RNA–Protein interactions for RNA: ENST00000377819.9

RTN3-206, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,937 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-206ENST00000377819 WWP2O00308 870 aa11.1□□□□□ -0.63
RTN3-206ENST00000377819 USP1O94782 785 aa11.1□□□□□ -0.63
RTN3-206ENST00000377819 SEC31AO94979 1220 aaKnown RBP11.1□□□□□ -0.63
RTN3-206ENST00000377819 PPP2R1BP30154 601 aa11.1□□□□□ -0.63
RTN3-206ENST00000377819 SPRP35270 261 aaPredicted RBP11.1□□□□□ -0.63
RTN3-206ENST00000377819 SLC16A2P36021 539 aa11.1□□□□□ -0.63
RTN3-206ENST00000377819 AP3M2P53677 418 aa11.1□□□□□ -0.63
RTN3-206ENST00000377819 ARHGAP15Q53QZ3 475 aa11.1□□□□□ -0.63
RTN3-206ENST00000377819 TTC33Q6PID6 262 aaPredicted RBP11.1□□□□□ -0.63
RTN3-206ENST00000377819 KDELC2Q7Z4H8 507 aa11.1□□□□□ -0.63
RTN3-206ENST00000377819 GLYCTKQ8IVS8 523 aa11.1□□□□□ -0.63
RTN3-206ENST00000377819 NSUN6Q8TEA1 469 aaKnown RBP11.1□□□□□ -0.63
RTN3-206ENST00000377819 RMDN3Q96TC7 470 aa11.1□□□□□ -0.63
RTN3-206ENST00000377819 APOL5Q9BWW9 433 aa11.1□□□□□ -0.63
RTN3-206ENST00000377819 PARD6BQ9BYG5 372 aa11.1□□□□□ -0.63
RTN3-206ENST00000377819 ABCC4O15439 1325 aa11.1□□□□□ -0.63
RTN3-206ENST00000377819 ADGRF5Q8IZF2 1346 aa11.1□□□□□ -0.63
RTN3-206ENST00000377819 ADGRB3O60242 1522 aa11.1□□□□□ -0.63
RTN3-206ENST00000377819 SNX4O95219 450 aa11.1□□□□□ -0.63
RTN3-206ENST00000377819 STAT5AP42229 794 aa11.1□□□□□ -0.63
RTN3-206ENST00000377819 STAT5BP51692 787 aa11.1□□□□□ -0.63
RTN3-206ENST00000377819 NDUFA8P51970 172 aa11.1□□□□□ -0.63
RTN3-206ENST00000377819 PTK6Q13882 451 aa11.1□□□□□ -0.63
RTN3-206ENST00000377819 STAT4Q14765 748 aa11.1□□□□□ -0.63
RTN3-206ENST00000377819 RFX8Q6ZV50 586 aa11.1□□□□□ -0.63
RTN3-206ENST00000377819 EPHX4Q8IUS5 362 aa11.1□□□□□ -0.63
RTN3-206ENST00000377819 PHACTR4Q8IZ21 702 aa11.1□□□□□ -0.63
RTN3-206ENST00000377819 CLYBLQ8N0X4 340 aa11.1□□□□□ -0.63
RTN3-206ENST00000377819 KCTD17Q8N5Z5 321 aa11.1□□□□□ -0.63
RTN3-206ENST00000377819 SLC9A7Q96T83 725 aa11.1□□□□□ -0.63
RTN3-206ENST00000377819 KANSL1LA0AUZ9 987 aa11.09□□□□□ -0.63
RTN3-206ENST00000377819 STX7O15400 261 aaKnown RBP11.09□□□□□ -0.63
RTN3-206ENST00000377819 FOXP2O15409 715 aa11.09□□□□□ -0.63
RTN3-206ENST00000377819 OR6A2O95222 327 aa11.09□□□□□ -0.63
RTN3-206ENST00000377819 FGAP02671 866 aa11.09□□□□□ -0.63
RTN3-206ENST00000377819 PAICSP22234 425 aaKnown RBP11.09□□□□□ -0.63
RTN3-206ENST00000377819 ITGA1P56199 1179 aa11.09□□□□□ -0.63
RTN3-206ENST00000377819 SKP1P63208 163 aa11.09□□□□□ -0.63
RTN3-206ENST00000377819 COX10Q12887 443 aa11.09□□□□□ -0.63
RTN3-206ENST00000377819 STILQ15468 1287 aa11.09□□□□□ -0.63
RTN3-206ENST00000377819 NFIL3Q16649 462 aa11.09□□□□□ -0.63
RTN3-206ENST00000377819 OSCP1Q8WVF1 389 aa11.09□□□□□ -0.63
RTN3-206ENST00000377819 PCDHGA3Q9Y5H0 932 aa11.09□□□□□ -0.63
RTN3-206ENST00000377819 F5H423 210 aaPredicted RBP11.09□□□□□ -0.63
RTN3-206ENST00000377819 DNALI1O14645 258 aaPredicted RBP11.09□□□□□ -0.63
RTN3-206ENST00000377819 HSPA9P38646 679 aaKnown RBP11.09□□□□□ -0.63
RTN3-206ENST00000377819 PPP2R2AP63151 447 aa11.09□□□□□ -0.63
RTN3-206ENST00000377819 RPL19P84098 196 aaKnown RBP11.09□□□□□ -0.63
RTN3-206ENST00000377819 CDC42EP1Q00587 391 aa11.09□□□□□ -0.63
RTN3-206ENST00000377819 CHRNB3Q05901 458 aa11.09□□□□□ -0.63
RTN3-206ENST00000377819 DUOXA2Q1HG44 320 aa11.09□□□□□ -0.63
RTN3-206ENST00000377819 CACHD1Q5VU97 1274 aa11.09□□□□□ -0.63
RTN3-206ENST00000377819 LRRC8DQ7L1W4 858 aa11.09□□□□□ -0.63
RTN3-206ENST00000377819 SUCLG2Q96I99 432 aa11.09□□□□□ -0.63
RTN3-206ENST00000377819 AGAP3Q96P47 875 aa11.09□□□□□ -0.63
RTN3-206ENST00000377819 CLCC1Q96S66 551 aa11.09□□□□□ -0.63
RTN3-206ENST00000377819 ZCWPW1Q9H0M4 648 aa11.09□□□□□ -0.63
RTN3-206ENST00000377819 RWDD2AQ9UIY3 292 aa11.09□□□□□ -0.63
RTN3-206ENST00000377819 EIF3LQ9Y262 564 aaKnown RBP11.09□□□□□ -0.63
RTN3-206ENST00000377819 NDUFB9Q9Y6M9 179 aa11.09□□□□□ -0.63
RTN3-206ENST00000377819 TRAPPC8Q9Y2L5 1435 aa11.09□□□□□ -0.63
RTN3-206ENST00000377819 CYP2D7A0A087X1C5 515 aa11.09□□□□□ -0.63
RTN3-206ENST00000377819 VWA5AO00534 786 aa11.09□□□□□ -0.63
RTN3-206ENST00000377819 APOL1O14791 398 aa11.09□□□□□ -0.63
RTN3-206ENST00000377819 ENO2P09104 434 aaPredicted RBP11.09□□□□□ -0.63
RTN3-206ENST00000377819 BRINP3Q76B58 766 aa11.09□□□□□ -0.63
RTN3-206ENST00000377819 GPD1LQ8N335 351 aa11.09□□□□□ -0.63
RTN3-206ENST00000377819 ATPAF2Q8N5M1 289 aa11.09□□□□□ -0.63
RTN3-206ENST00000377819 SLITRK1Q96PX8 696 aa11.09□□□□□ -0.63
RTN3-206ENST00000377819 MRPL4Q9BYD3 311 aaKnown RBP11.09□□□□□ -0.63
RTN3-206ENST00000377819 HDHD2Q9H0R4 259 aa11.09□□□□□ -0.63
RTN3-206ENST00000377819 BATF3Q9NR55 127 aa11.09□□□□□ -0.63
RTN3-206ENST00000377819 KLHL3Q9UH77 587 aa11.09□□□□□ -0.63
RTN3-206ENST00000377819 IPPQ9Y573 584 aa11.09□□□□□ -0.63
RTN3-206ENST00000377819 FAM187AA6NFU0 413 aa11.09□□□□□ -0.63
RTN3-206ENST00000377819 ZNF839A8K0R7 811 aa11.09□□□□□ -0.63
RTN3-206ENST00000377819 P4HA2O15460 535 aa11.09□□□□□ -0.63
RTN3-206ENST00000377819 PLA2G4AP47712 749 aa11.09□□□□□ -0.63
RTN3-206ENST00000377819 ALDH1A3P47895 512 aa11.09□□□□□ -0.63
RTN3-206ENST00000377819 CCT3P49368 545 aaKnown RBP11.09□□□□□ -0.63
RTN3-206ENST00000377819 CCNIQ14094 377 aa11.09□□□□□ -0.63
RTN3-206ENST00000377819 ME3Q16798 604 aa11.09□□□□□ -0.63
RTN3-206ENST00000377819 LRRC36Q1X8D7 754 aa11.09□□□□□ -0.63
RTN3-206ENST00000377819 KRT24Q2M2I5 525 aa11.09□□□□□ -0.63
RTN3-206ENST00000377819 NDUFAF6Q330K2 333 aa11.09□□□□□ -0.63
RTN3-206ENST00000377819 C2CD6Q53TS8 623 aa11.09□□□□□ -0.63
RTN3-206ENST00000377819 TRIQKQ629K1 86 aa11.09□□□□□ -0.63
RTN3-206ENST00000377819 LIN54Q6MZP7 749 aa11.09□□□□□ -0.63
RTN3-206ENST00000377819 UGT3A1Q6NUS8 523 aa11.09□□□□□ -0.63
RTN3-206ENST00000377819 ULK3Q6PHR2 472 aa11.09□□□□□ -0.63
RTN3-206ENST00000377819 WNK4Q96J92 1243 aa11.09□□□□□ -0.63
RTN3-206ENST00000377819 TRIT1Q9H3H1 467 aaKnown RBP11.09□□□□□ -0.63
RTN3-206ENST00000377819 TASP1Q9H6P5 420 aa11.09□□□□□ -0.63
RTN3-206ENST00000377819 AATKQ6ZMQ8 1374 aa11.08□□□□□ -0.64
RTN3-206ENST00000377819 PRR23AA6NEV1 266 aa11.08□□□□□ -0.64
RTN3-206ENST00000377819 PDZK1P1A8MUH7 402 aa11.08□□□□□ -0.64
RTN3-206ENST00000377819 RGS20O76081 388 aa11.08□□□□□ -0.64
RTN3-206ENST00000377819 PTPN7P35236 360 aa11.08□□□□□ -0.64
RTN3-206ENST00000377819 GCLMP48507 274 aa11.08□□□□□ -0.64
RTN3-206ENST00000377819 NT5C2P49902 561 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms