RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.91□□□□□ -1.3
UBR4-204ENST00000375254 GOLGA8SH3BPF8 625 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 DYNC1LI2O43237 492 aaPredicted RBP6.91□□□□□ -1.3
UBR4-204ENST00000375254 SRGNP10124 158 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 KCNQ4P56696 695 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 RFX6Q8HWS3 928 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 DHRSXQ8N5I4 330 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 TSPAN17Q96FV3 270 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 RAPGEFL1Q9UHV5 662 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 WDR19Q8NEZ3 1342 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 KITP10721 976 aa6.9□□□□□ -1.3
UBR4-204ENST00000375254 HK2P52789 917 aa6.9□□□□□ -1.3
UBR4-204ENST00000375254 CLVS1Q8IUQ0 354 aaPredicted RBP6.9□□□□□ -1.3
UBR4-204ENST00000375254 SH2D3CQ8N5H7 860 aa6.9□□□□□ -1.3
UBR4-204ENST00000375254 KBTBD8Q8NFY9 601 aa6.9□□□□□ -1.3
UBR4-204ENST00000375254 TBC1D10AQ9BXI6 508 aa6.9□□□□□ -1.3
UBR4-204ENST00000375254 CHMP1AQ9HD42 196 aaPredicted RBP6.9□□□□□ -1.3
UBR4-204ENST00000375254 SLC12A6Q9UHW9 1150 aa6.9□□□□□ -1.3
UBR4-204ENST00000375254 MYCP01106 439 aaPredicted RBP6.9□□□□□ -1.3
UBR4-204ENST00000375254 ANXA6P08133 673 aa6.9□□□□□ -1.3
UBR4-204ENST00000375254 CIITAP33076 1130 aa6.9□□□□□ -1.3
UBR4-204ENST00000375254 YAP1P46937 504 aaKnown RBP6.9□□□□□ -1.3
UBR4-204ENST00000375254 KPNA1P52294 538 aaPredicted RBP6.9□□□□□ -1.3
UBR4-204ENST00000375254 RAB2AP61019 212 aa6.9□□□□□ -1.3
UBR4-204ENST00000375254 SLC18A3Q16572 532 aa6.9□□□□□ -1.3
UBR4-204ENST00000375254 ERMARDQ5T6L9 678 aa6.9□□□□□ -1.3
UBR4-204ENST00000375254 BSPRYQ5W0U4 402 aa6.9□□□□□ -1.3
UBR4-204ENST00000375254 SLFN12LQ6IEE8 588 aa6.9□□□□□ -1.3
UBR4-204ENST00000375254 KRT35Q92764 455 aa6.9□□□□□ -1.3
UBR4-204ENST00000375254 CINPQ9BW66 212 aaPredicted RBP6.9□□□□□ -1.3
UBR4-204ENST00000375254 ZSCAN32Q9NX65 697 aa6.9□□□□□ -1.3
UBR4-204ENST00000375254 LRRIQ4A6NIV6 560 aa6.9□□□□□ -1.3
UBR4-204ENST00000375254 PER1O15534 1290 aaPredicted RBP6.9□□□□□ -1.3
UBR4-204ENST00000375254 PRPSAP2O60256 369 aa6.9□□□□□ -1.3
UBR4-204ENST00000375254 VPS4BO75351 444 aa6.9□□□□□ -1.3
UBR4-204ENST00000375254 TGM2P21980 687 aa6.9□□□□□ -1.3
UBR4-204ENST00000375254 ALDH1A3P47895 512 aa6.9□□□□□ -1.3
UBR4-204ENST00000375254 MRPS22P82650 360 aaKnown RBP6.9□□□□□ -1.3
UBR4-204ENST00000375254 NCAPHQ15003 741 aa6.9□□□□□ -1.3
UBR4-204ENST00000375254 PPM1LQ5SGD2 360 aa6.9□□□□□ -1.3
UBR4-204ENST00000375254 SLC9A4Q6AI14 798 aa6.9□□□□□ -1.3
UBR4-204ENST00000375254 C8orf58Q8NAV2 365 aa6.9□□□□□ -1.3
UBR4-204ENST00000375254 ADCY4Q8NFM4 1077 aa6.9□□□□□ -1.3
UBR4-204ENST00000375254 NAT9Q9BTE0 207 aa6.9□□□□□ -1.3
UBR4-204ENST00000375254 UGT2B28Q9BY64 529 aa6.9□□□□□ -1.3
UBR4-204ENST00000375254 CHL1O00533 1208 aa6.9□□□□□ -1.3
UBR4-204ENST00000375254 SAMD4BQ5PRF9 694 aaKnown RBP6.9□□□□□ -1.3
UBR4-204ENST00000375254 SNAP47Q5SQN1 464 aa6.9□□□□□ -1.3
UBR4-204ENST00000375254 RAB26Q9ULW5 256 aa6.9□□□□□ -1.3
UBR4-204ENST00000375254 EIF4E1BA6NMX2 242 aaKnown RBP6.9□□□□□ -1.3
UBR4-204ENST00000375254 CCNE2O96020 404 aa6.9□□□□□ -1.3
UBR4-204ENST00000375254 NUP93Q8N1F7 819 aa6.9□□□□□ -1.3
UBR4-204ENST00000375254 ERMAPQ96PL5 475 aaPredicted RBP6.9□□□□□ -1.3
UBR4-204ENST00000375254 FYCO1Q9BQS8 1478 aa6.9□□□□□ -1.3
UBR4-204ENST00000375254 MYL2P10916 166 aa6.9□□□□□ -1.3
UBR4-204ENST00000375254 PORP16435 677 aaPredicted RBP6.9□□□□□ -1.3
UBR4-204ENST00000375254 FGFR2P21802 821 aa6.9□□□□□ -1.3
UBR4-204ENST00000375254 ATP2B4P23634 1241 aa6.9□□□□□ -1.3
UBR4-204ENST00000375254 RPL19P84098 196 aaKnown RBP6.9□□□□□ -1.3
UBR4-204ENST00000375254 GRIK3Q13003 919 aa6.9□□□□□ -1.3
UBR4-204ENST00000375254 TAGAPQ8N103 731 aa6.9□□□□□ -1.3
UBR4-204ENST00000375254 OR7A2PQ8NGA2 310 aa6.9□□□□□ -1.3
UBR4-204ENST00000375254 SNX19Q92543 992 aa6.9□□□□□ -1.3
UBR4-204ENST00000375254 HES6Q96HZ4 224 aa6.9□□□□□ -1.3
UBR4-204ENST00000375254 FAM172BPA6NC97 362 aa6.9□□□□□ -1.3
UBR4-204ENST00000375254 E7EWF7 191 aa6.9□□□□□ -1.3
UBR4-204ENST00000375254 UQCRBP14927 111 aa6.9□□□□□ -1.3
UBR4-204ENST00000375254 DPYSQ14117 519 aa6.9□□□□□ -1.3
UBR4-204ENST00000375254 WDR45BQ5MNZ6 344 aa6.9□□□□□ -1.3
UBR4-204ENST00000375254 C12orf60Q5U649 245 aa6.9□□□□□ -1.3
UBR4-204ENST00000375254 AMACRQ9UHK6 382 aa6.9□□□□□ -1.3
UBR4-204ENST00000375254 ZNF879B4DU55 563 aa6.9□□□□□ -1.31
UBR4-204ENST00000375254 SHOX2O60902 331 aaPredicted RBP6.9□□□□□ -1.31
UBR4-204ENST00000375254 SWI5Q1ZZU3 235 aa6.9□□□□□ -1.31
UBR4-204ENST00000375254 RBM15Q96T37 977 aaKnown RBP eCLIP6.9□□□□□ -1.311e-6■■□□□ 12.7
UBR4-204ENST00000375254 XKR8Q9H6D3 395 aa6.9□□□□□ -1.31
UBR4-204ENST00000375254 SPINK5Q9NQ38 1064 aaPredicted RBP6.9□□□□□ -1.31
UBR4-204ENST00000375254 TRIM49BA6NDI0 452 aa6.9□□□□□ -1.31
UBR4-204ENST00000375254 TRIM49D1C9J1S8 452 aa6.9□□□□□ -1.31
UBR4-204ENST00000375254 TSPAN4O14817 238 aa6.9□□□□□ -1.31
UBR4-204ENST00000375254 ADCY7P51828 1080 aa6.9□□□□□ -1.31
UBR4-204ENST00000375254 WAPLQ7Z5K2 1190 aa6.9□□□□□ -1.31
UBR4-204ENST00000375254 C10orf107Q8IVU9 208 aa6.9□□□□□ -1.31
UBR4-204ENST00000375254 RHOT1Q8IXI2 618 aa6.9□□□□□ -1.31
UBR4-204ENST00000375254 HDHD2Q9H0R4 259 aa6.9□□□□□ -1.31
UBR4-204ENST00000375254 TMEM168Q9H0V1 697 aa6.9□□□□□ -1.31
UBR4-204ENST00000375254 ABCG2Q9UNQ0 655 aa6.9□□□□□ -1.31
UBR4-204ENST00000375254 SNX3O60493 162 aa6.9□□□□□ -1.31
UBR4-204ENST00000375254 PIK3CAP42336 1068 aa6.9□□□□□ -1.31
UBR4-204ENST00000375254 RAB27AP51159 221 aa6.9□□□□□ -1.31
UBR4-204ENST00000375254 RBM44Q6ZP01 1051 aaKnown RBP6.9□□□□□ -1.31
UBR4-204ENST00000375254 hCG_1984214I3L0E3 225 aa6.9□□□□□ -1.31
UBR4-204ENST00000375254 ALDH5A1P51649 535 aaPredicted RBP6.9□□□□□ -1.31
UBR4-204ENST00000375254 CENPCQ03188 943 aa6.9□□□□□ -1.31
UBR4-204ENST00000375254 ULK2Q8IYT8 1036 aa6.9□□□□□ -1.31
UBR4-204ENST00000375254 ALDH16A1Q8IZ83 802 aa6.9□□□□□ -1.31
UBR4-204ENST00000375254 POMGNT1Q8WZA1 660 aa6.9□□□□□ -1.31
UBR4-204ENST00000375254 PRAM1Q96QH2 718 aa6.9□□□□□ -1.31
UBR4-204ENST00000375254 CAB39LQ9H9S4 337 aa6.9□□□□□ -1.31
UBR4-204ENST00000375254 CYP4F11Q9HBI6 524 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms