RNA–Protein interactions for RNA: ENST00000377017.5

TIMP1-202, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 2 BASIC

Gene TIMP1, Length 626 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-202ENST00000377017 I3L4J1 428 aa14.11□□□□□ -0.15
TIMP1-202ENST00000377017 TEX33O43247 280 aa14.11□□□□□ -0.15
TIMP1-202ENST00000377017 URODP06132 367 aa14.11□□□□□ -0.15
TIMP1-202ENST00000377017 TRIM21P19474 475 aaKnown RBP14.11□□□□□ -0.15
TIMP1-202ENST00000377017 SLC9A1P19634 815 aa14.11□□□□□ -0.15
TIMP1-202ENST00000377017 GLUD2P49448 558 aa14.11□□□□□ -0.15
TIMP1-202ENST00000377017 GCNT1Q02742 428 aa14.11□□□□□ -0.15
TIMP1-202ENST00000377017 GPM6BQ13491 265 aa14.11□□□□□ -0.15
TIMP1-202ENST00000377017 CUL2Q13617 745 aa14.11□□□□□ -0.15
TIMP1-202ENST00000377017 SPOPLQ6IQ16 392 aa14.11□□□□□ -0.15
TIMP1-202ENST00000377017 SCARA5Q6ZMJ2 495 aa14.11□□□□□ -0.15
TIMP1-202ENST00000377017 ENOSF1Q7L5Y1 443 aa14.11□□□□□ -0.15
TIMP1-202ENST00000377017 CEP57Q86XR8 500 aa14.11□□□□□ -0.15
TIMP1-202ENST00000377017 RNF168Q8IYW5 571 aaPredicted RBP14.11□□□□□ -0.15
TIMP1-202ENST00000377017 ADGRF2Q8IZF7 708 aa14.11□□□□□ -0.15
TIMP1-202ENST00000377017 NEK11Q8NG66 645 aa14.11□□□□□ -0.15
TIMP1-202ENST00000377017 TTPALQ9BTX7 342 aa14.11□□□□□ -0.15
TIMP1-202ENST00000377017 OXCT2Q9BYC2 517 aaPredicted RBP14.11□□□□□ -0.15
TIMP1-202ENST00000377017 XPO4Q9C0E2 1151 aaKnown RBP14.11□□□□□ -0.15
TIMP1-202ENST00000377017 LMAN2LQ9H0V9 348 aa14.11□□□□□ -0.15
TIMP1-202ENST00000377017 ZNF576Q9H609 170 aa14.11□□□□□ -0.15
TIMP1-202ENST00000377017 APOBEC3GQ9HC16 384 aaKnown RBP14.11□□□□□ -0.15
TIMP1-202ENST00000377017 PLCB1Q9NQ66 1216 aa14.11□□□□□ -0.15
TIMP1-202ENST00000377017 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.11□□□□□ -0.154e-6■□□□□ 9.6
TIMP1-202ENST00000377017 LPXNO60711 386 aa14.1□□□□□ -0.15
TIMP1-202ENST00000377017 TACC1O75410 805 aa14.1□□□□□ -0.15
TIMP1-202ENST00000377017 CYP11A1P05108 521 aa14.1□□□□□ -0.15
TIMP1-202ENST00000377017 FGFR3P22607 806 aa14.1□□□□□ -0.15
TIMP1-202ENST00000377017 TKTP29401 623 aaKnown RBP14.1□□□□□ -0.15
TIMP1-202ENST00000377017 ASPAP45381 313 aa14.1□□□□□ -0.15
TIMP1-202ENST00000377017 LHX1P48742 406 aa14.1□□□□□ -0.15
TIMP1-202ENST00000377017 MFAP3P55082 362 aa14.1□□□□□ -0.15
TIMP1-202ENST00000377017 CREMQ03060 361 aa14.1□□□□□ -0.15
TIMP1-202ENST00000377017 YWHAHQ04917 246 aaPredicted RBP14.1□□□□□ -0.15
TIMP1-202ENST00000377017 KCNMA1Q12791 1236 aa14.1□□□□□ -0.15
TIMP1-202ENST00000377017 SCARA3Q6AZY7 606 aa14.1□□□□□ -0.15
TIMP1-202ENST00000377017 SMYD5Q6GMV2 418 aa14.1□□□□□ -0.15
TIMP1-202ENST00000377017 OVOS1Q6IE37 1185 aa14.1□□□□□ -0.15
TIMP1-202ENST00000377017 PDE12Q6L8Q7 609 aaKnown RBP14.1□□□□□ -0.15
TIMP1-202ENST00000377017 ZNF280DQ6N043 979 aa14.1□□□□□ -0.15
TIMP1-202ENST00000377017 ANKS3Q6ZW76 656 aa14.1□□□□□ -0.15
TIMP1-202ENST00000377017 GPR65Q8IYL9 337 aa14.1□□□□□ -0.15
TIMP1-202ENST00000377017 VPS52Q8N1B4 723 aa14.1□□□□□ -0.15
TIMP1-202ENST00000377017 THEM5Q8N1Q8 247 aa14.1□□□□□ -0.15
TIMP1-202ENST00000377017 PDCL2Q8N4E4 241 aa14.1□□□□□ -0.15
TIMP1-202ENST00000377017 SPPL3Q8TCT6 385 aa14.1□□□□□ -0.15
TIMP1-202ENST00000377017 POF1BQ8WVV4 589 aa14.1□□□□□ -0.15
TIMP1-202ENST00000377017 JAKMIP2Q96AA8 810 aa14.1□□□□□ -0.15
TIMP1-202ENST00000377017 IQCDQ96DY2 449 aa14.1□□□□□ -0.15
TIMP1-202ENST00000377017 BCO2Q9BYV7 579 aa14.1□□□□□ -0.15
TIMP1-202ENST00000377017 SNX25Q9H3E2 840 aa14.1□□□□□ -0.15
TIMP1-202ENST00000377017 CERS4Q9HA82 394 aa14.1□□□□□ -0.15
TIMP1-202ENST00000377017 ALG13Q9NP73 1137 aaKnown RBP14.1□□□□□ -0.15
TIMP1-202ENST00000377017 ENTPD7Q9NQZ7 604 aa14.1□□□□□ -0.15
TIMP1-202ENST00000377017 TLR9Q9NR96 1032 aa14.1□□□□□ -0.15
TIMP1-202ENST00000377017 MRPL17Q9NRX2 175 aaKnown RBP14.1□□□□□ -0.15
TIMP1-202ENST00000377017 POLIQ9UNA4 740 aa14.1□□□□□ -0.15
TIMP1-202ENST00000377017 SIK3Q9Y2K2 1263 aa14.1□□□□□ -0.15
TIMP1-202ENST00000377017 TSC2P49815 1807 aa14.1□□□□□ -0.15
TIMP1-202ENST00000377017 TRIOBPQ9H2D6 2365 aa14.1□□□□□ -0.15
TIMP1-202ENST00000377017 VWA8A3KMH1 1905 aa14.09□□□□□ -0.15
TIMP1-202ENST00000377017 LRRN2O75325 713 aa14.09□□□□□ -0.15
TIMP1-202ENST00000377017 EFEMP2O95967 443 aa14.09□□□□□ -0.15
TIMP1-202ENST00000377017 CTSAP10619 480 aa14.09□□□□□ -0.15
TIMP1-202ENST00000377017 WARSP23381 471 aaKnown RBP14.09□□□□□ -0.15
TIMP1-202ENST00000377017 IGFBP6P24592 240 aaPredicted RBP14.09□□□□□ -0.15
TIMP1-202ENST00000377017 DSG1Q02413 1049 aa14.09□□□□□ -0.15
TIMP1-202ENST00000377017 SMC1AQ14683 1233 aaKnown RBP14.09□□□□□ -0.15
TIMP1-202ENST00000377017 PTPROQ16827 1216 aa14.09□□□□□ -0.15
TIMP1-202ENST00000377017 SOWAHAQ2M3V2 549 aa14.09□□□□□ -0.15
TIMP1-202ENST00000377017 VARS2Q5ST30 1063 aaKnown RBP14.09□□□□□ -0.15
TIMP1-202ENST00000377017 ZNF697Q5TEC3 545 aa14.09□□□□□ -0.15
TIMP1-202ENST00000377017 KLHDC7AQ5VTJ3 777 aa14.09□□□□□ -0.15
TIMP1-202ENST00000377017 WSCD1Q658N2 575 aa14.09□□□□□ -0.15
TIMP1-202ENST00000377017 TMC7Q7Z402 723 aa14.09□□□□□ -0.15
TIMP1-202ENST00000377017 SPRED2Q7Z698 418 aa14.09□□□□□ -0.15
TIMP1-202ENST00000377017 OR6B3Q8NGW1 331 aa14.09□□□□□ -0.15
TIMP1-202ENST00000377017 RIN2Q8WYP3 895 aaPredicted RBP14.09□□□□□ -0.15
TIMP1-202ENST00000377017 PIK3R5Q8WYR1 880 aa14.09□□□□□ -0.15
TIMP1-202ENST00000377017 TATDN2Q93075 761 aa14.09□□□□□ -0.15
TIMP1-202ENST00000377017 NUP58Q9BVL2 599 aa14.09□□□□□ -0.15
TIMP1-202ENST00000377017 VN1R3Q9BXE9 311 aa14.09□□□□□ -0.15
TIMP1-202ENST00000377017 ZBP1Q9H171 429 aa14.09□□□□□ -0.15
TIMP1-202ENST00000377017 SMYD3Q9H7B4 428 aa14.09□□□□□ -0.15
TIMP1-202ENST00000377017 UBE2TQ9NPD8 197 aaPredicted RBP14.09□□□□□ -0.15
TIMP1-202ENST00000377017 NGRNQ9NPE2 291 aaKnown RBP14.09□□□□□ -0.15
TIMP1-202ENST00000377017 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.09□□□□□ -0.154e-7■□□□□ 10.7
TIMP1-202ENST00000377017 CHST7Q9NS84 486 aa14.09□□□□□ -0.15
TIMP1-202ENST00000377017 FAM207AQ9NSI2 230 aaPredicted RBP14.09□□□□□ -0.15
TIMP1-202ENST00000377017 L1RE1Q9UN81 338 aa14.09□□□□□ -0.15
TIMP1-202ENST00000377017 COL4A4P53420 1690 aaPredicted RBP14.08□□□□□ -0.16
TIMP1-202ENST00000377017 UCHL3P15374 230 aa14.08□□□□□ -0.16
TIMP1-202ENST00000377017 PCSK1P29120 753 aa14.08□□□□□ -0.16
TIMP1-202ENST00000377017 CA8P35219 290 aa14.08□□□□□ -0.16
TIMP1-202ENST00000377017 GNL1P36915 607 aaPredicted RBP14.08□□□□□ -0.16
TIMP1-202ENST00000377017 PSMD5Q16401 504 aa14.08□□□□□ -0.16
TIMP1-202ENST00000377017 RTP2Q5QGT7 225 aa14.08□□□□□ -0.16
TIMP1-202ENST00000377017 PHLDB3Q6NSJ2 640 aa14.08□□□□□ -0.16
TIMP1-202ENST00000377017 RRAGAQ7L523 313 aa14.08□□□□□ -0.16
TIMP1-202ENST00000377017 LIMS2Q7Z4I7 341 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms