RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 HNRNPDLO14979 420 aaKnown RBP20.82■□□□□ 0.92
CBWD3-204ENST00000377349 ADRB2P07550 413 aa20.82■□□□□ 0.92
CBWD3-204ENST00000377349 CPB1P15086 417 aa20.82■□□□□ 0.92
CBWD3-204ENST00000377349 YWHAHQ04917 246 aaPredicted RBP20.82■□□□□ 0.92
CBWD3-204ENST00000377349 RESTQ13127 1097 aa20.82■□□□□ 0.92
CBWD3-204ENST00000377349 HAUS6Q7Z4H7 955 aa20.82■□□□□ 0.92
CBWD3-204ENST00000377349 TMC8Q8IU68 726 aa20.82■□□□□ 0.92
CBWD3-204ENST00000377349 LARP4BQ92615 738 aaKnown RBP20.82■□□□□ 0.92
CBWD3-204ENST00000377349 RSPRY1Q96DX4 576 aa20.82■□□□□ 0.92
CBWD3-204ENST00000377349 KIF12Q96FN5 646 aa20.82■□□□□ 0.92
CBWD3-204ENST00000377349 BORCS6Q96GS4 357 aa20.82■□□□□ 0.92
CBWD3-204ENST00000377349 ZNF512Q96ME7 567 aaPredicted RBP20.82■□□□□ 0.92
CBWD3-204ENST00000377349 EPC1Q9H2F5 836 aa20.82■□□□□ 0.92
CBWD3-204ENST00000377349 PARVGQ9HBI0 331 aa20.82■□□□□ 0.92
CBWD3-204ENST00000377349 BLOC1S4Q9NUP1 217 aa20.82■□□□□ 0.92
CBWD3-204ENST00000377349 DLL3Q9NYJ7 618 aa20.82■□□□□ 0.92
CBWD3-204ENST00000377349 ODF2LQ9ULJ1 636 aa20.82■□□□□ 0.92
CBWD3-204ENST00000377349 MRPS17Q9Y2R5 130 aaKnown RBP20.82■□□□□ 0.92
CBWD3-204ENST00000377349 LACTBL1A8MY62 500 aa20.81■□□□□ 0.92
CBWD3-204ENST00000377349 NCAM2O15394 837 aa20.81■□□□□ 0.92
CBWD3-204ENST00000377349 MYL4P12829 197 aa20.81■□□□□ 0.92
CBWD3-204ENST00000377349 PSMC3P17980 439 aa20.81■□□□□ 0.92
CBWD3-204ENST00000377349 CYP3A5P20815 502 aa20.81■□□□□ 0.92
CBWD3-204ENST00000377349 TXLNAP40222 546 aa20.81■□□□□ 0.92
CBWD3-204ENST00000377349 TEAD2Q15562 447 aa20.81■□□□□ 0.92
CBWD3-204ENST00000377349 ENOX2Q16206 610 aaKnown RBP20.81■□□□□ 0.92
CBWD3-204ENST00000377349 IQCEQ6IPM2 695 aa20.81■□□□□ 0.92
CBWD3-204ENST00000377349 LEMD2Q8NC56 503 aa20.81■□□□□ 0.92
CBWD3-204ENST00000377349 ZSCAN18Q8TBC5 510 aaPredicted RBP20.81■□□□□ 0.92
CBWD3-204ENST00000377349 CLIC6Q96NY7 704 aa20.81■□□□□ 0.92
CBWD3-204ENST00000377349 CHRDQ9H2X0 955 aa20.81■□□□□ 0.92
CBWD3-204ENST00000377349 ASAH2Q9NR71 780 aa20.81■□□□□ 0.92
CBWD3-204ENST00000377349 UBQLN1Q9UMX0 589 aaKnown RBP20.81■□□□□ 0.92
CBWD3-204ENST00000377349 CACNA1BQ00975 2339 aa20.8■□□□□ 0.92
CBWD3-204ENST00000377349 SLC26A4O43511 780 aa20.8■□□□□ 0.92
CBWD3-204ENST00000377349 PIGRP01833 764 aa20.8■□□□□ 0.92
CBWD3-204ENST00000377349 GDI1P31150 447 aa20.8■□□□□ 0.92
CBWD3-204ENST00000377349 FOXD4L5Q5VV16 416 aaPredicted RBP20.8■□□□□ 0.92
CBWD3-204ENST00000377349 SLC39A4Q6P5W5 647 aa20.8■□□□□ 0.92
CBWD3-204ENST00000377349 USP49Q70CQ1 688 aa20.8■□□□□ 0.92
CBWD3-204ENST00000377349 ELMOD1Q8N336 334 aa20.8■□□□□ 0.92
CBWD3-204ENST00000377349 DEPDC1BQ8WUY9 529 aa20.8■□□□□ 0.92
CBWD3-204ENST00000377349 FOXD4L4Q8WXT5 416 aaPredicted RBP20.8■□□□□ 0.92
CBWD3-204ENST00000377349 IRF7Q92985 503 aa20.8■□□□□ 0.92
CBWD3-204ENST00000377349 FAM212AQ96EL1 285 aa20.8■□□□□ 0.92
CBWD3-204ENST00000377349 PGLYRP2Q96PD5 576 aa20.8■□□□□ 0.92
CBWD3-204ENST00000377349 CCDC39Q9UFE4 941 aa20.8■□□□□ 0.92
CBWD3-204ENST00000377349 NDRG2Q9UN36 371 aaKnown RBP20.8■□□□□ 0.92
CBWD3-204ENST00000377349 CNOT1A5YKK6 2376 aaKnown RBP20.8■□□□□ 0.92
CBWD3-204ENST00000377349 EPG5Q9HCE0 2579 aa20.8■□□□□ 0.92
CBWD3-204ENST00000377349 MAN2B1O00754 1011 aa20.79■□□□□ 0.92
CBWD3-204ENST00000377349 HSP90AA1P07900 732 aaKnown RBP20.79■□□□□ 0.92
CBWD3-204ENST00000377349 ZNF131P52739 623 aa20.79■□□□□ 0.92
CBWD3-204ENST00000377349 MAMSTRQ6ZN01 415 aa20.79■□□□□ 0.92
CBWD3-204ENST00000377349 DYMQ7RTS9 669 aa20.79■□□□□ 0.92
CBWD3-204ENST00000377349 DGLUCYQ7Z3D6 616 aa20.79■□□□□ 0.92
CBWD3-204ENST00000377349 MFSD6LQ8IWD5 586 aa20.79■□□□□ 0.92
CBWD3-204ENST00000377349 ATRIPQ8WXE1 791 aa20.79■□□□□ 0.92
CBWD3-204ENST00000377349 FIZ1Q96SL8 496 aa20.79■□□□□ 0.92
CBWD3-204ENST00000377349 MKNK1Q9BUB5 465 aa20.79■□□□□ 0.92
CBWD3-204ENST00000377349 TBX20Q9UMR3 447 aa20.79■□□□□ 0.92
CBWD3-204ENST00000377349 SMG5Q9UPR3 1016 aaKnown RBP20.79■□□□□ 0.92
CBWD3-204ENST00000377349 ACACBO00763 2458 aa20.79■□□□□ 0.92
CBWD3-204ENST00000377349 TRAK2O60296 914 aa20.78■□□□□ 0.92
CBWD3-204ENST00000377349 NMT1P30419 496 aaKnown RBP20.78■□□□□ 0.92
CBWD3-204ENST00000377349 PPP2R3AQ06190 1150 aa20.78■□□□□ 0.92
CBWD3-204ENST00000377349 DUSP4Q13115 394 aa20.78■□□□□ 0.92
CBWD3-204ENST00000377349 GPR17Q13304 367 aa20.78■□□□□ 0.92
CBWD3-204ENST00000377349 PUM1Q14671 1186 aaKnown RBP eCLIP20.78■□□□□ 0.92
CBWD3-204ENST00000377349 PTPAQ15257 358 aa20.78■□□□□ 0.92
CBWD3-204ENST00000377349 STXBP5Q5T5C0 1151 aa20.78■□□□□ 0.92
CBWD3-204ENST00000377349 CENPPQ6IPU0 288 aa20.78■□□□□ 0.92
CBWD3-204ENST00000377349 TTC9BQ8N6N2 239 aa20.78■□□□□ 0.92
CBWD3-204ENST00000377349 KRI1Q8N9T8 703 aaKnown RBP20.78■□□□□ 0.92
CBWD3-204ENST00000377349 INTS4Q96HW7 963 aaKnown RBP20.78■□□□□ 0.92
CBWD3-204ENST00000377349 TMEM209Q96SK2 561 aa20.78■□□□□ 0.92
CBWD3-204ENST00000377349 OXCT2Q9BYC2 517 aaPredicted RBP20.78■□□□□ 0.92
CBWD3-204ENST00000377349 FBXO2Q9UK22 296 aaPredicted RBP20.78■□□□□ 0.92
CBWD3-204ENST00000377349 MTMR6Q9Y217 621 aa20.78■□□□□ 0.92
CBWD3-204ENST00000377349 PIAS3Q9Y6X2 628 aa20.78■□□□□ 0.92
CBWD3-204ENST00000377349 A0A0B4J269 797 aa20.78■□□□□ 0.92
CBWD3-204ENST00000377349 A0A1W2PRU2 124 aa20.78■□□□□ 0.92
CBWD3-204ENST00000377349 MTMR11A4FU01 709 aa20.78■□□□□ 0.92
CBWD3-204ENST00000377349 OR6C75A6NL08 312 aa20.78■□□□□ 0.92
CBWD3-204ENST00000377349 HEPACAM2A8MVW5 462 aa20.78■□□□□ 0.92
CBWD3-204ENST00000377349 OGTO15294 1046 aa20.78■□□□□ 0.92
CBWD3-204ENST00000377349 STX6O43752 255 aa20.78■□□□□ 0.92
CBWD3-204ENST00000377349 TYMPP19971 482 aa20.78■□□□□ 0.92
CBWD3-204ENST00000377349 TGM1P22735 817 aa20.78■□□□□ 0.92
CBWD3-204ENST00000377349 GAS6Q14393 721 aa20.78■□□□□ 0.92
CBWD3-204ENST00000377349 WDR44Q5JSH3 913 aa20.78■□□□□ 0.92
CBWD3-204ENST00000377349 SPATA1Q5VX52 437 aa20.78■□□□□ 0.92
CBWD3-204ENST00000377349 RRAGBQ5VZM2 374 aa20.78■□□□□ 0.92
CBWD3-204ENST00000377349 FAM3CQ92520 227 aa20.78■□□□□ 0.92
CBWD3-204ENST00000377349 MSTO1Q9BUK6 570 aa20.78■□□□□ 0.92
CBWD3-204ENST00000377349 PANK2Q9BZ23 570 aa20.78■□□□□ 0.92
CBWD3-204ENST00000377349 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.78■□□□□ 0.92
CBWD3-204ENST00000377349 EML5Q05BV3 1969 aa20.77■□□□□ 0.92
CBWD3-204ENST00000377349 CHRNB1P11230 501 aa20.77■□□□□ 0.91
CBWD3-204ENST00000377349 LILRA4P59901 499 aa20.77■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms