10916 166 aa16.73■□□□□ 0.27
CKAP4-201ENST00000378026 PYGBP11216 843 aa16.73■□□□□ 0.27
CKAP4-201ENST00000378026 GYS1P13807 737 aa16.73■□□□□ 0.27
CKAP4-201ENST00000378026 ADSSP30520 456 aa16.73■□□□□ 0.27
CKAP4-201ENST00000378026 CLEC16AQ2KHT3 1053 aa16.73■□□□□ 0.27
CKAP4-201ENST00000378026 TUFT1Q9NNX1 390 aa16.73■□□□□ 0.27
CKAP4-201ENST00000378026 ZBTB12Q9Y330 459 aaPredicted RBP16.73■□□□□ 0.27
CKAP4-201ENST00000378026 hCG_2014768A0A024R1R8 64 aa16.73■□□□□ 0.27
CKAP4-201ENST00000378026 GRIN3BO60391 1043 aa16.73■□□□□ 0.27
CKAP4-201ENST00000378026 SPATA31D3P0C874 917 aa16.73■□□□□ 0.27
CKAP4-201ENST00000378026 BGNP21810 368 aa16.73■□□□□ 0.27
CKAP4-201ENST00000378026 NFIAQ12857 509 aa16.73■□□□□ 0.27
CKAP4-201ENST00000378026 ISLR2Q6UXK2 745 aa16.73■□□□□ 0.27
CKAP4-201ENST00000378026 SPATA31D4Q6ZUB0 917 aa16.73■□□□□ 0.27
CKAP4-201ENST00000378026 MCOLN2Q8IZK6 566 aa16.73■□□□□ 0.27
CKAP4-201ENST00000378026 ITFG2Q969R8 447 aa16.73■□□□□ 0.27
CKAP4-201ENST00000378026 FNBP1Q96RU3 617 aa16.73■□□□□ 0.27
CKAP4-201ENST00000378026 NMUR2Q9GZQ4 415 aa16.73■□□□□ 0.27
CKAP4-201ENST00000378026 DMAP1Q9NPF5 467 aaPredicted RBP16.73■□□□□ 0.27
CKAP4-201ENST00000378026 SENP1Q9P0U3 644 aa16.73■□□□□ 0.27
CKAP4-201ENST00000378026 NHSQ6T4R5 1651 aa16.72■□□□□ 0.27
CKAP4-201ENST00000378026 TMEM150BA6NC51 233 aa16.72■□□□□ 0.27
CKAP4-201ENST00000378026 OPHN1O60890 802 aa16.72■□□□□ 0.27
CKAP4-201ENST00000378026 TCF4P15884 667 aa16.72■□□□□ 0.27
CKAP4-201ENST00000378026 ARL4CP56559 192 aa16.72■□□□□ 0.27
CKAP4-201ENST00000378026 MTMR2Q13614 643 aa16.72■□□□□ 0.27
CKAP4-201ENST00000378026 PADI6Q6TGC4 694 aa16.72■□□□□ 0.27
CKAP4-201ENST00000378026 DDX1Q92499 740 aaKnown RBP16.72■□□□□ 0.27
CKAP4-201ENST00000378026 TTC25Q96NG3 672 aa16.72■□□□□ 0.27
CKAP4-201ENST00000378026 THTPAQ9BU02 230 aa16.72■□□□□ 0.27
CKAP4-201ENST00000378026 ASCC2Q9H1I8 757 aaPredicted RBP16.72■□□□□ 0.27
CKAP4-201ENST00000378026 ZNF212Q9UDV6 495 aa16.72■□□□□ 0.27
CKAP4-201ENST00000378026 STK24Q9Y6E0 443 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms