RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 HIRAP54198 1017 aaPredicted RBP15.17■□□□□ 0.02
TNFRSF1B-201ENST00000376259 YARSP54577 528 aaKnown RBP15.17■□□□□ 0.02
TNFRSF1B-201ENST00000376259 CDH8P55286 799 aa15.17■□□□□ 0.02
TNFRSF1B-201ENST00000376259 CAPRIN2Q6IMN6 1127 aaKnown RBP15.17■□□□□ 0.02
TNFRSF1B-201ENST00000376259 GPATCH2LQ9NWQ4 482 aa15.17■□□□□ 0.02
TNFRSF1B-201ENST00000376259 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.17■□□□□ 0.022e-7■□□□□ 9
TNFRSF1B-201ENST00000376259 UBE4BO95155 1302 aa15.17■□□□□ 0.02
TNFRSF1B-201ENST00000376259 UMODL1Q5DID0 1318 aa15.17■□□□□ 0.02
TNFRSF1B-201ENST00000376259 ENTPD5O75356 428 aa15.16■□□□□ 0.02
TNFRSF1B-201ENST00000376259 RASSF9O75901 435 aa15.16■□□□□ 0.02
TNFRSF1B-201ENST00000376259 ENO1P06733 434 aaKnown RBP15.16■□□□□ 0.02
TNFRSF1B-201ENST00000376259 APRTP07741 180 aa15.16■□□□□ 0.02
TNFRSF1B-201ENST00000376259 NUDT17P0C025 328 aa15.16■□□□□ 0.02
TNFRSF1B-201ENST00000376259 LMNB2Q03252 620 aa15.16■□□□□ 0.02
TNFRSF1B-201ENST00000376259 TAF1BQ53T94 588 aaPredicted RBP15.16■□□□□ 0.02
TNFRSF1B-201ENST00000376259 MIS18BP1Q6P0N0 1132 aa15.16■□□□□ 0.02
TNFRSF1B-201ENST00000376259 MCPH1Q8NEM0 835 aa15.16■□□□□ 0.02
TNFRSF1B-201ENST00000376259 FAM151AQ8WW52 585 aa15.16■□□□□ 0.02
TNFRSF1B-201ENST00000376259 SPDYE2BA6NHP3 402 aa15.16■□□□□ 0.02
TNFRSF1B-201ENST00000376259 TNNC2P02585 160 aa15.16■□□□□ 0.02
TNFRSF1B-201ENST00000376259 SPDYE6P0CI01 402 aa15.16■□□□□ 0.02
TNFRSF1B-201ENST00000376259 KRT3P12035 628 aa15.16■□□□□ 0.02
TNFRSF1B-201ENST00000376259 ARFIP2P53365 341 aa15.16■□□□□ 0.02
TNFRSF1B-201ENST00000376259 CDH6P55285 790 aa15.16■□□□□ 0.02
TNFRSF1B-201ENST00000376259 NCALDP61601 193 aa15.16■□□□□ 0.02
TNFRSF1B-201ENST00000376259 FEZF2Q8TBJ5 459 aa15.16■□□□□ 0.02
TNFRSF1B-201ENST00000376259 ACTL9Q8TC94 416 aa15.16■□□□□ 0.02
TNFRSF1B-201ENST00000376259 SHC3Q92529 594 aa15.16■□□□□ 0.02
TNFRSF1B-201ENST00000376259 FAM149B1Q96BN6 582 aa15.16■□□□□ 0.02
TNFRSF1B-201ENST00000376259 TLCD1Q96CP7 247 aa15.16■□□□□ 0.02
TNFRSF1B-201ENST00000376259 SENP7Q9BQF6 1050 aa15.16■□□□□ 0.02
TNFRSF1B-201ENST00000376259 PDCD2LQ9BRP1 358 aa15.16■□□□□ 0.02
TNFRSF1B-201ENST00000376259 ROPN1BQ9BZX4 212 aaPredicted RBP15.16■□□□□ 0.02
TNFRSF1B-201ENST00000376259 ROPN1Q9HAT0 212 aaPredicted RBP15.16■□□□□ 0.02
TNFRSF1B-201ENST00000376259 PARVAQ9NVD7 372 aa15.16■□□□□ 0.02
TNFRSF1B-201ENST00000376259 SCINQ9Y6U3 715 aa15.16■□□□□ 0.02
TNFRSF1B-201ENST00000376259 DKC1O60832 514 aaKnown RBP eCLIP15.16■□□□□ 0.02
TNFRSF1B-201ENST00000376259 HAUS5O94927 633 aa15.16■□□□□ 0.02
TNFRSF1B-201ENST00000376259 CTCFP49711 727 aaPredicted RBP15.16■□□□□ 0.02
TNFRSF1B-201ENST00000376259 ATXN3P54252 364 aaPredicted RBP15.16■□□□□ 0.02
TNFRSF1B-201ENST00000376259 ARL4CP56559 192 aa15.16■□□□□ 0.02
TNFRSF1B-201ENST00000376259 NBPF20Q3BBV1 942 aa15.16■□□□□ 0.02
TNFRSF1B-201ENST00000376259 FAM102AQ5T9C2 384 aaPredicted RBP15.16■□□□□ 0.02
TNFRSF1B-201ENST00000376259 OR5B17Q8NGF7 314 aa15.16■□□□□ 0.02
TNFRSF1B-201ENST00000376259 PPP1R13LQ8WUF5 828 aa15.16■□□□□ 0.02
TNFRSF1B-201ENST00000376259 VTI1AQ96AJ9 217 aa15.16■□□□□ 0.02
TNFRSF1B-201ENST00000376259 TRIM55Q9BYV6 548 aa15.16■□□□□ 0.02
TNFRSF1B-201ENST00000376259 PCYOX1Q9UHG3 505 aa15.16■□□□□ 0.02
TNFRSF1B-201ENST00000376259 TELO2Q9Y4R8 837 aa15.16■□□□□ 0.02
TNFRSF1B-201ENST00000376259 PCNTO95613 3336 aa15.16■□□□□ 0.02
TNFRSF1B-201ENST00000376259 ASAP2O43150 1006 aa15.15■□□□□ 0.02
TNFRSF1B-201ENST00000376259 RBP3P10745 1247 aa15.15■□□□□ 0.02
TNFRSF1B-201ENST00000376259 DESP17661 470 aa15.15■□□□□ 0.02
TNFRSF1B-201ENST00000376259 MYL6P60660 151 aa15.15■□□□□ 0.02
TNFRSF1B-201ENST00000376259 CUL2Q13617 745 aa15.15■□□□□ 0.02
TNFRSF1B-201ENST00000376259 PREPLQ4J6C6 727 aaPredicted RBP15.15■□□□□ 0.02
TNFRSF1B-201ENST00000376259 NAIF1Q69YI7 327 aaPredicted RBP15.15■□□□□ 0.02
TNFRSF1B-201ENST00000376259 TRIM50Q86XT4 487 aa15.15■□□□□ 0.02
TNFRSF1B-201ENST00000376259 CERKQ8TCT0 537 aa15.15■□□□□ 0.02
TNFRSF1B-201ENST00000376259 ART4Q93070 314 aa15.15■□□□□ 0.02
TNFRSF1B-201ENST00000376259 RBM41Q96IZ5 413 aaKnown RBP15.15■□□□□ 0.02
TNFRSF1B-201ENST00000376259 IDI2Q9BXS1 227 aa15.15■□□□□ 0.02
TNFRSF1B-201ENST00000376259 MOV10L1Q9BXT6 1211 aaKnown RBP15.15■□□□□ 0.02
TNFRSF1B-201ENST00000376259 RAB6BQ9NRW1 208 aa15.15■□□□□ 0.02
TNFRSF1B-201ENST00000376259 PROSCO94903 275 aa15.15■□□□□ 0.02
TNFRSF1B-201ENST00000376259 ICAM1P05362 532 aa15.15■□□□□ 0.02
TNFRSF1B-201ENST00000376259 ADSSP30520 456 aa15.15■□□□□ 0.02
TNFRSF1B-201ENST00000376259 EIF3EP60228 445 aaKnown RBP15.15■□□□□ 0.02
TNFRSF1B-201ENST00000376259 MRPS9P82933 396 aaKnown RBP15.15■□□□□ 0.02
TNFRSF1B-201ENST00000376259 OTUD4Q01804 1114 aaKnown RBP15.15■□□□□ 0.02
TNFRSF1B-201ENST00000376259 MPP2Q14168 576 aa15.15■□□□□ 0.02
TNFRSF1B-201ENST00000376259 EMC2Q15006 297 aa15.15■□□□□ 0.02
TNFRSF1B-201ENST00000376259 PSMD6Q15008 389 aa15.15■□□□□ 0.02
TNFRSF1B-201ENST00000376259 PLCB4Q15147 1175 aa15.15■□□□□ 0.02
TNFRSF1B-201ENST00000376259 CFAP157Q5JU67 520 aa15.15■□□□□ 0.02
TNFRSF1B-201ENST00000376259 C15orf52Q6ZUT6 534 aaKnown RBP15.15■□□□□ 0.02
TNFRSF1B-201ENST00000376259 ANO5Q75V66 913 aa15.15■□□□□ 0.02
TNFRSF1B-201ENST00000376259 ATXN2LQ8WWM7 1075 aaKnown RBP15.15■□□□□ 0.02
TNFRSF1B-201ENST00000376259 HERPUD2Q9BSE4 406 aa15.15■□□□□ 0.02
TNFRSF1B-201ENST00000376259 DNAJC5Q9H3Z4 198 aa15.15■□□□□ 0.02
TNFRSF1B-201ENST00000376259 GEMIN8Q9NWZ8 242 aaKnown RBP15.15■□□□□ 0.02
TNFRSF1B-201ENST00000376259 HEY2Q9UBP5 337 aa15.15■□□□□ 0.02
TNFRSF1B-201ENST00000376259 CCNE2O96020 404 aa15.15■□□□□ 0.02
TNFRSF1B-201ENST00000376259 ACTR2P61160 394 aa15.15■□□□□ 0.02
TNFRSF1B-201ENST00000376259 BMPR2Q13873 1038 aa15.15■□□□□ 0.02
TNFRSF1B-201ENST00000376259 ITIH4Q14624 930 aa15.15■□□□□ 0.02
TNFRSF1B-201ENST00000376259 GADL1Q6ZQY3 521 aa15.15■□□□□ 0.02
TNFRSF1B-201ENST00000376259 NLRP9Q7RTR0 991 aa15.15■□□□□ 0.02
TNFRSF1B-201ENST00000376259 TTLL6Q8N841 843 aa15.15■□□□□ 0.02
TNFRSF1B-201ENST00000376259 TMEM161BQ8NDZ6 487 aa15.15■□□□□ 0.02
TNFRSF1B-201ENST00000376259 NSUN6Q8TEA1 469 aaKnown RBP15.15■□□□□ 0.02
TNFRSF1B-201ENST00000376259 ZBTB10Q96DT7 871 aa15.15■□□□□ 0.02
TNFRSF1B-201ENST00000376259 GPR88Q9GZN0 384 aa15.15■□□□□ 0.02
TNFRSF1B-201ENST00000376259 ZNF302Q9NR11 478 aa15.15■□□□□ 0.02
TNFRSF1B-201ENST00000376259 SMYD2Q9NRG4 433 aa15.15■□□□□ 0.02
TNFRSF1B-201ENST00000376259 IP6K2Q9UHH9 426 aa15.15■□□□□ 0.02
TNFRSF1B-201ENST00000376259 XPO7Q9UIA9 1087 aaKnown RBP15.15■□□□□ 0.02
TNFRSF1B-201ENST00000376259 USH1CQ9Y6N9 552 aa15.15■□□□□ 0.02
TNFRSF1B-201ENST00000376259 ASTN2O75129 1339 aaPredicted RBP15.15■□□□□ 0.02
TNFRSF1B-201ENST00000376259 COPEO14579 308 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms