RNA–Protein interactions for RNA: ENST00000376806.9

HLA-A-202, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,854 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-202ENST00000376806 TRIM7Q9C029 511 aa17.9■□□□□ 0.46
HLA-A-202ENST00000376806 PLEKHA4Q9H4M7 779 aa17.9■□□□□ 0.46
HLA-A-202ENST00000376806 VIPAS39Q9H9C1 493 aa17.9■□□□□ 0.46
HLA-A-202ENST00000376806 EPB41L5Q9HCM4 733 aa17.9■□□□□ 0.46
HLA-A-202ENST00000376806 RNF186Q9NXI6 227 aa17.9■□□□□ 0.46
HLA-A-202ENST00000376806 GINS2Q9Y248 185 aa17.9■□□□□ 0.46
HLA-A-202ENST00000376806 C2CD2Q9Y426 696 aa17.9■□□□□ 0.46
HLA-A-202ENST00000376806 SART1O43290 800 aaKnown RBP17.89■□□□□ 0.45
HLA-A-202ENST00000376806 CTGFP29279 349 aa17.89■□□□□ 0.45
HLA-A-202ENST00000376806 ATICP31939 592 aa17.89■□□□□ 0.45
HLA-A-202ENST00000376806 AADACL2Q6P093 401 aa17.89■□□□□ 0.45
HLA-A-202ENST00000376806 CATSPER4Q7RTX7 472 aa17.89■□□□□ 0.45
HLA-A-202ENST00000376806 APBB1IPQ7Z5R6 666 aaPredicted RBP17.89■□□□□ 0.45
HLA-A-202ENST00000376806 NT5DC4Q86YG4 428 aa17.89■□□□□ 0.45
HLA-A-202ENST00000376806 CASKIN2Q8WXE0 1202 aa17.89■□□□□ 0.45
HLA-A-202ENST00000376806 GDAP1L1Q96MZ0 367 aa17.89■□□□□ 0.45
HLA-A-202ENST00000376806 ACBD3Q9H3P7 528 aa17.89■□□□□ 0.45
HLA-A-202ENST00000376806 VRTNQ9H8Y1 702 aa17.89■□□□□ 0.45
HLA-A-202ENST00000376806 HPCAL4Q9UM19 191 aa17.89■□□□□ 0.45
HLA-A-202ENST00000376806 PCDHA3Q9Y5H8 950 aa17.89■□□□□ 0.45
HLA-A-202ENST00000376806 SCINQ9Y6U3 715 aa17.89■□□□□ 0.45
HLA-A-202ENST00000376806 CASP8AP2Q9UKL3 1982 aa17.88■□□□□ 0.45
HLA-A-202ENST00000376806 GOLGA6L10A0A0M3HER8 536 aa17.88■□□□□ 0.45
HLA-A-202ENST00000376806 ESYT3A0FGR9 886 aa17.88■□□□□ 0.45
HLA-A-202ENST00000376806 DARSP14868 501 aaKnown RBP17.88■□□□□ 0.45
HLA-A-202ENST00000376806 OAS2P29728 719 aaKnown RBP17.88■□□□□ 0.45
HLA-A-202ENST00000376806 POLR2BP30876 1174 aaKnown RBP17.88■□□□□ 0.45
HLA-A-202ENST00000376806 PAK2Q13177 524 aa17.88■□□□□ 0.45
HLA-A-202ENST00000376806 WDR72Q3MJ13 1102 aa17.88■□□□□ 0.45
HLA-A-202ENST00000376806 SLC27A1Q6PCB7 646 aa17.88■□□□□ 0.45
HLA-A-202ENST00000376806 EMBQ6PCB8 327 aa17.88■□□□□ 0.45
HLA-A-202ENST00000376806 REM2Q8IYK8 340 aaPredicted RBP17.88■□□□□ 0.45
HLA-A-202ENST00000376806 C1orf131Q8NDD1 294 aaKnown RBP17.88■□□□□ 0.45
HLA-A-202ENST00000376806 KATNAL1Q9BW62 490 aa17.88■□□□□ 0.45
HLA-A-202ENST00000376806 SDCBP2Q9H190 292 aa17.88■□□□□ 0.45
HLA-A-202ENST00000376806 SMYD3Q9H7B4 428 aa17.88■□□□□ 0.45
HLA-A-202ENST00000376806 CDHR5Q9HBB8 845 aa17.88■□□□□ 0.45
HLA-A-202ENST00000376806 ITGA11Q9UKX5 1188 aa17.88■□□□□ 0.45
HLA-A-202ENST00000376806 PCDHGC3Q9UN70 934 aa17.88■□□□□ 0.45
HLA-A-202ENST00000376806 SCN1AP35498 2009 aa17.88■□□□□ 0.45
HLA-A-202ENST00000376806 THSD7BQ9C0I4 1608 aa17.88■□□□□ 0.45
HLA-A-202ENST00000376806 ALDH1A1P00352 501 aa17.88■□□□□ 0.45
HLA-A-202ENST00000376806 MMP8P22894 467 aa17.88■□□□□ 0.45
HLA-A-202ENST00000376806 HOXA11P31270 313 aaPredicted RBP17.88■□□□□ 0.45
HLA-A-202ENST00000376806 CARSP49589 748 aaKnown RBP17.88■□□□□ 0.45
HLA-A-202ENST00000376806 GPS2Q13227 327 aa17.88■□□□□ 0.45
HLA-A-202ENST00000376806 PCBP1Q15365 356 aaKnown RBP eCLIP17.88■□□□□ 0.454e-31■■□□□ 13.8
HLA-A-202ENST00000376806 PLEKHA7Q6IQ23 1121 aa17.88■□□□□ 0.45
HLA-A-202ENST00000376806 SND1Q7KZF4 910 aaKnown RBP eCLIP17.88■□□□□ 0.453e-14■■■■□ 20
HLA-A-202ENST00000376806 CD302Q8IX05 232 aa17.88■□□□□ 0.45
HLA-A-202ENST00000376806 TMEM35BQ8NCS4 154 aa17.88■□□□□ 0.45
HLA-A-202ENST00000376806 TFAP2BQ92481 460 aa17.88■□□□□ 0.45
HLA-A-202ENST00000376806 CAVIN3Q969G5 261 aa17.88■□□□□ 0.45
HLA-A-202ENST00000376806 MRPL47Q9HD33 250 aaKnown RBP17.88■□□□□ 0.45
HLA-A-202ENST00000376806 NR2E1Q9Y466 385 aa17.88■□□□□ 0.45
HLA-A-202ENST00000376806 SCN10AQ9Y5Y9 1956 aa17.88■□□□□ 0.45
HLA-A-202ENST00000376806 BHMG1C9JSJ3 638 aaPredicted RBP17.87■□□□□ 0.45
HLA-A-202ENST00000376806 H3BQF6 201 aa17.87■□□□□ 0.45
HLA-A-202ENST00000376806 MYO1FO00160 1098 aa17.87■□□□□ 0.45
HLA-A-202ENST00000376806 CALB1P05937 261 aa17.87■□□□□ 0.45
HLA-A-202ENST00000376806 AKR1A1P14550 325 aa17.87■□□□□ 0.45
HLA-A-202ENST00000376806 CDH5P33151 784 aaPredicted RBP17.87■□□□□ 0.45
HLA-A-202ENST00000376806 SLC1A1P43005 524 aa17.87■□□□□ 0.45
HLA-A-202ENST00000376806 GUCY2FP51841 1108 aa17.87■□□□□ 0.45
HLA-A-202ENST00000376806 RWDD2BP57060 319 aa17.87■□□□□ 0.45
HLA-A-202ENST00000376806 MAMLD1Q13495 774 aa17.87■□□□□ 0.45
HLA-A-202ENST00000376806 PPP2R5EQ16537 467 aa17.87■□□□□ 0.45
HLA-A-202ENST00000376806 FSCN1Q16658 493 aaKnown RBP17.87■□□□□ 0.45
HLA-A-202ENST00000376806 NOTUMQ6P988 496 aa17.87■□□□□ 0.45
HLA-A-202ENST00000376806 ADAT2Q7Z6V5 191 aaKnown RBP17.87■□□□□ 0.45
HLA-A-202ENST00000376806 CCDC26Q8TAB7 109 aa17.87■□□□□ 0.45
HLA-A-202ENST00000376806 DNAJB3Q8WWF6 145 aa17.87■□□□□ 0.45
HLA-A-202ENST00000376806 KIF12Q96FN5 646 aa17.87■□□□□ 0.45
HLA-A-202ENST00000376806 ZNF518BQ9C0D4 1074 aa17.87■□□□□ 0.45
HLA-A-202ENST00000376806 ERVK-5Q9HDB9 667 aa17.87■□□□□ 0.45
HLA-A-202ENST00000376806 TREHO43280 583 aa17.86■□□□□ 0.45
HLA-A-202ENST00000376806 PROSCO94903 275 aa17.86■□□□□ 0.45
HLA-A-202ENST00000376806 PAEPP09466 180 aa17.86■□□□□ 0.45
HLA-A-202ENST00000376806 PYGMP11217 842 aa17.86■□□□□ 0.45
HLA-A-202ENST00000376806 P4HA1P13674 534 aa17.86■□□□□ 0.45
HLA-A-202ENST00000376806 LACTBP83111 547 aaPredicted RBP17.86■□□□□ 0.45
HLA-A-202ENST00000376806 CAP1Q01518 475 aa17.86■□□□□ 0.45
HLA-A-202ENST00000376806 TRPV1Q8NER1 839 aa17.86■□□□□ 0.45
HLA-A-202ENST00000376806 IFT81Q8WYA0 676 aa17.86■□□□□ 0.45
HLA-A-202ENST00000376806 SNX27Q96L92 541 aa17.86■□□□□ 0.45
HLA-A-202ENST00000376806 EIF2AQ9BY44 585 aaKnown RBP17.86■□□□□ 0.45
HLA-A-202ENST00000376806 DPP3Q9NY33 737 aa17.86■□□□□ 0.45
HLA-A-202ENST00000376806 AMACRQ9UHK6 382 aa17.86■□□□□ 0.45
HLA-A-202ENST00000376806 NFU1Q9UMS0 254 aa17.86■□□□□ 0.45
HLA-A-202ENST00000376806 AGAP1Q9UPQ3 857 aa17.86■□□□□ 0.45
HLA-A-202ENST00000376806 C17orf102A2RUQ5 167 aa17.86■□□□□ 0.45
HLA-A-202ENST00000376806 STAU1O95793 577 aaKnown RBP17.86■□□□□ 0.45
HLA-A-202ENST00000376806 CD19P15391 556 aa17.86■□□□□ 0.45
HLA-A-202ENST00000376806 HOXC8P31273 242 aa17.86■□□□□ 0.45
HLA-A-202ENST00000376806 RAD23BP54727 409 aa17.86■□□□□ 0.45
HLA-A-202ENST00000376806 CDH8P55286 799 aa17.86■□□□□ 0.45
HLA-A-202ENST00000376806 ZNF200P98182 395 aaPredicted RBP17.86■□□□□ 0.45
HLA-A-202ENST00000376806 PURAQ00577 322 aaKnown RBP17.86■□□□□ 0.45
HLA-A-202ENST00000376806 NNTQ13423 1086 aa17.86■□□□□ 0.45
HLA-A-202ENST00000376806 HPDLQ96IR7 371 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms