RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 ITGA8P53708 1063 aa10.19□□□□□ -0.78
TRIM39-202ENST00000376659 MBTD1Q05BQ5 628 aa10.19□□□□□ -0.78
TRIM39-202ENST00000376659 GALNTL6Q49A17 601 aa10.19□□□□□ -0.78
TRIM39-202ENST00000376659 B4GALNT4Q76KP1 1039 aa10.19□□□□□ -0.78
TRIM39-202ENST00000376659 MZB1Q8WU39 189 aa10.19□□□□□ -0.78
TRIM39-202ENST00000376659 KATNBL1Q9H079 304 aa10.19□□□□□ -0.78
TRIM39-202ENST00000376659 TXNRD2Q9NNW7 524 aa10.19□□□□□ -0.78
TRIM39-202ENST00000376659 CTNNAL1Q9UBT7 734 aa10.19□□□□□ -0.78
TRIM39-202ENST00000376659 DNAH12Q6ZR08 3092 aa10.19□□□□□ -0.78
TRIM39-202ENST00000376659 FOXO6A8MYZ6 492 aa10.19□□□□□ -0.78
TRIM39-202ENST00000376659 E7EVH7 732 aa10.19□□□□□ -0.78
TRIM39-202ENST00000376659 ZBTB7AO95365 584 aa10.19□□□□□ -0.78
TRIM39-202ENST00000376659 TTC4O95801 387 aa10.19□□□□□ -0.78
TRIM39-202ENST00000376659 ABHD2P08910 425 aa10.19□□□□□ -0.78
TRIM39-202ENST00000376659 TBXAS1P24557 533 aaPredicted RBP10.19□□□□□ -0.78
TRIM39-202ENST00000376659 LIG4P49917 911 aa10.19□□□□□ -0.78
TRIM39-202ENST00000376659 ARSEP51690 589 aa10.19□□□□□ -0.78
TRIM39-202ENST00000376659 POLGP54098 1239 aaPredicted RBP10.19□□□□□ -0.78
TRIM39-202ENST00000376659 SEZ6Q53EL9 994 aa10.19□□□□□ -0.78
TRIM39-202ENST00000376659 DENND2CQ68D51 928 aa10.19□□□□□ -0.78
TRIM39-202ENST00000376659 SLFN12LQ6IEE8 588 aa10.19□□□□□ -0.78
TRIM39-202ENST00000376659 MMS22LQ6ZRQ5 1243 aa10.19□□□□□ -0.78
TRIM39-202ENST00000376659 HOOK3Q86VS8 718 aa10.19□□□□□ -0.78
TRIM39-202ENST00000376659 ARFGAP2Q8N6H7 521 aa10.19□□□□□ -0.78
TRIM39-202ENST00000376659 MAML1Q92585 1016 aa10.19□□□□□ -0.78
TRIM39-202ENST00000376659 HOXC10Q9NYD6 342 aa10.19□□□□□ -0.78
TRIM39-202ENST00000376659 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.19□□□□□ -0.78
TRIM39-202ENST00000376659 CENPFP49454 3210 aa10.19□□□□□ -0.78
TRIM39-202ENST00000376659 SPOPO43791 374 aa10.19□□□□□ -0.78
TRIM39-202ENST00000376659 C1QAP02745 245 aa10.19□□□□□ -0.78
TRIM39-202ENST00000376659 USP8P40818 1118 aa10.19□□□□□ -0.78
TRIM39-202ENST00000376659 CDKN2BP42772 138 aa10.19□□□□□ -0.78
TRIM39-202ENST00000376659 GABRB2P47870 512 aa10.19□□□□□ -0.78
TRIM39-202ENST00000376659 GNPTABQ3T906 1256 aa10.19□□□□□ -0.78
TRIM39-202ENST00000376659 PRUNE1Q86TP1 453 aa10.19□□□□□ -0.78
TRIM39-202ENST00000376659 FAM228AQ86W67 206 aa10.19□□□□□ -0.78
TRIM39-202ENST00000376659 IFNLR1Q8IU57 520 aaPredicted RBP10.19□□□□□ -0.78
TRIM39-202ENST00000376659 ZCCHC9Q8N567 271 aaKnown RBP10.19□□□□□ -0.78
TRIM39-202ENST00000376659 ALLCQ8N6M5 410 aa10.19□□□□□ -0.78
TRIM39-202ENST00000376659 NLGN2Q8NFZ4 835 aa10.19□□□□□ -0.78
TRIM39-202ENST00000376659 ZNF606Q8WXB4 792 aa10.19□□□□□ -0.78
TRIM39-202ENST00000376659 IFT74Q96LB3 600 aa10.19□□□□□ -0.78
TRIM39-202ENST00000376659 SERPINB12Q96P63 405 aa10.19□□□□□ -0.78
TRIM39-202ENST00000376659 DHRS4Q9BTZ2 278 aa10.19□□□□□ -0.78
TRIM39-202ENST00000376659 PICK1Q9NRD5 415 aa10.19□□□□□ -0.78
TRIM39-202ENST00000376659 hCG_1818297A0A087WSY0 165 aa10.18□□□□□ -0.78
TRIM39-202ENST00000376659 B4GALT4O60513 344 aa10.18□□□□□ -0.78
TRIM39-202ENST00000376659 LDHAP00338 332 aaKnown RBP10.18□□□□□ -0.78
TRIM39-202ENST00000376659 NCOA4Q13772 614 aa10.18□□□□□ -0.78
TRIM39-202ENST00000376659 ATP13A4Q4VNC1 1196 aa10.18□□□□□ -0.78
TRIM39-202ENST00000376659 SGO2Q562F6 1265 aa10.18□□□□□ -0.78
TRIM39-202ENST00000376659 GPAT2Q6NUI2 795 aa10.18□□□□□ -0.78
TRIM39-202ENST00000376659 METTL7BQ6UX53 244 aa10.18□□□□□ -0.78
TRIM39-202ENST00000376659 PLPPR4Q7Z2D5 763 aa10.18□□□□□ -0.78
TRIM39-202ENST00000376659 CCDC13Q8IYE1 715 aa10.18□□□□□ -0.78
TRIM39-202ENST00000376659 GPC2Q8N158 579 aa10.18□□□□□ -0.78
TRIM39-202ENST00000376659 FAM107BQ9H098 131 aa10.18□□□□□ -0.78
TRIM39-202ENST00000376659 MINDY3Q9H8M7 445 aa10.18□□□□□ -0.78
TRIM39-202ENST00000376659 TJP2Q9UDY2 1190 aa10.18□□□□□ -0.78
TRIM39-202ENST00000376659 KCNH4Q9UQ05 1017 aa10.18□□□□□ -0.78
TRIM39-202ENST00000376659 GHRP10912 638 aa10.18□□□□□ -0.78
TRIM39-202ENST00000376659 SSTR3P32745 418 aaPredicted RBP10.18□□□□□ -0.78
TRIM39-202ENST00000376659 TCF7P36402 384 aaPredicted RBP10.18□□□□□ -0.78
TRIM39-202ENST00000376659 BPIFB4P59827 614 aa10.18□□□□□ -0.78
TRIM39-202ENST00000376659 LAMTOR4Q0VGL1 99 aa10.18□□□□□ -0.78
TRIM39-202ENST00000376659 LY6KQ17RY6 165 aa10.18□□□□□ -0.78
TRIM39-202ENST00000376659 C6orf118Q5T5N4 469 aa10.18□□□□□ -0.78
TRIM39-202ENST00000376659 TRNP1Q6NT89 227 aa10.18□□□□□ -0.78
TRIM39-202ENST00000376659 PASD1Q8IV76 773 aa10.18□□□□□ -0.78
TRIM39-202ENST00000376659 TMEM192Q8IY95 271 aa10.18□□□□□ -0.78
TRIM39-202ENST00000376659 SLC35B2Q8TB61 432 aa10.18□□□□□ -0.78
TRIM39-202ENST00000376659 FEZF2Q8TBJ5 459 aa10.18□□□□□ -0.78
TRIM39-202ENST00000376659 PRPF31Q8WWY3 499 aaKnown RBP10.18□□□□□ -0.78
TRIM39-202ENST00000376659 CHMP6Q96FZ7 201 aa10.18□□□□□ -0.78
TRIM39-202ENST00000376659 MSTO1Q9BUK6 570 aa10.18□□□□□ -0.78
TRIM39-202ENST00000376659 FHDC1Q9C0D6 1143 aaPredicted RBP10.18□□□□□ -0.78
TRIM39-202ENST00000376659 MTMR12Q9C0I1 747 aa10.18□□□□□ -0.78
TRIM39-202ENST00000376659 SPATC1LQ9H0A9 340 aa10.18□□□□□ -0.78
TRIM39-202ENST00000376659 VRTNQ9H8Y1 702 aa10.18□□□□□ -0.78
TRIM39-202ENST00000376659 IFT122Q9HBG6 1241 aa10.18□□□□□ -0.78
TRIM39-202ENST00000376659 GRID1Q9ULK0 1009 aa10.18□□□□□ -0.78
TRIM39-202ENST00000376659 ZMYND8Q9ULU4 1186 aaPredicted RBP10.18□□□□□ -0.78
TRIM39-202ENST00000376659 TGFB3P10600 412 aa10.17□□□□□ -0.78
TRIM39-202ENST00000376659 KRT5P13647 590 aa10.17□□□□□ -0.78
TRIM39-202ENST00000376659 CYP3A5P20815 502 aa10.17□□□□□ -0.78
TRIM39-202ENST00000376659 MGAT5Q09328 741 aa10.17□□□□□ -0.78
TRIM39-202ENST00000376659 FAM187BQ17R55 369 aa10.17□□□□□ -0.78
TRIM39-202ENST00000376659 HSDL1Q3SXM5 330 aa10.17□□□□□ -0.78
TRIM39-202ENST00000376659 CELF3Q5SZQ8 465 aaKnown RBP10.17□□□□□ -0.78
TRIM39-202ENST00000376659 RNASEH2BQ5TBB1 312 aaKnown RBP10.17□□□□□ -0.78
TRIM39-202ENST00000376659 USP37Q86T82 979 aa10.17□□□□□ -0.78
TRIM39-202ENST00000376659 TDRPQ86YL5 185 aa10.17□□□□□ -0.78
TRIM39-202ENST00000376659 RHOT1Q8IXI2 618 aa10.17□□□□□ -0.78
TRIM39-202ENST00000376659 ZNF276Q8N554 614 aa10.17□□□□□ -0.78
TRIM39-202ENST00000376659 DENND1AQ8TEH3 1009 aa10.17□□□□□ -0.78
TRIM39-202ENST00000376659 NKD2Q969F2 451 aaPredicted RBP10.17□□□□□ -0.78
TRIM39-202ENST00000376659 FAXDC2Q96IV6 333 aa10.17□□□□□ -0.78
TRIM39-202ENST00000376659 C11orf70Q9BRQ4 267 aa10.17□□□□□ -0.78
TRIM39-202ENST00000376659 TRAIPQ9BWF2 469 aa10.17□□□□□ -0.78
TRIM39-202ENST00000376659 KDM4CQ9H3R0 1056 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms