RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 FRG1Q14331 258 aaKnown RBP9.58□□□□□ -0.88
UBR4-201ENST00000375218 BMP2KLQ5H9B9 411 aa9.58□□□□□ -0.88
UBR4-201ENST00000375218 ALG1LQ6GMV1 187 aa9.58□□□□□ -0.88
UBR4-201ENST00000375218 DRICH1Q6PGQ1 229 aaPredicted RBP9.58□□□□□ -0.88
UBR4-201ENST00000375218 C6orf15Q6UXA7 325 aaPredicted RBP9.58□□□□□ -0.88
UBR4-201ENST00000375218 FAM160B2Q86V87 743 aa9.58□□□□□ -0.88
UBR4-201ENST00000375218 LILRB4Q8NHJ6 448 aa9.58□□□□□ -0.88
UBR4-201ENST00000375218 DDX54Q8TDD1 881 aaKnown RBP9.58□□□□□ -0.88
UBR4-201ENST00000375218 ZNF384Q8TF68 577 aa9.58□□□□□ -0.88
UBR4-201ENST00000375218 NR1H4Q96RI1 486 aaPredicted RBP9.58□□□□□ -0.88
UBR4-201ENST00000375218 AP5M1Q9H0R1 490 aa9.58□□□□□ -0.88
UBR4-201ENST00000375218 CARD9Q9H257 536 aa9.58□□□□□ -0.88
UBR4-201ENST00000375218 ZBTB3Q9H5J0 574 aa9.58□□□□□ -0.88
UBR4-201ENST00000375218 STX8Q9UNK0 236 aa9.58□□□□□ -0.88
UBR4-201ENST00000375218 CCDC151A5D8V7 595 aa9.57□□□□□ -0.88
UBR4-201ENST00000375218 PALMO75781 387 aa9.57□□□□□ -0.88
UBR4-201ENST00000375218 SNRNP70P08621 437 aaKnown RBP9.57□□□□□ -0.88
UBR4-201ENST00000375218 PPM1AP35813 382 aa9.57□□□□□ -0.88
UBR4-201ENST00000375218 PDE1AP54750 535 aa9.57□□□□□ -0.88
UBR4-201ENST00000375218 RPP38P78345 283 aaKnown RBP9.57□□□□□ -0.88
UBR4-201ENST00000375218 PKP1Q13835 747 aa9.57□□□□□ -0.88
UBR4-201ENST00000375218 GKAP1Q5VSY0 366 aaPredicted RBP9.57□□□□□ -0.88
UBR4-201ENST00000375218 TWF2Q6IBS0 349 aaKnown RBP9.57□□□□□ -0.88
UBR4-201ENST00000375218 KIAA1328Q86T90 577 aa9.57□□□□□ -0.88
UBR4-201ENST00000375218 TRIM50Q86XT4 487 aa9.57□□□□□ -0.88
UBR4-201ENST00000375218 C7orf31Q8N865 590 aa9.57□□□□□ -0.88
UBR4-201ENST00000375218 ATG16L2Q8NAA4 619 aa9.57□□□□□ -0.88
UBR4-201ENST00000375218 NEDD1Q8NHV4 660 aa9.57□□□□□ -0.88
UBR4-201ENST00000375218 SLC2A13Q96QE2 648 aa9.57□□□□□ -0.88
UBR4-201ENST00000375218 SDHAF3Q9NRP4 125 aa9.57□□□□□ -0.88
UBR4-201ENST00000375218 EHD2Q9NZN4 543 aa9.57□□□□□ -0.88
UBR4-201ENST00000375218 NEMP1O14524 444 aa9.57□□□□□ -0.88
UBR4-201ENST00000375218 PDE6AP16499 860 aa9.57□□□□□ -0.88
UBR4-201ENST00000375218 ARF4P18085 180 aaPredicted RBP9.57□□□□□ -0.88
UBR4-201ENST00000375218 IFI35P80217 286 aaPredicted RBP9.57□□□□□ -0.88
UBR4-201ENST00000375218 PLS1Q14651 629 aa9.57□□□□□ -0.88
UBR4-201ENST00000375218 ZBTB38Q8NAP3 1195 aaPredicted RBP9.57□□□□□ -0.88
UBR4-201ENST00000375218 TMIGD2Q96BF3 282 aa9.57□□□□□ -0.88
UBR4-201ENST00000375218 DACH2Q96NX9 599 aa9.57□□□□□ -0.88
UBR4-201ENST00000375218 RPRD1AQ96P16 312 aaPredicted RBP9.57□□□□□ -0.88
UBR4-201ENST00000375218 CDK5RAP1Q96SZ6 601 aaKnown RBP9.57□□□□□ -0.88
UBR4-201ENST00000375218 TTLL2Q9BWV7 592 aa9.57□□□□□ -0.88
UBR4-201ENST00000375218 STK31Q9BXU1 1019 aa9.57□□□□□ -0.88
UBR4-201ENST00000375218 SMARCAD1Q9H4L7 1026 aa9.57□□□□□ -0.88
UBR4-201ENST00000375218 FBXO40Q9UH90 709 aa9.57□□□□□ -0.88
UBR4-201ENST00000375218 hCG_1807616A0A1W2PRN6 198 aa9.57□□□□□ -0.88
UBR4-201ENST00000375218 IRAK2O43187 625 aa9.57□□□□□ -0.88
UBR4-201ENST00000375218 KRT86O43790 486 aa9.57□□□□□ -0.88
UBR4-201ENST00000375218 CPEP16870 476 aa9.57□□□□□ -0.88
UBR4-201ENST00000375218 SCARF1Q14162 830 aa9.57□□□□□ -0.88
UBR4-201ENST00000375218 PTK2BQ14289 1009 aa9.57□□□□□ -0.88
UBR4-201ENST00000375218 OXLD1Q5BKU9 147 aa9.57□□□□□ -0.88
UBR4-201ENST00000375218 UNC45BQ8IWX7 931 aa9.57□□□□□ -0.88
UBR4-201ENST00000375218 TSNARE1Q96NA8 513 aa9.57□□□□□ -0.88
UBR4-201ENST00000375218 SELENOSQ9BQE4 189 aa9.57□□□□□ -0.88
UBR4-201ENST00000375218 FARSBQ9NSD9 589 aaKnown RBP9.57□□□□□ -0.88
UBR4-201ENST00000375218 ZMYM5Q9UJ78 669 aa9.57□□□□□ -0.88
UBR4-201ENST00000375218 TTC7AQ9ULT0 858 aaPredicted RBP9.57□□□□□ -0.88
UBR4-201ENST00000375218 ERVK-19Q9WJR5 959 aa9.57□□□□□ -0.88
UBR4-201ENST00000375218 PCDHGA2Q9Y5H1 932 aa9.57□□□□□ -0.88
UBR4-201ENST00000375218 FER1L6Q2WGJ9 1857 aa9.57□□□□□ -0.88
UBR4-201ENST00000375218 FBXO24O75426 580 aa9.56□□□□□ -0.88
UBR4-201ENST00000375218 TSPAN9O75954 239 aa9.56□□□□□ -0.88
UBR4-201ENST00000375218 PPARGP37231 505 aaPredicted RBP9.56□□□□□ -0.88
UBR4-201ENST00000375218 EIF4A3P38919 411 aaKnown RBP9.56□□□□□ -0.88
UBR4-201ENST00000375218 CLCN4P51793 760 aa9.56□□□□□ -0.88
UBR4-201ENST00000375218 KPNA1P52294 538 aaPredicted RBP9.56□□□□□ -0.88
UBR4-201ENST00000375218 NCBP1Q09161 790 aaKnown RBP9.56□□□□□ -0.88
UBR4-201ENST00000375218 RPUSD3Q6P087 351 aaKnown RBP9.56□□□□□ -0.88
UBR4-201ENST00000375218 AAGABQ6PD74 315 aa9.56□□□□□ -0.88
UBR4-201ENST00000375218 NUDT13Q86X67 352 aa9.56□□□□□ -0.88
UBR4-201ENST00000375218 KRT73Q86Y46 540 aa9.56□□□□□ -0.88
UBR4-201ENST00000375218 ZDHHC17Q8IUH5 632 aa9.56□□□□□ -0.88
UBR4-201ENST00000375218 FAM20CQ8IXL6 584 aa9.56□□□□□ -0.88
UBR4-201ENST00000375218 C3orf58Q8NDZ4 430 aa9.56□□□□□ -0.88
UBR4-201ENST00000375218 LINS1Q8NG48 757 aa9.56□□□□□ -0.88
UBR4-201ENST00000375218 SHDQ96IW2 340 aa9.56□□□□□ -0.88
UBR4-201ENST00000375218 METTL22Q9BUU2 404 aaPredicted RBP9.56□□□□□ -0.88
UBR4-201ENST00000375218 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.56□□□□□ -0.88
UBR4-201ENST00000375218 PLSCR4Q9NRQ2 329 aa9.56□□□□□ -0.88
UBR4-201ENST00000375218 DENND2AQ9ULE3 1009 aa9.56□□□□□ -0.88
UBR4-201ENST00000375218 ARHGAP26Q9UNA1 814 aa9.56□□□□□ -0.88
UBR4-201ENST00000375218 KLHL2O95198 593 aa9.56□□□□□ -0.88
UBR4-201ENST00000375218 CASP5P51878 434 aa9.56□□□□□ -0.88
UBR4-201ENST00000375218 SLC12A3P55017 1021 aa9.56□□□□□ -0.88
UBR4-201ENST00000375218 NRG1Q02297 640 aaPredicted RBP9.56□□□□□ -0.88
UBR4-201ENST00000375218 CTC1Q2NKJ3 1217 aa9.56□□□□□ -0.88
UBR4-201ENST00000375218 ERCC6LQ2NKX8 1250 aa9.56□□□□□ -0.88
UBR4-201ENST00000375218 BSNDQ8WZ55 320 aa9.56□□□□□ -0.88
UBR4-201ENST00000375218 SMARCE1Q969G3 411 aa9.56□□□□□ -0.88
UBR4-201ENST00000375218 INTS12Q96CB8 462 aaKnown RBP9.56□□□□□ -0.88
UBR4-201ENST00000375218 PARD6BQ9BYG5 372 aa9.56□□□□□ -0.88
UBR4-201ENST00000375218 NTN4Q9HB63 628 aa9.56□□□□□ -0.88
UBR4-201ENST00000375218 EVA1BQ9NVM1 165 aa9.56□□□□□ -0.88
UBR4-201ENST00000375218 DBF4Q9UBU7 674 aaPredicted RBP9.56□□□□□ -0.88
UBR4-201ENST00000375218 ZNF609O15014 1411 aa9.56□□□□□ -0.88
UBR4-201ENST00000375218 ABLIM1O14639 778 aa9.56□□□□□ -0.88
UBR4-201ENST00000375218 MYCLP12524 364 aaPredicted RBP9.56□□□□□ -0.88
UBR4-201ENST00000375218 PDGFRAP16234 1089 aa9.56□□□□□ -0.88
UBR4-201ENST00000375218 SPAG1Q07617 926 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms